© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0268800.1
AAAATAAATACCGTTTCTTGTTTTCCTTCACAATACTGAAGTTTTAATCCTAAAAAGTATGATAATTTACAGAGAAATTTGAGCACTCGATACAAAACTCACTTTATGAGCTTCTCTCATCCTAGGTGGCTTGTTGCCATGTGGTAAAGAAAAATCCTGCCTAGCTTCAAAATAGAATTGCTCCACCTCCTACTTCCCTGATTTGCTCATGTAGTGAAGCAAATGACATGCGATTTAACGGGAAAAAAACACTAATATTTTAACACTGCTTGTGACATAGCTAGAATGAGTATCTCTGAACAAATATATTTTTTAAGGAAATTCGAGTTCAATAATTAGGTATAGCTATCAGTCAAAGAGCATCCTCAGTAGCTCAAGCAGTAACTACTTAATTTACTGATTCAGTTTGAAGGAGCCGAACAATCTACTACAGACTCTGGTGCATTAGGGCCTGTTTGGCGTAGAGCTGGAGCTCAGCCAAACAGTTTCAGCTCCACTAAAACTGGGAGTGGAGTTGGGTGGAGCTCTCTCACAAAATGAACTGGAGTTGTGGAGCTGGNNNNAGGCNGNTNCACAACTCCACTCCAGACCCAACTTCTGGGTTAAATTTAGGAGTTGGAGCTATAACAAACAGGCCCTTAATCACGAAAAAATGTGGATCAGCAACAATTATCGAAGCAAGAATTACTGAATCATGAGTACTAAATAAAAATGATAAGCACCAAACCTAGATCGGCATGAGTACCAAATGGAAATTGATAATCATAAGTACTATCGCGACATTGAAGGTGAAATACAGTTCCATGACCAAAATGAACTATTCTAGTCTAATGATGTCTCGCCAGAGCTCATTCTGTCAACTATTGCCAAACAAATAATGTGCATATAAAGTCACACAAATACCAGGTTATTGTGTATGCTAGACTAATGAGAAGTAATTTAAATGAGAGGCACCTTAGCACTTAGCAGCTAGACATTTATTTCTCCATATATATTTCTACAATCATATATTGACATATACCACTTGTATAGGAAGCAGAAAAGACTAACAAATTTGTACCTGCGTTCACATGATACAATCATTCTCTGTGATACCAAGAACTACACTGATAACAAATTTGGTTCTTACATCATTTGGCTTTTTCTAATTGTAGAAGCCATTAACTCAGAAGGTTCAACCTCCATTTTTCTATTCTTCATCGCATTAGCAATCTTAAAAATCATGAAATATGCATGTACACCCGTTGGTTACTTTCAAATACCAGGATTCAAAGTCATGGCAGGATTTACATCCATATCTATACTACAAATGCATCAAGATACATGGTGTAAAGGTCATAGAAATAAGTGATTGTCCTGCCAAAAAAGGTGTATTTGGTTGAGATTGGCTTTGTTAGAAATGAAAAGACAAATAAGATAGGCAAGATGATCTTAATTTTAGCTGCTAGAATTAAGGCCATGTAATAACAAATAGGAGAATTTCAAAAAATTAAATGATTTTCCTATTCAATCTAATAGTGTTTTGACTTTGTGATTCCTTCATATGGAAGGGCAGCCAATTTGTAACAAAGGCGGAAACTGGGACTATCAGATCGTAAAAAATTTCTAAACAAATGCATAATCTCGGAAGTGAAGCCTAACCTATTTTCCTTAACAGCTGAACACATTTAGAACAAAGTCAGAAGCTGAGACACCTGAACAGGACAATTTGTTAAGCTATTTCTAAAATCTAGATCTCATGTTAGTCCATCTAAATGTTGTGCCTATTTACATTCTGAGCTTTAAACTTATTATACATATTTTGAAATATATACCATATGCTGAATCTGAATAACACAATTTGCTTTCTATAGGTATTCATAAAAAAAATGCAGCAATCCTGTATAACGTATTAACGTATACCCAAACAAGATGATCTTGGTTATATCTACTGGAAATTATGCTTGGAATTGATTCAGTAAAATGAACTTGGCCAACAAGCAGAAAAACAACAGCCGTGCAGCAGTCTTAGATCTATGTACACCGAATACCTTGTTTTATCTCAAAGGGAATATCCGCGACAGACGTTAATATGTTCATGGCAAATCACAATCGAAAATAATTAAGTGATGACATATGCATTTCAGCATATGGCATCACTTTATTATTATGCATTTCACACTAAAAATTATCAAAAATCCAGTGTTAATTAAGTGATGCCAACAACAAAGAAGATTGAAATAAAAGTGCTTGTGATAGCACCTCGCAACATAATAATCACGTAGAGTGGATAGCAAGCACAAAAACAAAATAGTGCAGAGGAGCACAAAAAGGAGCAAGAAATAGTGCAGAAGAGGATAACTGGCATTACCTTAAATGCAGAGGATGTTGAGCAGTAGTGACCTGGAGCAGATATGCTACAAGAAAATGTAAGCTGTTAAAACAATAATATTCAGTTAGAAACCAAACTATTTGTTTCCATTGAAGATTGTTTAACAGAGTAAAAAAAAATCCATGTGAGAGACTACACTAAACCGACCACTGCAGCCGGCAGCTGTATACCGAGCCAACCAAATGAAATCAAATCAGAACCTTGGAGCTGCATTAGTTTGACTACAAATAAGCGTGAGACCCTGGGGTGCAGCGGCGATTGAACCTGAGATCTACTTCTCTCTTTTTTTCTGCAATGTGCCCCTGTGCCGGCATGAAGTATGAACACATGTGCCGTCGTTCACCTATACAGCTCCAGCAATCATGTGCCATCGTTTTTATTGATGGAAGAGTAGAAAAAAAATCTAATACCATGGGAGATTGATTTATTGCAAGGAGCAGGGTAATCTGTGACCAGCTGAATTTCCAGCCACTATAGGAGCATCTCCAAACCTCCAATTCTGATATTTTGGCTATGATTATAGGTCTCGAGCAAGCAAACTGATGTTGCAATGATTTTAGAAAATGATCAGAGAGCCATGATCTGACTCTATCCCTCCCAAGGTTGCGCTCTGCTAGCATATGGGAATTTGCCTGCGCAATCTGCCAGTTAGCGAGCCGCAGCTTCTGGCCCATTTCCGCTCAACTCTATGATTTTGTCCCTCTCCTCAAGGAGCCCCAGAGGTTCCGAGTTCTCCAGCTGCACAATTCCCTCCTTGCCCGCATCCGCTGCACACACCGGTCCGTCATGGTCCATGGGTGTACCTCCTCATTACAGCCCCGCCCTTGGATATCGAGCTCACGCCATTCGCGGCCATCCTCCCCGGTGCAGCAGCGGCGGCCGCCTCCGCCTCCACCGCTGGCAGTGCCAGGATGGCGATCTGGTGGGGGAGCAAAGACGACAGCCTCCATGGTGGCTCGTCTCAATGGAGGAGGTGCAGTGGCATCCATAACGCGAGGCGGAGATCGGGGATCCGCAGTGCCGGGGCGGGGTAGGGTTTGGGGATTTGGAGTGGCGGCACGACGGCAGCGGCGGGGTAGGATTTAGGGATTGGGTGTGGCGGCGATTGGCGAGTGGCAAGAATCGCGGA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0268800.1 | 4 | 24334273 | T | G |
| Osa04LNT0268800.1 | 4 | 24331331 | A | G |
| Osa04LNT0268800.1 | 4 | 24331486 | T | C |
| Osa04LNT0268800.1 | 4 | 24332106 | T | G |
| Osa04LNT0268800.1 | 4 | 24332753 | C | T |
| Osa04LNT0268800.1 | 4 | 24333899 | A | G |
| Osa04LNT0268800.1 | 4 | 24334167 | T | C |
| Osa04LNT0268800.1 | 4 | 24334492 | C | T |
| Osa04LNT0268800.1 | 4 | 24334526 | G | A |
| Osa04LNT0268800.1 | 4 | 24334553 | C | T |
| Osa04LNT0268800.1 | 4 | 24332147 | T | C |
| Osa04LNT0268800.1 | 4 | 24334625 | A | G |
| Osa04LNT0268800.1 | 4 | 24332434 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0268800.1 | osa-miR5791 | Translation | 5.0 | 20.144 | 1 | 21 |
| Osa04LNT0268800.1 | osa-miR531c | Translation | 5.0 | 15.571 | 1 | 24 |
| Osa04LNT0268800.1 | osa-miR418 | Cleavage | 3.5 | 8.407 | 1 | 21 |
| Osa04LNT0268800.1 | osa-miR531a | Translation | 5.0 | 15.571 | 1 | 24 |
| Osa04LNT0268800.1 | osa-miR1428e-5p | Cleavage | 4.5 | 21.244 | 1 | 22 |
| Osa04LNT0268800.1 | osa-miR1428e-3p | Cleavage | 5.0 | 14.271 | 1 | 21 |
| Osa04LNT0268800.1 | osa-miR1862a | Cleavage | 4.5 | 12.275 | 1 | 24 |
| Osa04LNT0268800.1 | osa-miR1862b | Cleavage | 4.5 | 12.275 | 1 | 24 |
| Osa04LNT0268800.1 | osa-miR1862c | Cleavage | 4.5 | 12.275 | 1 | 24 |
| Osa04LNT0268800.1 | osa-miR1862d | Translation | 3.5 | 12.275 | 1 | 24 |
| Osa04LNT0268800.1 | osa-miR1862e | Cleavage | 3.0 | 13.493 | 1 | 24 |
| Osa04LNT0268800.1 | osa-miR1428f-5p | Cleavage | 4.5 | 21.244 | 1 | 22 |
| Osa04LNT0268800.1 | osa-miR1428g-5p | Cleavage | 4.5 | 21.244 | 1 | 22 |
| Osa04LNT0268800.1 | osa-miR2099-3p | Translation | 5.0 | 20.754 | 1 | 20 |
| Osa04LNT0268800.1 | osa-miR1862f | Cleavage | 5.0 | 12.275 | 1 | 20 |
| Osa04LNT0268800.1 | osa-miR1862g | Cleavage | 5.0 | 12.275 | 1 | 20 |
| Osa04LNT0268800.1 | osa-miR5081 | Translation | 4.5 | 14.002 | 1 | 22 |
| Osa04LNT0268800.1 | osa-miR5487 | Translation | 4.5 | 19.827 | 1 | 21 |
| Osa04LNT0268800.1 | osa-miR5517 | Cleavage | 5.0 | 15.012 | 1 | 21 |
| Osa04LNT0268800.1 | osa-miR171f-5p | Translation | 4.0 | 7.275 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0268800.1 | 4 | nan | Morphological trait | Culm/leaf | RM3337 | RM3785 |
| Osa04LNT0268800.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0268800.1 | 4 | orl1 | Morphological trait | Culm/leaf | S10628 | C377 |
| Osa04LNT0268800.1 | 4 | qChla4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0268800.1 | 4 | qChlab4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0268800.1 | 4 | qPH1-4-1 | Morphological trait | Dwarf | RM241 | C2807 |
| Osa04LNT0268800.1 | 4 | qCCFJ-4 | Physiological trait | Source activity | RM261 | RM3785 |
| Osa04LNT0268800.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)