© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0254500.1
TCCTGGTTCCAACAAGTGTTACACGTATATGTCTGATTAACAGGAATTTATTAAGACGAGGAATTTGTCACTAGACTTCATCTCTTCCATTATCATGTGTTATAAGAGGTATACTCACAGGTATTTGTGCACAGCTTCCATGTAATTAAAAAAAAGGCACTATATAGTGGCAAATTCAGAGTAAGGGCTCGTAACTAGCGCGATTCAATGTCAATCTCCAACCTCACAATTACAGTGCTCATGGTAGTAAGTTTTTGTTATTTACACTGAGATACACCTAAGAGAGGTTTTCCATTATTGTACAACAGTAACAACAGCTGGATGGCTTGCTATCAATTTGAGTTTTCACTGATACGCTAGCATTCTGCAGAGAACAAAAAATATGTCAATAGAGCATGTGCCACCGGCCCACCGGCCCACCGCCCCACATGAAAGTATTGAGTTATGAATCGCTAGCATAACAGCTGGGGCTTTCACTTATGTGCTGGGATTTCTACAGAGATCAACAATGCCAACAGAGCCATGTGAAAACTGTGAGAGTTTTAAACTATAAATTGCTAACAGCAACGTCCACAAATTTCCACCATAAAGCAGGACCGGTTTTATGCCTTCCAGACAGGTTCATTGTTTCGTTGAAGACGCCATGCTGGAGAGCGAAGAATGTTTTGTTTAAGAAGCTAGAGTAGTGGGGAGTGCTTTGGAGGGTTTTCTACCTGTTTATTTTTGGTTGCAAAGTATGTTGTTGCAAGGCACATGATCTGTCTTAGACTGTTTCACCTTTTATTTTATTTTCCTATTTTGACTGGGTACATTTTAGTAGGTGCAGATCGAGTTTACCTCACTTCAAAAATAATATTCTATTCTGTCAAGAGAGATTCTGCTGGTGTCTTCCACGGATGAAAAGCTGATGTTAAAAAAAAAAGGAGTTCCTTTAAACAGGTAAACATGTTCAGATATTCAGGCAACTTTTTGCGAGTTTGCCAATTATGCATGACTTCAAATTTGCCCACCGTGTGTAAGGGTATGTACTATTAGAGAAAAACAAGTACGGTTTTTTAATGATTAAAAACCAATACTTGACAGTCTTGCAATAATGTGGACGGCAGATGAGAAGACCCTGACAGGACTCCTCCTAGCATGTTGCTGGCAAAAAATTGCTCATGTAGACTTGTGCGAGCATTTCACCAAGCTTTACTTGTGATTCAGTGGTAAGATGCAGATGATCTTCATTTAATGACAGTCCAAATGCGTCCACAGTTACAACATTGGGCAGGTTGATACCAAGCTGAGCTTTCCTCACTTTTTCAATGTTCTTTTTATTCCCAGATGCAAGAGCAACCTGGATGAATGGCAGTTGAGGCATCCCAAGATCCTCCCTGACATTGGCGATGAGCGTCTCCAGGTTCCCGGCGTACGCGGCCGTGGCGGCGTCGGACTCGGCGTCGCTCTCCCCCTGGTACCACTGCACGGCCTCGATCTCCCCGCACTCCGCCGCGGCGCGCGCGCGGCGCACCATCTGGTCGTAGAGGCGCTCCCCGCGGGCCCACTCCCGGATGGCGGTGCCGCCGACGGCGCAGGGGACGAGGCCGACGCCGGAGCCGGGCGGGTCCAGGCGCGGGAGGACGGCGCGGGCGAAGGCCATCCCGGGGCCGACGCCGCAGGTCTTGGCCGTGTCGATGTCGGCGTGGAGCGGCTCCCGCGCCTCCACCCAGTCGAGCGCGGCGGTGAGGCGGAGGACGGAGGGGCACGGCGCGCACTCCGGCGGCACGACGCCGTCCCAGCGCCGGTGGTGGACGCCGCCGCGGCCGGCCATGTTGCTCTGGCCGGAGAGCACGAAGATGCGCATGGCGGCGGGGCGTGAGGCGTTTGGGTGTGAGCTGCAGCCTGCAGTGGGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0254500.1 | 4 | 11681871 | T | G |
| Osa04LNT0254500.1 | 4 | 11681986 | A | G |
| Osa04LNT0254500.1 | 4 | 11682116 | C | T |
| Osa04LNT0254500.1 | 4 | 11682215 | G | C |
| Osa04LNT0254500.1 | 4 | 11682236 | A | G |
| Osa04LNT0254500.1 | 4 | 11682496 | A | G |
| Osa04LNT0254500.1 | 4 | 11683568 | G | A |
| Osa04LNT0254500.1 | 4 | 11683641 | A | G |
| Osa04LNT0254500.1 | 4 | 11683701 | G | C |
| Osa04LNT0254500.1 | 4 | 11684262 | A | T |
| Osa04LNT0254500.1 | 4 | 11684309 | G | C |
| Osa04LNT0254500.1 | 4 | 11681412 | C | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0254500.1 | osa-miR812q | Cleavage | 5.0 | 12.598 | 1 | 24 |
| Osa04LNT0254500.1 | osa-miR167e-5p | Cleavage | 5.0 | 14.604 | 1 | 21 |
| Osa04LNT0254500.1 | osa-miR167g | Cleavage | 5.0 | 14.604 | 1 | 21 |
| Osa04LNT0254500.1 | osa-miR171i-5p | Translation | 4.5 | 20.087 | 1 | 21 |
| Osa04LNT0254500.1 | osa-miR167j | Cleavage | 5.0 | 14.604 | 1 | 21 |
| Osa04LNT0254500.1 | osa-miR1429-3p | Cleavage | 5.0 | 17.913 | 1 | 21 |
| Osa04LNT0254500.1 | osa-miR1435 | Translation | 4.0 | 21.189 | 1 | 20 |
| Osa04LNT0254500.1 | osa-miR1871 | Translation | 5.0 | 15.928 | 1 | 24 |
| Osa04LNT0254500.1 | osa-miR2101-5p | Translation | 3.0 | 16.243 | 1 | 22 |
| Osa04LNT0254500.1 | osa-miR5339 | Cleavage | 4.5 | 18.676 | 1 | 21 |
| Osa04LNT0254500.1 | osa-miR2275d | Cleavage | 3.0 | 18.341 | 1 | 22 |
| Osa04LNT0254500.1 | osa-miR167a-5p | Cleavage | 5.0 | 14.604 | 1 | 21 |
| Osa04LNT0254500.1 | osa-miR167b | Cleavage | 5.0 | 14.604 | 1 | 21 |
| Osa04LNT0254500.1 | osa-miR167c-5p | Cleavage | 5.0 | 14.604 | 1 | 21 |
| Osa04LNT0254500.1 | osa-miR167d-5p | Cleavage | 5.0 | 14.604 | 1 | 21 |
| Osa04LNT0254500.1 | osa-miR167f | Cleavage | 5.0 | 14.604 | 1 | 21 |
| Osa04LNT0254500.1 | osa-miR167h-5p | Cleavage | 5.0 | 14.604 | 1 | 21 |
| Osa04LNT0254500.1 | osa-miR167i-5p | Cleavage | 5.0 | 14.604 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0254500.1 | 4 | qPEN-4 | Morphological trait | Panicle/flower | RG190 | RG908 |
| Osa04LNT0254500.1 | 4 | An8-glum | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0254500.1 | 4 | nan | Morphological trait | Root | RZ69 | RG449 |
| Osa04LNT0254500.1 | 4 | nan | Morphological trait | Root | RZ69 | RG449 |
| Osa04LNT0254500.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0254500.1 | 4 | qSNP-4a | Morphological trait | Panicle/flower | RM401 | RM335 |
| Osa04LNT0254500.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0254500.1 | 4 | gwt4a | Morphological trait | Seed | RG788 | RG190 |
| Osa04LNT0254500.1 | 4 | spp4-2 | Morphological trait | Panicle/flower | RG449 | CDO456 |
| Osa04LNT0254500.1 | 4 | nan | Morphological trait | Panicle/flower | RG788 | RZ69 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)