© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0241300.1
TGTAGAAAGATTTTATTTAAAAAAGATATTATTTAGGAGTTCGACAAGCACGTGCATTCATTCATTAGTAGTTCAGCACCAGACTGGATTCTCCGTTCACCCATACATAGCACAGGGACCTGGCTTCTCAGATGAGAAATTCCAGTTTTCAAGTAGCGTTCGTAGAATTTTCCAGGAAGTATTAAGTGTAAGAACCATCTTCTAGATACTATATAGCCACCCACGATAAACTGACAAGTCGGCAAACTTACAGACAAACTAATACTACTATATATACTAAGATGGCACCAAAACAAAACAAGGAATTGTCTTGTTCTAACTGACTATTTCAAGGTAATGCTGAATCGCACACCTCATATGACCTCCCAGTGAGCGACTCGAAGATACTCTTTTGATGCTTTAGCATGTGGCGCACATAGTACAGACCACGAAAATCTGCTATGAAAAACGCCTCTAGCAACCACAGATGCAAATGGAAGACAACTGACAGCTCAGGTGGTTCTGTGGATCCTGGTTGACATGGCAAAAAAATGCAAGGCCCTTTAGGGGGCATGGGACGAGATGGACTCTGGGTCGTTCATCCCAGCGAGAAATGCAATGAAGACCCACAGCATTAGAACACCAATGATGGCAGCCCTTATGGCATTCTCGCAGCTATAAGGAGATGGAAGCTCCGCCTCATCAAAGTTCATGCTTGCGACAGGTGATCCATCATCAATGGTTATCTGGCGAGGTTGGCTCTTGCTGCCTTCCCCTGCCTGTATTACTGAAATATTACGCGGCTTCTCACATTGCGGGCAGCTGCATTTGCCACCAAGAAAAGTTGGCACAATCTGCAAGAACTCGGCTAATGTCTTCTTATATGATTCTCCCTCAAAACGCAACTTCTGCTTTGTGGATGGTTTCAGAACCTGAATAAGAGTCTGCGCAATTACTCTGACAACAGGAGGAAGACGCACAATAAATAGTACCCCAAGACGATTTGGATAGTTTTCTTGAACTATAGTGATAAACGACCTCATCATTTGCATTGGAAATCTGAATGGAGAAATCCCATGACAATCCAGCAAAACAGTTATTCTCGGATCTTCTTTGTTGGTCAAGTATACAATACCATTGTCGATTTGAGAAACTACTGCTTGCCCAAACCGAGGTCTATCAGAAGGGGCTAGACTAGAGCATGCAAGACCAAGACGGACTATTAAACAGGGCCGAAGCATAGTATCGAATCCATGCCAAAAAACTAAATGGGACCACTTCTCGAGTTCGTGCAATGTAAGTATATGGAAGGTTTCCCTCCAACGAATTGTCTTCTTAACTGAAGAGAGCAAACTTGAAAAGTCACCATTGGCTGCAATGTAAAATCTGCGTAGTTCATCCTCATTGAACCTTTCAGGCAAAGTGATGCCTTGTTTCTCAAGTTCCTTGAACAGTGATATGAGCCAGTTATCTGGCTCGGTATCCTTTGTGCCATCAGCAACATCCCTTATACCAGAAGTTGATGCTGTTTCATCTGATTCAGAAGGTACATCAGGAGCTTCTGTATTGCTACCCAATTCATCATTGCGCTTAGAGGACCGGTCACATAATGTTGTTGTGACAGAAAGAAACAACAGTGGTGTCGATAATTTCTGAATGCCTTGCACAATAAATTTGAGTGGCGCCCACTGTTGAATCCACCTAAATGGAGGGTACCCAAGAACTTGCAATGCTTGAATAGAATTCCATATAAAAGGGCATCTTGCTTTTGAAAATCTTCTTACTACTTCCAAGGCAATAACCTTTACCAAAAAAGATGCCAGATGACTTGTAGACTCCCCGCTCAAGATTAAATGTTTTCCTGGCACGATCTGCTTGACTGTCTTGGGTGAAATGGCTTTTGCTGGAGAAGCAACCAATGCACCCTGGTACTTCCTGTCACTGCCTGGTTTGCTTGATGACTGGAAGTTTTTGCTTGAACTGGCCATCGTTATGATTTATGAAGCATAGGCATAAACAGAATCTAATCCCTGGTTTTGAAATGTATCACCACATCAATCAACAGTTACAAAGCAGTTGCATCGAACCAGCAGGAAATGGAGCCTACGAGCAATCCAAGCATGCTGCATTAGGGCTTCCGTACCAACCACAAATGAAATCACGCTGCAGAATCCATCCCCCGCCTGTCAACTCCTTCGAGGTGGTGGTGGTGGAGCCGCTCCTCCTCCGTCGCCGGTTAGGGTTCGATCTTGCCTTCCACCTTGCGCATCCGGGGATGGGAGGGAGATCGATGGTGGAGACGGATCTAGGCAGAGGTGGGTGGGTGCGGGGCGGTGGCGGTGGGCAAGAGAAGGGAAGGGAGCGAGGCGAGATGGGGAGAAGGGAAGGGGCAGAGGACACGCGCACGGCGCACAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0241300.1 | 3 | 34439848 | T | C |
| Osa03LNT0241300.1 | 3 | 34440486 | A | T |
| Osa03LNT0241300.1 | 3 | 34441859 | C | T |
| Osa03LNT0241300.1 | 3 | 34441861 | C | A |
| Osa03LNT0241300.1 | 3 | 34442845 | A | C |
| Osa03LNT0241300.1 | 3 | 34443068 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0241300.1 | osa-miR5797 | Cleavage | 4.0 | 13.85 | 1 | 21 |
| Osa03LNT0241300.1 | osa-miR169a | Translation | 4.0 | 19.371 | 1 | 21 |
| Osa03LNT0241300.1 | osa-miR396a-3p | Cleavage | 5.0 | 12.372 | 1 | 20 |
| Osa03LNT0241300.1 | osa-miR396b-3p | Cleavage | 5.0 | 12.372 | 1 | 20 |
| Osa03LNT0241300.1 | osa-miR169b | Translation | 4.0 | 19.371 | 1 | 21 |
| Osa03LNT0241300.1 | osa-miR169c | Translation | 4.0 | 19.371 | 1 | 21 |
| Osa03LNT0241300.1 | osa-miR166i-5p | Translation | 5.0 | 24.659 | 1 | 21 |
| Osa03LNT0241300.1 | osa-miR396e-5p | Translation | 5.0 | 19.252 | 1 | 21 |
| Osa03LNT0241300.1 | osa-miR396e-3p | Cleavage | 5.0 | 13.368 | 1 | 24 |
| Osa03LNT0241300.1 | osa-miR1425-5p | Translation | 4.5 | 18.67 | 1 | 21 |
| Osa03LNT0241300.1 | osa-miR1431 | Translation | 5.0 | 6.512 | 1 | 21 |
| Osa03LNT0241300.1 | osa-miR1431 | Translation | 5.0 | 18.923 | 1 | 21 |
| Osa03LNT0241300.1 | osa-miR1435 | Translation | 4.5 | 7.074 | 1 | 20 |
| Osa03LNT0241300.1 | osa-miR396f-3p | Cleavage | 3.5 | 13.368 | 1 | 24 |
| Osa03LNT0241300.1 | osa-miR396f-3p | Translation | 5.0 | 18.952 | 1 | 24 |
| Osa03LNT0241300.1 | osa-miR2876-5p | Cleavage | 4.0 | 22.504 | 1 | 21 |
| Osa03LNT0241300.1 | osa-miR2928 | Translation | 5.0 | 10.953 | 1 | 20 |
| Osa03LNT0241300.1 | osa-miR2930 | Cleavage | 4.5 | 13.689 | 1 | 22 |
| Osa03LNT0241300.1 | osa-miR5161 | Cleavage | 4.0 | 20.086 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0241300.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Osa03LNT0241300.1 | 3 | spp3.1 | Morphological trait | Panicle/flower | RM130 | RG1356 |
| Osa03LNT0241300.1 | 3 | yld3.2 | Morphological trait | Seed | RM130 | RG1356 |
| Osa03LNT0241300.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Osa03LNT0241300.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0241300.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0241300.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1618 | G164 |
| Osa03LNT0241300.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0241300.1 | 3 | Qbp1 | Resistance or Tolerance | Insect resistance | R1925 | R2443 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)