© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0270500.1
GACCGCTACAATGACACGATATATTGTAAACCAACAGAATACTCCAAAACCATAGTACATTGTTACAAAATGTGTACGCACAGAAAAGAACTAATAAAGGGACACAAAAATACCACATTAAGCCTTGTTCATCTCAGGCTCCAGCGAATTAAGCTGTCACCCGATAGCAAAATCCATGGCTTCTTTCTTTCCTTCGTTGTCGAAACAATAATGAACACTCATCTGACCTTGCAAAAATATACAGCACAAAACTGGCTGTTGCTCACATCTCCAGTACGAGAGTTCCTCTGGGGTGAAACACCTAAGCTATAGAGAATACACGATGCTGTTTTGGCTAGGCACAGCATCCAAAAGGTTGATATGCCAAGGCTGCCAAGGGGCTATTATTTCAAAAGTTTGTTGCAGGCGTCGATTACCACAGCATGCGAGCTCAATATAGCCTGACCTGAAGAGTTTCCGCCCATGGTTTTCATGACAGCATCAAAAATTCCTTTGCGGAAGTATGTATCCTCCACTGCTTTTAGAATCTCCTCAACAACTTCAAAGCTCAAGCCACACGACAAACTCAGTCGTGCAACAACTTCACCAAACAAGGCTGGAGCTAGAGGAAGGTCAATACCAATATCTTCCAGCAGGGCTGCATACAGTAAGCATCCAGTTTTCAGGTCCTCAGTCTTGAAAATTTTCTTGGCGTGCAGATGCTCCAGCAGCCTAACAAGAGGATCAATGAAGTTGGGACCCTTATCCAAAGCAAGATTGATAGCTTCTTTCACAATCTCAGAGTAGTACTCAGGACACTGAAGCTCCTCGATACATTGTTGTGCTTCATCCAGAATACGTATGCCAAAATACTCTTCAAGAAGGGATACCGTCTTCTTCTGAACTGCAGCTGGCATCTCATGGGAAGAACCGGCTGCTTTGTCTGTGACAGGCACAACAGCTGGAGCTGCACTTACAGGTTTTGGTGATGGTGCAGTTTGAGCTGGTGTATGAGTGAGACTAGCCATAAGGCTGGAAGGGCGAGATGGTGGACCACCACTGCCCAAAAGAGCACTCTTACCAATTAGTGCTCCACTTCCATGAGGAAGAAGCCTGGAGTTAATAGATGATGGCTTGTTAATAGATGATGGCTTATTAAGCAACGGACCCTGGTTACGAAGAGAGTCGCCTCTTGGCATTGATTTAGAACGTGGAACTTCCCAGTTATCATTATCTAACCCAGGCATTCCAGGCATCTTTCTTGATCCAGGCATACCAGGTGTTCCAGGCATCCCAGGCATCATCCCTCCTGTTCCTGGTCGATTCATTGGGAATCCACCAGGGGAAAGAGGACCACCTGGTGCATTACGGCCATTCCTCGTGAGTCCTGTTGCCCCTGGCCGTAGTCCAAGTGTCTTCATAGCCTCATCATGAATTTCACTGATTGTCTTGGCCTTAATCTCTTCACGTCGAGGCACCCAATTGTTTGAACGAAGATCAACCACATCACGAACCATAAACCTCAGACGTGGTGCCAACTGAAGGTTTGTTGTTAACTCCTTCATCTGAATGAAGTAGGTATCATTAATTCGACGAGATTTTGGGTTCTCGTCAAGCTGTTTACCAATTGTATTGAAGAACTGACAAATAGCCTCAACGTTTTCCTCTTCAGGGCAAGCCTTTTTATCAGGTCCAGACCCCAAGAGTTCCTGAACAATGTGATGAACTATCTTTTCAGGTACCATCTTTTGCTTAAGTAGCTCACCAATTAGACGGATATTTCCAAGTGTTCTTAGTTTGACAATCCTTTCTTTGTCCCTTCTCTCCATCTCTTGGTCAGGGCCAGTCAATTTTGCTATTTCAGCCCTTAGGCTCTCAGCACCTTCAAATGCTTCCTGACAATTGTTCAACAGCACACGCTTGAATGTAATCTCTTTGCCACCTGGTTCTTCCGAAGGGAATGATGGTAGCTTCTCATTGAGATCGGAACAAAGTTGAGCATACATCGGACAGAAGGTGGGCTCAAAAACAGCCTTCTCAAATATGAGAGAAATAACATCCTTTAGAATATCAGCAGTGGTAATTCCAGATTCCATTAGTTGGCCCTTGAGTAGATCAAATTTCTCCGGTGTCAGTTTGTTTAGTATACTGCATACGCACAAGAAAAACAGGCAGCAAGTCAATGCCAGAAAACTGTGTTATAAAGAAATAAAGAAATAAAGAAATAAAAGCACTCAAAAAGGAACAAAAACATGAAAAAGACTGAACGATAATTATGATACCCTTTCACTGTTTTCAGGACTCTATCTTTCTCTGAGAGATTGCCTCTTCTAGCTGACCAAGGTACCTCAGCCTTGATAAGAGCAGGAGTCGGGCCAACCTGAGCTTTTGAAGCAAACTGGTGGTTTAATTGATCCTGCCTGTTAACTTGCTCTTGTTGCCGACCACTTGAAGCATGTGCTGCTTTAGCTTCACGAATGTTGTCCCAGGACTTCTCTTCATTAGCTGCCGGAGGTTGAACCGTGCGTGCACGCCAGTCACGGTTATCTGTCTCACCATACCGATTGTGCGGTTGCGCCTGGGTTTGTGTCTGCACTTGCACCTGAACAACAAAAGACTACAATTTGAGACAGAATTGTATGCTTCAACCAGACCAATTGGTAGGATTGATT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0270500.1 | 4 | 24947747 | G | A |
| Osa04LNT0270500.1 | 4 | 24949703 | A | G |
| Osa04LNT0270500.1 | 4 | 24949808 | A | G |
| Osa04LNT0270500.1 | 4 | 24947511 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0270500.1 | osa-miR5792 | Translation | 4.0 | 21.42 | 1 | 24 |
| Osa04LNT0270500.1 | osa-miR5831 | Translation | 4.0 | 13.388 | 1 | 24 |
| Osa04LNT0270500.1 | osa-miR396c-3p | Cleavage | 5.0 | 12.394 | 1 | 21 |
| Osa04LNT0270500.1 | osa-miR396c-3p | Cleavage | 5.0 | 17.665 | 1 | 21 |
| Osa04LNT0270500.1 | osa-miR397b | Cleavage | 5.0 | 18.61 | 1 | 21 |
| Osa04LNT0270500.1 | osa-miR166k-5p | Translation | 3.0 | 15.779 | 1 | 21 |
| Osa04LNT0270500.1 | osa-miR530-3p | Translation | 3.5 | 16.957 | 1 | 21 |
| Osa04LNT0270500.1 | osa-miR535-5p | Translation | 4.5 | 11.302 | 1 | 21 |
| Osa04LNT0270500.1 | osa-miR2870 | Translation | 4.0 | 22.097 | 1 | 21 |
| Osa04LNT0270500.1 | osa-miR812n-5p | Translation | 5.0 | 18.618 | 1 | 24 |
| Osa04LNT0270500.1 | osa-miR5155 | Translation | 4.0 | 17.865 | 1 | 24 |
| Osa04LNT0270500.1 | osa-miR5159 | Cleavage | 4.5 | 17.695 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0270500.1 | 4 | qChla4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0270500.1 | 4 | qChlab4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0270500.1 | 4 | qPH1-4-1 | Morphological trait | Dwarf | RM241 | C2807 |
| Osa04LNT0270500.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0270500.1 | 4 | nan | Morphological trait | Culm/leaf | RM3785 | RM1388 |
| Osa04LNT0270500.1 | 4 | nan | Morphological trait | Culm/leaf | RM3785 | RM1388 |
| Osa04LNT0270500.1 | 4 | nan | Morphological trait | Culm/leaf | RM3785 | RM1388 |
| Osa04LNT0270500.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)