© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0242500.1
AGAACAATGCAATTTGCAAAGAATTGGATTAATAATTTATTGAGTTTTTACATAATTTACAAATCATTTGTTATTGTATCTACATTATCGTCTTTGAGCAGCTGTTCCAATAATGATTCCATTGTGCTTATGTAACTAGGCATGTAATGCTCCTTTATCATGTTTGGAGCTAGCCTTATTTTCCCATACAAATCTCTTGGCGTTTCATAAATGCTAATGATCTCATTGCTGCTGGATCCCTCACCAGGATTTGGGTCAGGTGAGGCCATTGCAACCATGTGAATAATTCTTCCAGGAGGGAAAAACTGGCGCGAACTGCAGGTTGGTAGCGGTTCTTTCAGCTTGTCTTTGATATCACAGTTCTGCTTCAGTGATTCTGGTTCCTCCTGCCCTGTCAAGGATGATTGTTCTTGTTCAGTGTCCAGTGATCCATTGATGTTCACATCCCCTTGTGCTGCAAAGCCTGATCCAGCAACAGACTTTGTACTGATAACATTATCGTTGCTAGATAGTACAATCTTTTCTTCAGAGGTAACAACTGATACAGCTGAAAAGTCCTGCTCTGTATTAGCAACGAGGTCCGTTTGATGCTGGTTGCAGTCTGTGCTTAGCCCATTTGTTACAGGCTGCGTGATTTCGGGGACATGTTTGAGCAAGGGCTCAGATATGCTAGAATCAGGATCTGTGTTCTTCTCTGTTGGATGAGATACTGACAGCATATGAGACTTTATGAAAGCTACACGCTTACTTATTGCCGTAAATAAGCTAAAGTGAGCTTGATCCTGCTCATCATCTAGCTTTGATGATACCATTACCTCAGCTCGCAGGTTCTCAGCAGAAACTTTTGAAAAGGCCGGGACCACATCATTTCTGTTGATGAGAGAAGTGACAAATTCTTTGCCCGACTCCGCCAGCTCCCATGACATACAGGCAGGAGGAGCAAATGCCAGACACGTGCACGATGAGAACTCATGATGCTCATGAAGAATGTATGTCAGAATTGCTCCGATACCTGCTCCCATTGAATGCCCAATGACCTTTATTTGATAATCAGGGAATTCTTGTACTGCCTTGTGAAGATGGGGCTTGGCAAGGTTAGCAATCCAACGAGCTGCAGCAAGCATCCCACAATGTGCATATCCTAAAACCACGTTGCTGATTTGTCCTTCACTTAAAACTATATGGTGAAAAGGAACCTCAGCAGCAGTTGCGGCTGTTAGGCGCTCCTTAGTACTGATAGCACCCCGAATGAAAAGCAGAAAGCACTTGGATTTTTTGTCACACACAAGCGCGAAAGAAGGTTGCATAAGTCACCCTCGCCCTAGCCTTGTGAATAAGAATGTCTTCTTGATTGTACCCACCAAACTGAAGAAACGCTGAAAATGTTTTCTTTGAGTAGAACATGCAAATCTTCAAGTGCTCAAGTAGATAAGCTACTTCAGTGTGTGCGTCGTGACCTTTTAGTTGAAGGCAATCATTTCCACTATACTCATGCTGCAAATCACCCTGGCGCTTCATGTGGCGCTTGATCCCGAAGGCGATGCCGTGGAGGCCCCAGCGCCCGACGGTGAGGTCCCACGTGCGCCGCGCCGTGCGCGCGGCCACCGCCGCCGCCTCGCAGCACGTTGACGGCGGCCTGTACGGCCACTCCTCCTCCTCCTCGGCGATTCGCGGCGGCGGCGGCGGCGGCGGGGATTTGGGGCGATCGATCGCGAGGCGTTGAAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0242500.1 | 3 | 34896553 | C | T |
| Osa03LNT0242500.1 | 3 | 34897754 | A | G |
| Osa03LNT0242500.1 | 3 | 34898892 | A | G |
| Osa03LNT0242500.1 | 3 | 34899048 | G | C |
| Osa03LNT0242500.1 | 3 | 34899676 | A | C |
| Osa03LNT0242500.1 | 3 | 34899864 | T | C |
| Osa03LNT0242500.1 | 3 | 34899895 | T | C |
| Osa03LNT0242500.1 | 3 | 34900043 | T | G |
| Osa03LNT0242500.1 | 3 | 34900499 | A | G |
| Osa03LNT0242500.1 | 3 | 34897685 | C | G |
| Osa03LNT0242500.1 | 3 | 34897213 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0242500.1 | osa-miR168b | Cleavage | 4.5 | 17.307 | 1 | 21 |
| Osa03LNT0242500.1 | osa-miR1846d-3p | Cleavage | 5.0 | 22.072 | 1 | 20 |
| Osa03LNT0242500.1 | osa-miR2090 | Cleavage | 5.0 | 24.645 | 1 | 22 |
| Osa03LNT0242500.1 | osa-miR2094-3p | Cleavage | 4.0 | 18.796 | 1 | 22 |
| Osa03LNT0242500.1 | osa-miR2905 | Cleavage | 5.0 | 15.514 | 1 | 21 |
| Osa03LNT0242500.1 | osa-miR5486 | Cleavage | 5.0 | 14.788 | 1 | 21 |
| Osa03LNT0242500.1 | osa-miR5518 | Translation | 4.5 | 12.757 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0242500.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0242500.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Osa03LNT0242500.1 | 3 | spp3.1 | Morphological trait | Panicle/flower | RM130 | RG1356 |
| Osa03LNT0242500.1 | 3 | yld3.2 | Morphological trait | Seed | RM130 | RG1356 |
| Osa03LNT0242500.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Osa03LNT0242500.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0242500.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0242500.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1618 | G164 |
| Osa03LNT0242500.1 | 3 | Qbp1 | Resistance or Tolerance | Insect resistance | R1925 | R2443 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)