© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0272200.1
TGGAACTTGAAAGAATACTATATGCGTCTATTGAAGAATAAAACTATATACCAATATACGTCTCATGGAAAATAATGGACTAGCTATACAACTCTAGCCATTCAAAGGGCACTGGAGAAGTGAAAATTTATACACGTCCCTTAATAAGGGAGGTTGGACATCAGAGCAAAAGAGAGAAAGGCACGTTTATCTCTGGACAAACAAATATCACTGTACTTTCGCACTGTGACCCCCAAAACATGACAATGTTGCTATACACGAACGTCCTCTTCTTTTGGTAGGTGCCCAAGTTGCTTGAGACACCAGAGCGCCCCTTGTGCCGCATGCTCTTGTGCAGCCTTCTTCTGAAGCTTACCATCGCTATGACACTCCAAAAGGGTCGCCGAAGCACCCTTGATCTCAACAACCACCTTGTAAGTGAACTTCCGAAGGTGGCTTGGCCCTTCCTCTTTACATAACTTGAATTCAGGAGGTTTCCAATAATTTGCAGCACATAGTTCAAAAAGGAATGATCTTGCTGTTTTGTGTACCATGTCACCATGATACACCTTTTTATTGCTTTTCTCTGTTGCTTCACTAGGCAGACGACCACTCTGTGTTGCCAACTTGGGTTGATTGTTCCTTCCATTATTGACATCATGTTTGCCAGACCCTGCTATAATTTGATTGTGGAATTTAGAACTCCTAGTGAAAGATGTTTCTGTATTTTGAAAAGGTATGTTCTCTTCATGTATATGTGGACTCTTCATTTTTACAGATATGTCAGCCTCAACATCGATTGGATCTTCATTATATCCTATCAGTTCTGATTCCCTCTTCCTGGCAACAATCAAAATCTCCTCAAGGGACTTGTTTCTGTGCTTATAACCGTAATTCTTCAGTTTAGAAAGTGTTTCTTGTGCAGCAAACTTTCTAGCGGCTTTTGAATTCCGATTTGCTGCAGTACAAATGATAATTTTGCTCTTTATGTTAACTTCTACTTTGACATGGTACTCTCCATCAGCTTTCATAGGTTTCGGAAGGCCTAACTCAAATCCATGACACTGACAAAGCTCTCGAAGTTCTCTCATCGGATTAGTGTGCATGTTGGCGAAGGTCAATACTGGCTTTAGAAGCATAAGCATTACCTTCCAAACATAGTTCAGGTTGAAGCCTGAATCTAAAAGCACTGCGCCAATACAAGATTCAACAATATCACCAAGAGCCTTGGGACATGCTGGTTCTTCAAGCAAGTCTTTCTCTGAATTGGAGAGCTTCACATACATCTCAAATTTACTTATTGCTGACGTGAGATGGTTTGAATCCTTTATAAGATGCTTATGGATAGATTTCTCAACCGCCGCATAAGCAAGCGAATCATTACCAACAGCTAACGATCTTAGATCTGTTATTTGACCAGGTTTTATATCCGGATAAGTAGAGTAGAGGTACGAAGTTATCACATACTCCAAAACAGCGTCTCCAAGAAACTCCAGTCTCTGGTAGCAGCCTCCAGAATGTTGACTAAATGAAGGGTGTACGAATGCTTGGAGAAGTAGACCCTTATGTTTGAACTTGTAACCTATCAATTCTTCAAGCCCGGCAATGTCAGTGTAGTCCATAAGAGATAAATTGATGGAGCTTGAATCTAATACCCTATAGAGAGCTGGATTATTAAAATCAACGTCTATTCCAATCCAATGCAGGAAAGCAAATGCAGCTTTGAATCCACCCTCAACAAGAAATGCTCCAATAAGCGATTCGACAACATCTGCAATCACTTTCCTATGCAGCCAATGATGTGACCTTGTACATCTCAGGTTACAGTTTTCTCTGTTATCTGGATGAATATCCATCTGGTGTAGTCTCACTTCCACGTCAGTATTGCAAACAACTTTACAAGGCCTTCCTGGAGCAAAGAACTGAGTCGGTTCAAACTGTTGATCCCGTATGTATACCTGCAATTTTTTTCTGATCGATAACTCATATAAATGTGAATTGTTCACTACATCAGAACGTCTCCTGGTCAATTGCCCTTCATCAAGTCCTTCATATGTAATAAACTTGTGACGTCCAACTACGTACTTCAAGAAAGCATCGCCTAGGACTTCAAATCGCTCCAAAGATATCCTCTCCAAACATTTCTCAGTAGTAAGCGCTTCAAGTATACCAGAAGCACTAATTTGAGATGCCTCTGGAAAAGAAGATAACATCACATCCTTCAACTCAATAGCCACCAGCAAATTCTCCAAACGATACATTAAAGAAGGTAACAAGGACAGGGAACTGCCCATATCTTTTGAAAACCCAATGACCTTCAAAGAGCATAATTCTGGAGGTAACTCCACGAAGTGCTCTAGTAATTCACGGCCCTCCGATTCTTAAAAATAATAATAACAAAAGATGTAACAACATTAGAAGTACTATACCTGGATCAGAACCATGCAAAGATTCACAGCAGAGTAAGATATTCAAAATAGGATTCAGTAATGCATTGGGTCCCAAGATTATAAATGTACTACTAGTCTACTATAGTAATCCCAGTATACAAAAGCCGGAGAAGGAAATAGGAAAAATAACAGATCCAACTGATTCCCAAGCAGTTTCCAAACTCTAAAGCAATCCACAAGCAGTTCAATAATTTTGAAACAATAAATAATAGAAGTTTACAAAGCAACTTCTCCGCGACATATATGTAGTTATATAAAATTTATTATGCTCTTTCTGAGCTGTGGTCTAATGGATGACAAAACATTCTTGGTAGCATAATGATATACTGATTACATTTTTTATCATGTCATAATAATCAGAAGTAATGAATAAGGTGTCTTGTTACGGTGGGACAACGGAATAACCTGTGGTCTCCGGTAACCGATTATGAAGCAAATTTCGCAGGTTGAAGATCTGTTTAGCCTTCAAAAGTGGCTGTTCAGGATGTGATAGCTCAATACGAAACCTTTCCTTGAAGTGTTCTGCATAAGTTGCACCACTGTGCTCGCTCCAAGCATTTATTTCGTCCAGAATGCCATCAACAAAGAAAAAGATATTGTTGTGGGGACTAAAGACTACACTGCCAACTACATCGGTTTTACTGAAGATTCCATCAAGAAGTCTCAGAGACTCATTTGATGAATATGAGGCATGCACAGACACATCTATAGGGTCTTTAAAAATCGGTGATGATAAACAGCGCTCAACTGCTGGCCAGTCAATCATAAATCTATCACCATAACACTTTTGCTTGATGGGAAGCAGAAGGTAAAATGTTGAATTGATTTCTAATGTAACATCATTGCCCAATTTAACATGGGGTGAAGTAAACTCAGATCTGTCCAGGAGAATCTTCAGACACATCTCTTGAAACTTGTGTGCAAGCATCATCTTCTCTTTCTCAAATGCTATTTTCCCCAAATGCTTAATTCCTGCTTTCACAATCCTGCCACGAGCAAGATGCAAATCAACTTGCAATGTTTCAGCTTCCACAGGAAGGGGATTGATCACAAAGAGACCAAACATCTGATATCGCCTATCTTCTGGTATGGGAATAAATTTAACATAGTAGAAATGCAAGTTCGATAAAGAATCCAACTTTAATCCCGAAGGTTTGAGAACTGCAGGAATTAACATCTCATGAAGCTCTTCTCTTAGACTATCATCTTCAACTTTGTTGTTTGATGAATTATTTGTTACTGATACTTTATTCTTTCTTGAACCTGGACCCGGCAGAAGAAAATCTGTCAAAGCACCCAATTTATGAAGTTTTACGCATGCCTTTAAGCATGCATCTCTCTTAGCTTCATCTTTTGACAGACATGGTTGACCATCTGCTTGACGGAAAGCAGCATTTGGTGGAAGAATTAGTCTGCAGATTATTCCCTCGATGCCATCAATGTAGAAGAACACTGGGGAAGGAGTAAAAAACATATCCCTAGGAAGGTTGTCGCAGTAGCAATGTAGTAGAGATACACTACAAGCAGTGCTAATGGAAGCACCGGTGTTATCCACTTGATAAATGTTCTCCTCGAGGCAATCAAACATATCATTTGAAGTTCTTGAGTCTATCTCTTCATTCATAATGCTTTCACCAGCAATATAACCATTAAGCAACTTTTCATGAGACTGATTTTCTCTCTCTAGGAGAACAACGTATTTAGATTTAGTCATCCGGGCACGCCCCCTTGATTGGATAAAACTAGCAACAGTTTCTGGAAGATCAAATCGCACAACAAGACAACACGTCTGAATATCAAGTCCCTCTTCACCTACGCTTGTAGCAACCAAAAGATTCACCTCACCAGAAGAAAACCTTTGAACAATAGCATCCATCTTATTCCTTGACATGTTCTTTGATCCTGAGTGGCAGCCCACAAGAAACTCACATTTCCAAAATTCAAGACACTTCAAGTTTTGGAGAATGTTTGATATTGCTCTTGCAACAGTTATTCTTTTCACAAAAACAATGCATTTCATGTTTTCCTGCAACCCGTATCTCGAAAGAACATTGATAAGAACAGAAAATTTATTTGAGAAGAAAGGTTCTTCAAGCTTCTCAAGGTCAAATGAACCAGCGTGGGAACCATCTGTTTTGTTGCGACTAAGAATAGAAGTTGCTCCGTTCAGGTAGTGATGTGCGAAGCTGGAAGTACTGCCGTTAAGATCGACCTCCCTTCTATCTAGCTTATCACCATCAAAGGACAAAAAGGTCCTCGCAGCCTGTGTTGCAGAGCTCCGAAAGAACCAAGTTCTTGCAAACAGAAAATAATATTTTCATGCAACCTCCATAAGGACTTCAGTTTCTTCTGAGAATCCTTGAAATCGCATAGGCTCGCTCTTAGCATGCGCTCGCTCTGAAGCTTTAAGCTATCAAGCTCTTTGATGCATATTGTGGTAAGGTTAGAGTGATTAACTGGGCCATAAAAGTACACCTCCATATCAGGAGATGCAACCACACTTTCAAGTTCTTCATTATCAACTGAACAAACCTTTGCATGAAGTAATTCCTCAAGACTGTTGATACATTTCGTGTAGTTAAGTTTATTAGACCCACCTTTCCCAATAATTGGTGAAGCAGTCATGCCAAAAACCCGAGGGAATTTCTCAACACTGTTACTATTATAGAATTCCTATTGATACAACAGGAGCAACAAGCAACTGGACCCAAAAGCCTACTCCTACCATGTGGATATAGTTTATAAGAAACAATTTAAATGAAAAGAGTATCAATGATGTACTGCAGCATGAGGTTTAATGGGTTAAAAACTAAACAACTAAGTATTCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0272200.1 | 4 | 25480436 | T | G |
| Osa04LNT0272200.1 | 4 | 25474718 | C | T |
| Osa04LNT0272200.1 | 4 | 25476078 | A | G |
| Osa04LNT0272200.1 | 4 | 25478632 | T | G |
| Osa04LNT0272200.1 | 4 | 25478835 | C | T |
| Osa04LNT0272200.1 | 4 | 25483602 | G | A |
| Osa04LNT0272200.1 | 4 | 25484012 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0272200.1 | osa-miR5796 | Cleavage | 5.0 | 10.465 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR5834 | Cleavage | 4.5 | 13.994 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR1440b | Cleavage | 5.0 | 10.001 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR6251 | Translation | 3.5 | 15.215 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR5079b | Cleavage | 3.0 | 11.732 | 1 | 22 |
| Osa04LNT0272200.1 | osa-miR5079b | Translation | 4.5 | 10.407 | 1 | 22 |
| Osa04LNT0272200.1 | osa-miR5079b | Cleavage | 5.0 | 11.794 | 1 | 22 |
| Osa04LNT0272200.1 | osa-miR395b | Cleavage | 4.5 | 6.624 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR395d | Cleavage | 4.5 | 6.624 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR395e | Cleavage | 4.5 | 6.624 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR395g | Cleavage | 4.5 | 6.624 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR395h | Cleavage | 4.5 | 6.624 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR395i | Cleavage | 4.5 | 6.624 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR395j | Cleavage | 4.5 | 6.624 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR395k | Cleavage | 4.5 | 6.624 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR395l | Cleavage | 4.5 | 6.624 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR395s | Cleavage | 4.5 | 6.624 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR395t | Cleavage | 4.0 | 6.624 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR395u | Cleavage | 3.0 | 6.624 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR159c | Cleavage | 4.0 | 13.408 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR159d | Cleavage | 4.0 | 13.408 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR159f | Cleavage | 4.0 | 13.408 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR160f-3p | Cleavage | 5.0 | 17.108 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR395m | Cleavage | 4.5 | 6.624 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR395n | Cleavage | 4.5 | 6.624 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR395p | Cleavage | 4.5 | 6.624 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR395q | Cleavage | 4.5 | 6.624 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR395r | Cleavage | 4.5 | 6.624 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR818a | Translation | 5.0 | 17.496 | 1 | 22 |
| Osa04LNT0272200.1 | osa-miR818b | Translation | 5.0 | 17.496 | 1 | 22 |
| Osa04LNT0272200.1 | osa-miR818c | Translation | 5.0 | 17.496 | 1 | 22 |
| Osa04LNT0272200.1 | osa-miR818d | Translation | 5.0 | 17.496 | 1 | 22 |
| Osa04LNT0272200.1 | osa-miR818e | Translation | 5.0 | 17.496 | 1 | 22 |
| Osa04LNT0272200.1 | osa-miR1424 | Cleavage | 4.0 | 20.531 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR1438 | Translation | 4.0 | 11.817 | 1 | 22 |
| Osa04LNT0272200.1 | osa-miR812f | Cleavage | 4.0 | 21.864 | 1 | 24 |
| Osa04LNT0272200.1 | osa-miR2099-3p | Cleavage | 4.5 | 21.772 | 1 | 20 |
| Osa04LNT0272200.1 | osa-miR1863b.2 | Translation | 5.0 | 21.947 | 1 | 23 |
| Osa04LNT0272200.1 | osa-miR395y | Cleavage | 4.5 | 6.624 | 1 | 21 |
| Osa04LNT0272200.1 | osa-miR5079a | Cleavage | 3.0 | 11.732 | 1 | 22 |
| Osa04LNT0272200.1 | osa-miR5079a | Translation | 4.5 | 10.407 | 1 | 22 |
| Osa04LNT0272200.1 | osa-miR5079a | Cleavage | 5.0 | 11.794 | 1 | 22 |
| Osa04LNT0272200.1 | osa-miR5148a | Cleavage | 4.0 | 11.912 | 1 | 24 |
| Osa04LNT0272200.1 | osa-miR5148b | Cleavage | 4.0 | 11.912 | 1 | 24 |
| Osa04LNT0272200.1 | osa-miR5148c | Cleavage | 4.0 | 11.912 | 1 | 24 |
| Osa04LNT0272200.1 | osa-miR5498 | Translation | 5.0 | 16.009 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0272200.1 | 4 | qChla4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0272200.1 | 4 | qChlab4-1 | Morphological trait | Shoot/Seedling | C2807 | RM241 |
| Osa04LNT0272200.1 | 4 | pss4.1 | Physiological trait | Source activity | RZ740 | RZ590 |
| Osa04LNT0272200.1 | 4 | qPH1-4-1 | Morphological trait | Dwarf | RM241 | C2807 |
| Osa04LNT0272200.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0272200.1 | 4 | nan | Morphological trait | Culm/leaf | RM3785 | RM1388 |
| Osa04LNT0272200.1 | 4 | nan | Morphological trait | Culm/leaf | RM3785 | RM1388 |
| Osa04LNT0272200.1 | 4 | nan | Morphological trait | Culm/leaf | RM3785 | RM1388 |
| Osa04LNT0272200.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)