© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0241600.1
GGTCGATTTTATAAATTATTAATAATTGAACAAATCCTCATTTACATCAACATATTATACCACGCGGCCAGCCCTGCGGGCGATTCATGGCGATTCAGCTGGATGTGCCGAGAGCCCAAGCCGAATCCAACCCCCCACAGTGCTTGGTTGATATTGTACAGTAGCAACTGGGGGAAGAGGAGTAGAGTAGCCGCAAGAACACCTCTCAGCTCAAGGAAGGCATGGGAAGAACCCCCTCTATACGTTTTGTTTCACTAGCCTACTATTGTTTCTATTTACACGCAGGATCTCCAAATCCTGCCCTCCAAAGAGATGACGATGACAGATACATCGTCATGGTATCGCCGACGATCACCATGTGGTATCTCGATCAGTTCATGAAAGTCCATTCCTGCTTTGTTGGCAGCACGGAAAAGAACTTCCTCCACAAGATGTTGGGCAGGGTCGCCTTCAGGGGTTGTTGCGATGAACATTTCGACCTGAGCAACTGCCTCCTCGTTGGTGAAATACTGGTAAAGTCCATCTGAAGATAATATCAAGAATCTATCCCTTGTGCTGAGCTTATGATGAAAAAGGGATGGATTGCATGATATGTATGGGGAGGACCCAACGTAATCAATTCTGAACATCTCCAGGAGTGCATCATTCCACTTGGGCTGTTAAAAAAGAGAGAGAATTGTGAGATCAAAATGCTAAGGAATTATGATATAAGGTGCAGACAGAGAGCAAAAACAAATGATGCATGTATTGTTCGCTATGGATTTGCTTGTAAAATTAACTATTTGCAACTTCCAACCAGGCTATCTGAAAATTGTACCGACAACTAAATCAGTAGAAAGGGCTGCCTCATGCACTTGTTCAATTCTCTGTGCTGCTTAACTTTGGGGGATTTCTTCATTGACAAAATATCGCAGATCGCCATGTCTGTCTCATCAGATAGCTCACTTTATGTCCAAGAAAGAGACTTCCCTCTTGCATAGCAGCAAGATAGATTTGTGCAGTTGACAATAGAGAATAGTTCTTCGCATGGGAGGAGAAACGTACCTTCCTTCAAAGCCACTCAACTCACTCTTTTCTGGCCACATTTTAGTACTGCACAAGCAGATTCTTTGTACTTGGACAGAAGCAAAAGAAACTTCATTTTCTCTTGGAGCAGCTTCTCATTCAAAATTTTGAACTGGCTATACACGCGGTGACTCAAGAATTTAACTAATTAGTTTTCATGCGTTGAAGTTTTTGCCCATTGAAATTAGCATATGGTTTATGATGTCCCCGTCAGACATGGTCAGTTTCAGTGTAGGATGGTCATATTTCTCACCCCAAAGAAGTGAGAATTTAGAGTGGCTCACTTTACTTTTCAAACTTTGGACCAATTAGACCAGATCCAGTTTTCCTTTTTCTGACCTAGTTTAATTATGACCTTAATTATGTGTTTGACTCAGGATAGCAGCAAAACTGACCTTAATTATTCCGCTCCTGGTATAATCAAGTTTGGACCGTATGCTTTATCATCAATACAGATCCCAAATTCAAGGAAGGAAGTCAGGTCACATACTTATTTCATACATTGACTAATTGTGTCATTCTGAAATTGCATATTACTTGCCAAAAAATAAATCCACATACGCAACTTTGAAACTTGGCCAATGGCAAAACGCTTAATCATAACGGAGCACAAAAAAATGTCTTTCTGCAAAAAAAAAGGGCATATTCAAATGAACTAACCTGTTTCAAAAACCCAGCACCAAATGCTCTGGTCACCTTCAGCGAGCCCTTCACGCGATCCTTGGAGATGGCAGATGGATCATCAGGATGCTCGTTTCGTATTCTGATTACTTCCTCTTCCACTGAAGTGCTGTGATCCGACGTGAGCTGCACGGCCGACAAGCATGGCGGGCAATCCCCGACTGATCCATCGAATGAACCCTGGCTGATCTGCTCGAGATCGACGCTGTCCATTGTTGCCAACACAGCCCGGCTATCGCCAACATTCATGATGTACATGTCCTCTCCTTTCATGAGCATGGCAAGAACACAAGAGCCCATGAGCGCAAGCTCAGGGAACTCGCCGACCATCTTGTCGGCGATGTCCAGGTAAGCCTCCTCGGTCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0241600.1 | 3 | 34475877 | A | G |
| Osa03LNT0241600.1 | 3 | 34475658 | A | T |
| Osa03LNT0241600.1 | 3 | 34475769 | T | C |
| Osa03LNT0241600.1 | 3 | 34476308 | T | C |
| Osa03LNT0241600.1 | 3 | 34476694 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0241600.1 | osa-miR5143b | Translation | 4.0 | 20.132 | 1 | 24 |
| Osa03LNT0241600.1 | osa-miR6249a | Cleavage | 3.5 | 13.274 | 1 | 21 |
| Osa03LNT0241600.1 | osa-miR6249b | Cleavage | 3.5 | 13.274 | 1 | 21 |
| Osa03LNT0241600.1 | osa-miR156a | Cleavage | 5.0 | 14.381 | 1 | 20 |
| Osa03LNT0241600.1 | osa-miR156b-5p | Cleavage | 5.0 | 14.381 | 1 | 20 |
| Osa03LNT0241600.1 | osa-miR156c-5p | Cleavage | 5.0 | 14.381 | 1 | 20 |
| Osa03LNT0241600.1 | osa-miR156d | Cleavage | 5.0 | 14.381 | 1 | 20 |
| Osa03LNT0241600.1 | osa-miR156e | Cleavage | 5.0 | 14.381 | 1 | 20 |
| Osa03LNT0241600.1 | osa-miR156f-5p | Cleavage | 5.0 | 14.381 | 1 | 20 |
| Osa03LNT0241600.1 | osa-miR156g-5p | Cleavage | 5.0 | 14.381 | 1 | 20 |
| Osa03LNT0241600.1 | osa-miR156h-5p | Cleavage | 5.0 | 14.381 | 1 | 20 |
| Osa03LNT0241600.1 | osa-miR156i | Cleavage | 5.0 | 14.381 | 1 | 20 |
| Osa03LNT0241600.1 | osa-miR156j-5p | Cleavage | 5.0 | 14.381 | 1 | 20 |
| Osa03LNT0241600.1 | osa-miR156l-5p | Cleavage | 5.0 | 14.381 | 1 | 21 |
| Osa03LNT0241600.1 | osa-miR166g-5p | Cleavage | 4.5 | 13.185 | 1 | 21 |
| Osa03LNT0241600.1 | osa-miR418 | Cleavage | 3.5 | 7.595 | 1 | 21 |
| Osa03LNT0241600.1 | osa-miR810a | Translation | 4.0 | 20.26 | 1 | 21 |
| Osa03LNT0241600.1 | osa-miR1866-5p | Cleavage | 5.0 | 18.405 | 1 | 24 |
| Osa03LNT0241600.1 | osa-miR1877 | Cleavage | 4.0 | 15.142 | 1 | 24 |
| Osa03LNT0241600.1 | osa-miR2871a-3p | Cleavage | 4.5 | 16.485 | 1 | 21 |
| Osa03LNT0241600.1 | osa-miR2871b | Cleavage | 4.5 | 16.485 | 1 | 21 |
| Osa03LNT0241600.1 | osa-miR5143a | Translation | 4.0 | 20.132 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0241600.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1618 | G164 |
| Osa03LNT0241600.1 | 3 | Qbp1 | Resistance or Tolerance | Insect resistance | R1925 | R2443 |
| Osa03LNT0241600.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Osa03LNT0241600.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0241600.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Osa03LNT0241600.1 | 3 | yld3.2 | Morphological trait | Seed | RM130 | RG1356 |
| Osa03LNT0241600.1 | 3 | spp3.1 | Morphological trait | Panicle/flower | RM130 | RG1356 |
| Osa03LNT0241600.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0241600.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)