© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0254000.1
CTACATTGTATGGATTAACAGCGAAGGCTACATTCATCAAACTACAATCCTTTTAGCACCATCCACTTCTGCCTGCTGCATTTACAATCCTTTTAGGCAATCAATTTTCCTCTTTTGTATTTTGCACAAGGTTACAATAGTTCTCAGGATAACTTGACATCTGGCAAAACTAGTTCTCAGGATACAAGGTGTTCTGAATCTTTACAAACTCCTAATAGTGTATATACTACATAGTAGGAATTACAAAGAAAGGCTACATTCATTATCTTGTCATTGATTGTTCTATGTCACTTCTTCAGCATCCTCTCGTTCATGCTCTTCCAATCTTCAATTGCCATTCATGCCGCACCCCATATATCTCACCTGCAATTCTGCATTGGCCTCAAGTTGCCAGCTGCCAAGTGTGCCAAGAACAAATATCTGATTTTTGCAACTGATTGTGCTGCCATGTAGTGCATATAAAAGAAAAAAGAGAGAAACCAAATGTGGTTCAGTTCAGATTTGGCTCTGTCTTGTAGTGACAGAAAAAGAGAAGCCACCAGGTGGTTCAGTTCAGATTTGTCAGGGGGAAGCCAAAGCCTTATGTTTCTCTAGTTGTTTCAACTATTTTCAGTGGAAGTGTCACAGCTGAATATACAACATGCAACATATCTTACTCCTCCACTATGCAATTTATTCAGTGTGATACTCAAGTTTCAGATTTTTGCCTGTTTTCTGGTGACCTATTCCTAGTCAATTTTGATGTGAGCCTACTACCCCACTTTGCAAAATGTCCAACAATTTTACTGATATGATGATTGGTCGGCCAGGCACCGAGCGAGTTGCCAAGACAGAATGTATGTTTTGTTTATGCAAAACAAAAACCGATTGTCTCAAACTAGTACTAATTAACACTATCAAGCTGCAATGATAGATGCTAGGCTTACTACCTAATCACATGAAAACCAAAACTGAGCAATCAAACCAGAATCTAGTGACCATGATTAACTACCGCAATGAAAACCAAAACCGAGCAATCAAACTATGAAACTCCCAATGCACGGGAGGGTGCCGCCTGGCCCTTCCACCGTCGCTACCCTGCTCCAGGCATGGGAGGGCACCGCCACTGCCCTGCTCTAGGCACGGGAGGGCGCCACCACTGCCCTAGCTGTCCGAGGGAGCCGCCGCCGCATTCCGTCTCCACGCGCCCAACAGCGGATGAGAAAGGGGCGACGGGATAAGAAACAGGCGGAGGGGAACGATGACTGCATCTCGGACTAGATCGAGCCGATCGGAGCGAGCGCGAGCCGAGTTGTGGTGTGTTGAGATCGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0254000.1 | 4 | 10948734 | C | T |
| Osa04LNT0254000.1 | 4 | 10948898 | A | T |
| Osa04LNT0254000.1 | 4 | 10949220 | C | G |
| Osa04LNT0254000.1 | 4 | 10949426 | A | G |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa04LNT0254000.1 | DTM_#DNAt_MULE_japo_Os3282 | Chr4 | . | 10945768 | 10949583 | 1310 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0254000.1 | osa-miR5526 | Cleavage | 4.5 | 18.313 | 1 | 21 |
| Osa04LNT0254000.1 | osa-miR5538 | Translation | 4.0 | 20.269 | 1 | 22 |
| Osa04LNT0254000.1 | osa-miR5789 | Translation | 5.0 | 17.208 | 1 | 21 |
| Osa04LNT0254000.1 | osa-miR5825 | Translation | 5.0 | 15.765 | 1 | 24 |
| Osa04LNT0254000.1 | osa-miR416 | Cleavage | 4.5 | 11.195 | 1 | 20 |
| Osa04LNT0254000.1 | osa-miR1850.2 | Cleavage | 4.5 | 17.005 | 1 | 21 |
| Osa04LNT0254000.1 | osa-miR2932 | Translation | 5.0 | 13.286 | 1 | 19 |
| Osa04LNT0254000.1 | osa-miR5071 | Cleavage | 5.0 | 13.88 | 1 | 21 |
| Osa04LNT0254000.1 | osa-miR5509 | Translation | 4.0 | 19.301 | 1 | 21 |
| Osa04LNT0254000.1 | osa-miR5509 | Translation | 4.5 | 14.314 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0254000.1 | 4 | qPEN-4 | Morphological trait | Panicle/flower | RG190 | RG908 |
| Osa04LNT0254000.1 | 4 | An8-glum | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0254000.1 | 4 | nan | Morphological trait | Root | RM261 | RZ69 |
| Osa04LNT0254000.1 | 4 | nan | Morphological trait | Root | RM261 | RZ69 |
| Osa04LNT0254000.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0254000.1 | 4 | qSNP-4a | Morphological trait | Panicle/flower | RM401 | RM335 |
| Osa04LNT0254000.1 | 4 | qCER4-1 | Morphological trait | Shoot/Seedling | RG190 | RZ69 |
| Osa04LNT0254000.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0254000.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0254000.1 | 4 | spp4-2 | Morphological trait | Panicle/flower | RG449 | CDO456 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)