© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0264500.1
TTGACAAATATAAATTTGAACATGCCTTGGTTAACAAATTCAAATAACACAACTTACACAACTTAGTTGACAAATTCAAATTTGAACATGCCTTAGTTGAATTCACAGTTCTAGATTCACATATCACCTTTACAAAAATTCACAGATCACAGATCAAAGATTCACAGATCACATTGACAAAAATTCATAGATCACTTGACTAAGATCACATATCACATGGACAATTCACAGAAGAGTTTCAAAAATCACAGACTCACAGTTGTAGATTCAAAAATTTCACCAAGTCAAATTACCCAAAATCACAAATTTTCACCCAAACTTTCACCCAAAAAACTTGACTTAGATCACAGATGACATGGACAATTCACAGAAGAGTTTCAAAAATCACAGACTCACAGTTGTAGATTCAAAAATTTCACCAAGTCAAATTACCCAAAATCACAAATTTTCACCCAAACTTTCACCCAAAAAACTTGACTTAGATCACAGATGACATGGACAATTCACAGAAATCACAGTTCTAAGATTCAAAAGTTTCACTAAGTCAAAAATTACCCAAAATCATAAACTTTCACCCAAAAACTTGACACGAGTATTTCAATGAATAAAGTAGCTGTGTAGTGCAATGGCTGCCTCGTTAAAAACCTTTCTAGGTAAAAACTCACACCTCGTGAGAAAACCCTAGAAAGGAAAAAAGAGTGCAGCCCACAGCATTAATCAAATATTCATAATAAAGTCCAAGTCCAATACAATCATCCAGTCCCAATGGCAGTGGTTACTTCATCAAGAAACAAATTGTCAAAAGAGTTTATAAGCTCTAAATTCTCCATGGTATGTTGCATCTTTGCATCTGCTTGCTCCCAATCTTTGATTAGTGCCAAAGCTTGCACCATGTCAGGAGCTAGACGCCGTCGTCGCTCCTCGATGATCCTGCCAGTTAAGCGTAGCGGCTCACTCCGTCGGTTCGGCCCTGCTCCACGAACACGCCGGCGAGACGTCGGCGGCGGCGAGCTTGCTCTTCTCTAACTGCAGCTCGCCTGCTGATCACTCGAGCAGTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0264500.1 | 4 | 22645883 | T | C |
| Osa04LNT0264500.1 | 4 | 22645884 | A | G |
| Osa04LNT0264500.1 | 4 | 22645902 | T | C |
| Osa04LNT0264500.1 | 4 | 22646339 | G | A |
| Osa04LNT0264500.1 | 4 | 22646592 | T | C |
| Osa04LNT0264500.1 | 4 | 22646846 | A | T |
| Osa04LNT0264500.1 | 4 | 22647908 | G | C |
| Osa04LNT0264500.1 | 4 | 22644564 | C | G |
| Osa04LNT0264500.1 | 4 | 22644565 | A | G |
| Osa04LNT0264500.1 | 4 | 22644824 | T | C |
| Osa04LNT0264500.1 | 4 | 22644853 | G | A |
| Osa04LNT0264500.1 | 4 | 22645162 | T | G |
| Osa04LNT0264500.1 | 4 | 22645786 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0264500.1 | osa-miR5805 | Cleavage | 4.0 | 24.609 | 1 | 24 |
| Osa04LNT0264500.1 | osa-miR408-5p | Translation | 5.0 | 15.76 | 1 | 21 |
| Osa04LNT0264500.1 | osa-miR1872 | Cleavage | 4.0 | 9.781 | 1 | 24 |
| Osa04LNT0264500.1 | osa-miR1872 | Cleavage | 4.0 | 9.82 | 1 | 24 |
| Osa04LNT0264500.1 | osa-miR2873a | Translation | 5.0 | 11.503 | 1 | 24 |
| Osa04LNT0264500.1 | osa-miR2873a | Translation | 5.0 | 8.893 | 1 | 23 |
| Osa04LNT0264500.1 | osa-miR2873a | Translation | 4.0 | 5.757 | 1 | 24 |
| Osa04LNT0264500.1 | osa-miR2873a | Translation | 4.0 | 5.253 | 1 | 24 |
| Osa04LNT0264500.1 | osa-miR2918 | Cleavage | 5.0 | 13.803 | 1 | 21 |
| Osa04LNT0264500.1 | osa-miR2918 | Cleavage | 5.0 | 13.731 | 1 | 21 |
| Osa04LNT0264500.1 | osa-miR2873b | Translation | 4.0 | 2.837 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0264500.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0264500.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0264500.1 | 4 | nan | Morphological trait | Culm/leaf | RM3337 | RM3785 |
| Osa04LNT0264500.1 | 4 | orl1 | Morphological trait | Culm/leaf | S10628 | C377 |
| Osa04LNT0264500.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)