© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0262800.1
ATGTAAGTCATTTTAGCATTTCCCACATTTATATTGATGTTAATGAATCTAGACATATATATTTATCTAGATTCATTAATCTCGATATGAATGTGGGAAATGCTAGAATGACTTGCATTGTGAAACGGAGGAAGTACTTGTGTTCCACATCAGGGACAGGAAGAATTTCAAGAATTTTTTCTCTATTGTAACATATATCTGTTTTTTGTTGCTTAGTCAAGCAAATGCCCCTTTCTGCATTGAAGCTTCAAAAATGCCAATCACCAAGCTTTGCAAGCCAAAATGGCTACGGAGTGTGGGGCAAGAGAGAACAGTTTGGATGCCATAATTTCATGCTTGTTGGGCCTTTTCTTCTTCTAACAGTAAATGAATAATGGATCTGACCACTTCATTGTCAACAAAAGTTGCCATCTCTGGCTTTCTTATCAATTCTTTCAGAACAGCATCAAGTGTTACGCGAAGTTGCTTGAATAGGACAGCAGTCTGTGCAGCAGCTGCCAGCCTTAACCATCCATCTATGATAACCACTCCTGTCTGATGTTGGATAACCATGGTACCACCAAACAGAAGGAGCGAGTAAGGAGAAATAACACTAGTATCACGTAGAAATACCTTACTTGTCTCAACCTTCTCAAGAAACACCAAAAATGGATATTGACCAGCTTTCAAGCTGTGGTTCATAGATGATGGGTGTATGTGAACTTCTCGTCGTCCATCATACCATCGAGGACGGTCCTTTCCAGACAGAAAATCAGATGGCTTCCTGCCACCTAGAGCTCCTGGATCAACACCCTCTAAAGTAGCTGCAACATTAGGGTATAGACCTGCGCATATGACTGACTTGACAACTGAGGAGTAACGAGCATATAAGTTAAATGGAAGAGACATATTCGCAAACCAACTCTCAAGAGTATTTTTCCTCGTTCCATCCACAGGCCTCAGGCTATCTTTAGGAATATCCAAAAGTCCAATGTCTGCTAATAATGTCCCATACTGTAGTCGCATGTCTCTGACCATATACATCACTGTACTGTTCAAGTAGAATGAACGGCAAAACTGATGGGCAGATCTAGCTCCATTCTCTCTTAGTATGCGAGACCACTTATTGTATGCAATAACCATTAACAGGTGGTCAGATTGTTTATTATCTGCTGTAGAAGCAGATCCATCAAGGTTTTCATTCATCAATGAAGCCTTTGCCTTCTCCACATTTTGCTTCTCATCTTTTGGAGAGATGAATGGGGATTTATAACTCAGAAAAGCAGCAACAGAAAGAATGGGAGATAAGCAGCCAAAGATAGCACCATAGAGCATCATCTTTCCAATCAAAACATCAACTGGCAATTTGGCCAAATGATAGCCAAGAGGTGATAATTCCTCATGTCCTTCAAATGCTCCAACCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0262800.1 | 4 | 21428581 | C | T |
| Osa04LNT0262800.1 | 4 | 21428642 | A | T |
| Osa04LNT0262800.1 | 4 | 21432881 | T | C |
| Osa04LNT0262800.1 | 4 | 21432381 | T | C |
| Osa04LNT0262800.1 | 4 | 21428518 | T | C |
| Osa04LNT0262800.1 | 4 | 21428523 | T | C |
| Osa04LNT0262800.1 | 4 | 21428527 | T | C |
| Osa04LNT0262800.1 | 4 | 21429396 | A | G |
| Osa04LNT0262800.1 | 4 | 21429614 | A | C |
| Osa04LNT0262800.1 | 4 | 21429878 | G | A |
| Osa04LNT0262800.1 | 4 | 21429917 | A | G |
| Osa04LNT0262800.1 | 4 | 21430138 | G | A |
| Osa04LNT0262800.1 | 4 | 21430435 | G | A |
| Osa04LNT0262800.1 | 4 | 21430600 | A | T |
| Osa04LNT0262800.1 | 4 | 21430711 | T | C |
| Osa04LNT0262800.1 | 4 | 21430725 | A | G |
| Osa04LNT0262800.1 | 4 | 21430789 | A | G |
| Osa04LNT0262800.1 | 4 | 21430934 | A | G |
| Osa04LNT0262800.1 | 4 | 21431089 | C | T |
| Osa04LNT0262800.1 | 4 | 21431145 | G | T |
| Osa04LNT0262800.1 | 4 | 21431545 | A | C |
| Osa04LNT0262800.1 | 4 | 21431572 | G | A |
| Osa04LNT0262800.1 | 4 | 21434271 | G | A |
| Osa04LNT0262800.1 | 4 | 21434593 | C | T |
| Osa04LNT0262800.1 | 4 | 21434880 | T | C |
| Osa04LNT0262800.1 | 4 | 21434931 | T | G |
| Osa04LNT0262800.1 | 4 | 21435017 | A | G |
| Osa04LNT0262800.1 | 4 | 21435195 | T | C |
| Osa04LNT0262800.1 | 4 | 21428933 | G | A |
| Osa04LNT0262800.1 | 4 | 21433790 | A | G |
| Osa04LNT0262800.1 | 4 | 21434173 | A | G |
| Osa04LNT0262800.1 | 4 | 21435386 | T | C |
| Osa04LNT0262800.1 | 4 | 21435387 | A | G |
| Osa04LNT0262800.1 | 4 | 21435524 | T | C |
| Osa04LNT0262800.1 | 4 | 21435640 | T | C |
| Osa04LNT0262800.1 | 4 | 21431396 | T | C |
| Osa04LNT0262800.1 | 4 | 21431582 | G | A |
| Osa04LNT0262800.1 | 4 | 21432685 | A | G |
| Osa04LNT0262800.1 | 4 | 21432734 | T | C |
| Osa04LNT0262800.1 | 4 | 21432945 | A | G |
| Osa04LNT0262800.1 | 4 | 21433029 | T | C |
| Osa04LNT0262800.1 | 4 | 21433086 | A | G |
| Osa04LNT0262800.1 | 4 | 21433345 | T | C |
| Osa04LNT0262800.1 | 4 | 21433392 | T | C |
| Osa04LNT0262800.1 | 4 | 21433113 | A | G |
| Osa04LNT0262800.1 | 4 | 21432152 | T | C |
| Osa04LNT0262800.1 | 4 | 21432153 | A | G |
| Osa04LNT0262800.1 | 4 | 21432193 | T | C |
| Osa04LNT0262800.1 | 4 | 21432232 | T | C |
| Osa04LNT0262800.1 | 4 | 21432256 | A | G |
| Osa04LNT0262800.1 | 4 | 21432267 | A | G |
| Osa04LNT0262800.1 | 4 | 21432286 | A | G |
| Osa04LNT0262800.1 | 4 | 21432660 | C | A |
| Osa04LNT0262800.1 | 4 | 21432682 | A | G |
| Osa04LNT0262800.1 | 4 | 21433414 | C | T |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa04LNT0262800.1 | DTM_#DNAt_MULE_japo_Os0105 | Chr4 | - | 21432125 | 21433490 | 1365 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0262800.1 | osa-miR166a-5p | Cleavage | 4.5 | 21.683 | 1 | 21 |
| Osa04LNT0262800.1 | osa-miR166e-5p | Cleavage | 4.5 | 21.683 | 1 | 21 |
| Osa04LNT0262800.1 | osa-miR395u | Cleavage | 5.0 | 13.537 | 1 | 21 |
| Osa04LNT0262800.1 | osa-miR166l-5p | Cleavage | 3.5 | 21.683 | 1 | 21 |
| Osa04LNT0262800.1 | osa-miR444a-5p | Cleavage | 4.0 | 12.769 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0262800.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0262800.1 | 4 | orl1 | Morphological trait | Culm/leaf | S10628 | C377 |
| Osa04LNT0262800.1 | 4 | qFRP-4 | Physiological trait | Source activity | RG788 | RZ565 |
| Osa04LNT0262800.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)