© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0239400.1
AGATGATAGAACCACCACACTTTTTTACATTTCCAACCCCACTGGTCGGCAGCCATCTACAATTTACATGACAGGAAAGAATGAATAAATACTACGGAGAAGCTTTTGTTGCTGCAGGCTGAGGCTGCAGACCAAATGTGCTAGCTTAGCTACTGGACATGAAGGATTCATGCTTCATGAACCGAGCAGAAGAGAGACTACTTGACACTACATGTTACACATTTACAATCTAGGCACACGGAGCGAGATGAGCTTCCATGGTGGTATCACATCCTACTTGAAAAGGAGTAGAGCAGCACAACGAGCCCACCCTGTGAGCGCTGCTCACTCAATGATCTCCACTAGTTACCAGTGACAATGTGGCATTGAGCTTCTCATAAGGGGTTGCTGAACAAAACCAGTTAGGATCTAGTGCTCCGGCTTCGGGGTGCGTGTGACGAATTGCGTTACAGCATCCTGGTTTACATGAAAAATGAACCTCATATCCTTTATCTCAATTAACGAATCTGAACTTAAGATGATGCGTTTGCAGCTTGGTACTTCCTTGCTATTAACAAAAATTGAACATTTCCCAATGTTTTTGATATGAAAAGAACCAGCTTCATCCATCTTGATAACCGCCTAATTTTCATAGCACACATGGATTTATATAAACACAAAGGCCCAAAGAAAAAGAGAAAAAGAAGCAGATGTGGTAAAACATAATCCCAGGATAAGTTTTTTTAGGGTACTGCACGAGCAAACAATGGGGGTTAGGATGTAATCAGATAAGCCTACTATTAATTACATGAAAACAGTTGCTAGTTTAAGCAGAACGACATAATCCGATCAAGCACTAGAAAAGTTATGCTGCCTAGTTGTATGTTGTTTAGGACCATTTCCATGATTACAGACCTGTAGTTAACATAAATGACTGGAAAATGTATTTTAAATTAGTCATAACAACTCACTAACCTAAGGCTCAGAATTAGTGATAAATCCTACCTTTCATCATGGATCGACGCTATGTAATTTTCTTGCTTGTACAAAAACCATATAAATGTCCCATATTTTAATGTACCGTGTGGGCCTCCCTCACTGTCTACGAGATATTTTGTTTGCCCTCCCTTCTTTTCCCAAATCAACATCAACTTTTATGTCTTCTGTCTCTCTTCCAAGAGTCACCTCACTGTCCTTCATATAATATCTCAGGTGCAGTCCATAAATAACTGCGAAGGCACCTTTGGACACAATGGCTCTGTTCATATAAGACCTGGCACTCTGCTCCAGTCGTATCAATGATTTCCTGCTTTCTGGATGCTGAAACCTGGAAACTCCTGGATGCTGCTCAGAGTCCTGAACCCATGGGATTAAATCTTGATCAAGTATCAAAGCTTCTAGATCATAGTAGTTTGGAACATCATTTTCATTGTCAGAGCATTCTTCTACTTGATTTGATACAGGAACAGTTGTAATGGGGTCTTGAAGACCCAAATCTGGCAATTCATGTGGTGGAATGCAGTTCTGTAGAGGAGCCCCATCTCCTAATTCTGGTTGATTATCATGTGAGTTGTAATTCATGTGATCGGGCACTTCAACTGAATTGGGCAAAGGAAAACTCAGTGAGTCATCAAAGTTATTCTGCTGTTCTAAATGGCAAGGTGATCCTTCAGCAAATACAGCAGCACTGATAGAGGGTAAATTTGACGCACATGAGTTTGCATCATTAGTGTCAACGTGACAATGCACGAGTGTACCAGCAGTTGAAGGACCTTCTGATGGTTCAGCTCCTAGTGGGACACAGCCTTTACTAGGTGCTGTTGAACCTTCTTTTTGTTCTGAGGTGGGTGGGCTGAGATTCATTGGTTGTGAAGAAGGTTCAGTATTTGTCATATCTTCCCTCTTTATTAGGGCTTTGTCACTCACATTGGAATGTTCGACATTTGATGCAGGGCTAGTTGCAGGGGAAACCAAACAGGTATTGTGCTCAGAGTTCTGGCCAAAATCAGTAGCAGAGCATTGTAGAGGAGACTCGCCAGGAAAAATAACATCGTCATTGCAAGGAATTTCAGGATCTTCTGTGTTCAACACACATTCAACAAACCGACCAGGATAAGGCACTTCCAATGAAGTAGGAACCGAGATTATCCCAGAAACATCTACATTATGCTTCACATGATCAGGATCTGTCTGATCATAGCAAATGTTGGCCTCATCAGGATGCAACAGATTTTTCACATGATCAGGATCATCTAAATCCTCCTGATTTGTCTCATGTGGAATATTCAAAAAGTTTTCACCATTCAGGAGATCTAAATCTTCACTGTTGCTGAAATAGGGAAAATCCATGAAATCACCTTCTGTTATGGCTGCATGATCTAAACCAGCTGCACAAATCCCACCATCTAAATTTGGTTGCAATGCTAGAGGGTCACTGTTGTCTGTCTTTATTTTCTTATCATCGTCAAGAGTAAATGTGCCTCTTTCGTCAACCTCAGTCCAGATTGAACCAACTGGTGTTTGAGAACCCTCTGGTTGGCCAATCACCTGGAGTGAGCCAGGTTCTTGCATTCTTGAACTGCTGTTCACAGGGAAATGGACATGTTCAACTCCACAGTGATCAGCAATCACTATTGTCTTTGATTCTGTTACTTTGCTGCCACATTGATTGCTAGAGCCCAGATTCTGGAACTGCATGGAACCCTGAAAATCTGTTATACCCTTTAAAGAAACATTGTTCCCTTCATTAGTATCAGGGTCCTTTCGCGTGTATGCATCTTGCTCATATATTTGACTTACATCAGAATAGCCATACGGGACACTATTAGCAATATCTCCACCTTTAACCATGCTATCAGTCTCAGCATGCTTTGCAGGGAAAGAATGTCCATTCATTCCAACAAACATAGTTTGTCCACCATTGTAACTTCCATCCTGTTGCCCAAAGCAGTTCATTGTACTTACCCCTGGTTCTGTATTATGAACCACATGGTGACCTTGTGAATGTTTATCTAGGCCTCCACATACACACTGCCCGCCATTCATTGTACATGAACAAGGGTCAATAAGAAAACCAAGGTCGACAGTACTACATGGTTCATTGCGGACTCTCTTTCTCATCGCATAATATTGATTCTTCACACTATCTATTTTCCGTTTCTGGAATGACAAATCCTTTTGCTTTGCGTTGATAACTTTAGCCTTCAGAGGATTGGAAGTGGAAAGATCATTCTCATACTCAACCATACGAGCAGAAGCTTGTGTTGAGATCTCTGGGTCATATAGCAGAGAATTCCAACGATCCTGTATTTCTTTAAGAGTGAATTTACGGGAGAAACATACGGCTCCTTTTGCCAAGGCCTCCAATGAGGCACCAGTCTCGACGGCGTTCTTGAGGAGGATGTCGTCCTCGACGAGCCAGATCGCCGACGACGTCGCCGCCGCCAAGGCGCCCATGCCCACCACCGCCGCCGCCGCCGCTTCCGATGGGTGAGGGAGCAGGAACCGTGTGGTTTTAGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0239400.1 | 3 | 33394432 | A | G |
| Osa03LNT0239400.1 | 3 | 33396288 | A | G |
| Osa03LNT0239400.1 | 3 | 33396588 | C | T |
| Osa03LNT0239400.1 | 3 | 33397505 | C | A |
| Osa03LNT0239400.1 | 3 | 33397639 | G | A |
| Osa03LNT0239400.1 | 3 | 33398006 | C | G |
| Osa03LNT0239400.1 | 3 | 33398363 | A | G |
| Osa03LNT0239400.1 | 3 | 33401185 | G | A |
| Osa03LNT0239400.1 | 3 | 33401663 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0239400.1 | osa-miR5532 | Cleavage | 4.5 | 18.441 | 1 | 22 |
| Osa03LNT0239400.1 | osa-miR5797 | Cleavage | 3.0 | 13.171 | 1 | 21 |
| Osa03LNT0239400.1 | osa-miR5797 | Cleavage | 5.0 | 10.154 | 1 | 21 |
| Osa03LNT0239400.1 | osa-miR5821 | Translation | 5.0 | 19.646 | 1 | 21 |
| Osa03LNT0239400.1 | osa-miR395f | Cleavage | 3.5 | 13.827 | 1 | 21 |
| Osa03LNT0239400.1 | osa-miR397a | Translation | 4.5 | 21.182 | 1 | 21 |
| Osa03LNT0239400.1 | osa-miR397b | Translation | 5.0 | 21.182 | 1 | 21 |
| Osa03LNT0239400.1 | osa-miR535-3p | Translation | 4.5 | 16.92 | 1 | 21 |
| Osa03LNT0239400.1 | osa-miR814a | Cleavage | 4.5 | 19.841 | 1 | 22 |
| Osa03LNT0239400.1 | osa-miR814b | Cleavage | 4.5 | 19.841 | 1 | 22 |
| Osa03LNT0239400.1 | osa-miR814c | Cleavage | 4.5 | 19.841 | 1 | 22 |
| Osa03LNT0239400.1 | osa-miR169r-3p | Cleavage | 4.0 | 17.308 | 1 | 21 |
| Osa03LNT0239400.1 | osa-miR1862f | Cleavage | 3.5 | 12.394 | 1 | 20 |
| Osa03LNT0239400.1 | osa-miR1862f | Translation | 4.0 | 20.561 | 1 | 20 |
| Osa03LNT0239400.1 | osa-miR1862g | Cleavage | 3.5 | 12.394 | 1 | 20 |
| Osa03LNT0239400.1 | osa-miR1862g | Translation | 4.0 | 20.561 | 1 | 20 |
| Osa03LNT0239400.1 | osa-miR2873b | Cleavage | 5.0 | 11.984 | 1 | 21 |
| Osa03LNT0239400.1 | osa-miR5150-3p | Translation | 5.0 | 24.882 | 1 | 24 |
| Osa03LNT0239400.1 | osa-miR5491 | Cleavage | 4.5 | 16.29 | 1 | 21 |
| Osa03LNT0239400.1 | osa-miR5492 | Cleavage | 4.5 | 14.404 | 1 | 21 |
| Osa03LNT0239400.1 | osa-miR5507 | Cleavage | 3.5 | 11.775 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0239400.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1618 | G164 |
| Osa03LNT0239400.1 | 3 | Qbp1 | Resistance or Tolerance | Insect resistance | R1925 | R2443 |
| Osa03LNT0239400.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0239400.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Osa03LNT0239400.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Osa03LNT0239400.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0239400.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)