© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0252700.1
CCTTCACCTTCTCCAGCGAGGCACCGGCGCACCGCCTCCACCTCCCTCTCATCCAATCCTTCTGTTCCTCACACCCCTTCCCCTCCCTCTCGCCGGGCAAGTGCCACTACCCTGTCGTCATCCACCTCACTCTTCTCTCCCTTGACCAGGCCAGCGCAAGCTTGTGACGGCCAGATCCGGTGCCCTTGAGCTCGAGACGGACAGATCCGGCGCCCTTGTGCTCGGTGCCACCGGATCCAGCCCCAATGCGACGTAGTGGAGGCGGCAAGAGGGAGAGGGCCGCCAGATCCAGTCAAGACCCGCTATTTTCTTCTCCAGCCGTCGTGGCGGCGGAAGCATGCTCGATCCCCAGCCCCCCAGGACCTGAGGGTGGGGGTTGGGACGCCGTTGCATGTGACACTCGATGAGGAGTGTCCACGCGCCGTGGACGCATTCGACCACCACGCTTCACGGCTGCTTCATACCATGGAGCTCCTCGGTCGCCACAGGAATCATTTACCTCTTATGGTTGGCTTCAAGCTCTACTTCGCTAGCTAAGCTATTTTCCCAATCCCATGGAAAATAAGGAAGCAGAGTACAGCTAAAGGTCCAAGCAGAGGTTTTAACACCATGGCTGGTAGCAAATAGTGGCATGTTATTTTTGAGTGCTACAGTGATCTTACAATGACGGAAATATACCTGGTTCATGGTTAGTATCAATTCCTTTTCTTTTGCTGAACATTCTTTTTCTTTACTCGGTATCAGACTCTTATCTTATCCCCTGTATCATGTGCACTTGCCTAGCCACCTTCACTTTACTACACTGTTTTTGCTGCTAAAAAAACAACCCTTGTAAAGAATGACTCTATCCATGCTTCAGTATTGCGTATATGATTAAATTGACACCCCTATTATATGCATTTAAATGTGTCATGTACTGCAAACAACATAATAATAAAGCATTTAGTTCAACTACTGACCTACTACTACCACATAGTATCTAATTAGTAATACTATGATCTTGGCATGGTCAATTATCCAACTGTGCTGTACAATTAGTAATGTCCTAGTAGTGTTTTTCATCCTCTTGGCGTAGTTATTTAATCAATGTAGCTAATATGAATTTTGTATCAAACCTAGACAATCATGAAGAGAAAATTGCTTTCGACTTCCATAGATTATATCTTGCTCAACTGCTTTGTGAGAATCTACCTAGTTAATACACATCTTCTATGCAATGTACCTAGTATGACTACTCTCCATGTCAGTACTATGTTTTGGTTATGATTTTGCATAATTGCTGATTGAACATTAGCTGATACCTAAATTTTGTTATTTCACTCGTTGACAAATGCTGATTGAGCAATGCTATTCTAACAGTAAGATACATCTCTTTATACAACCTTTTTAGCTCTTCCCGTATCATGTTCAGAACAGAGGTAGTTAGATTAACATTTATGTATAAAATTTCCCTATCAACCGGCTTTTGTTTTTTGAAAATTTGTGGAGCCCTTGTCAAATGATTATTGTATTGTTGAATATAAGGTTATCTTAGTAAATTCATATACCCGAGGCTATGTCCAATTTCTCCCTTATGCATGAATATTGTTGTGCTAGTCTTTGTAAGAATTAGTTTCACTTCACCTACATTTACTTATATGTACCTGAATCATACATAGTAATGAGTCCATTTCTTTTGCTGAGCCTATTTTTTTCTTTAGTATCAAACACCCTTGTAAAGAATGACCAGGTATTCATGCTTCAGCATTGCATACATGATTAAATTGACACCGTTATTTTAGGCATTTAAATGTGTCATATGTACTGCAGATCAGTAATGATCTTTTGGCCAGATCAATTATCCAATTGAGTTGTATCTGAGTCCTGCTAGTGTTTTTCATCCTCTTGGCATAGTTTTTTAATCATCGTAGCTATACATGAATTTTGTAACAAATCTAGGCAATAATGAAGAAATCATGCACAAGTTCAGATTACCTTATTGTTGTCGATTTGCCGAGATCATTTATTTATCTTGTTCAATGGCTTTGTGAGAACCTACCTAAATAATTCTTACCTCTTCTATGCAATCTCAGGGTATCAAAATTAACCGGCTACTGGTAATCATCCGAGGTGCTGTCAAATGACCTACGACGCCATTTGTCAACATTTTTCTAGTTGCATGGCCTCTTGGTTGCCCAAGGATGTACTCATATGTAGGAAGTATTGTTCAGATTCATCTCAGTTGTAGCTGTTCCCGAGATTGGTATTGCTAGTTTTAGATTACATTGTTG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0252700.1 | 4 | 8764789 | T | C |
| Osa04LNT0252700.1 | 4 | 8764827 | G | C |
| Osa04LNT0252700.1 | 4 | 8765013 | T | C |
| Osa04LNT0252700.1 | 4 | 8767156 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0252700.1 | osa-miR5830 | Cleavage | 4.0 | 13.957 | 1 | 24 |
| Osa04LNT0252700.1 | osa-miR156b-3p | Translation | 5.0 | 12.484 | 1 | 21 |
| Osa04LNT0252700.1 | osa-miR171a | Cleavage | 5.0 | 16.506 | 1 | 21 |
| Osa04LNT0252700.1 | osa-miR171b | Cleavage | 4.0 | 16.506 | 1 | 21 |
| Osa04LNT0252700.1 | osa-miR171c-3p | Cleavage | 4.0 | 16.506 | 1 | 21 |
| Osa04LNT0252700.1 | osa-miR171d-3p | Cleavage | 4.0 | 16.506 | 1 | 21 |
| Osa04LNT0252700.1 | osa-miR171e-3p | Cleavage | 4.0 | 16.506 | 1 | 21 |
| Osa04LNT0252700.1 | osa-miR171f-3p | Cleavage | 4.0 | 16.506 | 1 | 21 |
| Osa04LNT0252700.1 | osa-miR1428a-3p | Translation | 4.5 | 18.103 | 1 | 21 |
| Osa04LNT0252700.1 | osa-miR1854-3p | Translation | 5.0 | 14.813 | 1 | 22 |
| Osa04LNT0252700.1 | osa-miR2122 | Cleavage | 5.0 | 18.657 | 1 | 22 |
| Osa04LNT0252700.1 | osa-miR5491 | Cleavage | 5.0 | 12.817 | 1 | 21 |
| Osa04LNT0252700.1 | osa-miR5519 | Translation | 4.0 | 11.78 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0252700.1 | 4 | qCER4-1 | Morphological trait | Shoot/Seedling | RG190 | RZ69 |
| Osa04LNT0252700.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0252700.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0252700.1 | 4 | nan | Morphological trait | Root | RM261 | RZ69 |
| Osa04LNT0252700.1 | 4 | An8-glum | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0252700.1 | 4 | spp4-2 | Morphological trait | Panicle/flower | RG449 | CDO456 |
| Osa04LNT0252700.1 | 4 | qPEN-4 | Morphological trait | Panicle/flower | RG190 | RG908 |
| Osa04LNT0252700.1 | 4 | nan | Morphological trait | Root | RM261 | RZ69 |
| Osa04LNT0252700.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0252700.1 | 4 | qSNP-4a | Morphological trait | Panicle/flower | RM401 | RM335 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)