© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0275100.1
GCTTCAAAAGAACCAGACTGGCTCGTTAAAAGGAAATAAATTACACGTAATCACCGCAATTTTCAATTTCCAAGTTTCTGGTACAATGGCATTTCCCTTCAGCAAATAAGTTCGTTGCTGTGAGGTTCTACCAGACAGAAGATGGGACGATTGAAGCACACATCCAAATAATTGATCGTGTATACCGTACAATTTACAGGGATAGCATATCGAGCTAATGACTACAATTATCGTGGCAGATTCTTTACCACAGTTTTAACAATTAGTGGAACCAAACTGAAGCTGCAAATCAGCAGTTTGTCTGTCATCGCTGCACACTAACCAGTTCTGCTGGGTCTGAACCACCAGACTACCAGAGTGCCATGAGTTAAAGCCGGTAAGAGTATTTATCCACCACGTCTGCTTCTGTCTGATTGGGTTTACATCCCTGTTTTCTTTGCTTAACAAACATGTATTTTCCCCAGTGCAGCAAGGGACGTGCTCAATCACCCAGCATTCTCCGTTCTCAAGTTGTCTGCCTCACTACACTAGAGCTCACAAGTTTTCAGCTCGCGCTGTGACTGATCTATTGACTGGTATTCTTTGGCAGATGCAAGATGATGGAAATTCATTGAAATCATCTCTTCCTGGTCTGATATCATCCGGTTCTCCCATTAGTCCCCTCTGCACTTTCTTTACCTTCTGTGAAAATATATCCCATCCCATCTGTTTCCGTCTCTTAAATAGTAAGTTGAGTTTTTTAGCATTTGGGCGAATGGTTCTCTTGTGGCCCATGTATCGCCTTCGTCCAGCTAAAACCTTGGCCATGTTTCCATTATTGTTTGTAACAAAAACATCACTCCCGTCACATACGATGAAATCAATTGCAGCCAATCTTGAAGAGAACGGAAGGAACGGTTTCAAATCATTCCCAGCAAGCATTTCTTTGGTGTAGTAGTTTGGAAAGAGATCCCTCAGAGGCTGGAGAGTTTCTTCTCCCCCATATATTTCTCCAGAAGCAACATACAGGTACGTGTCATTGCTAAAACCAAGAGCTCGGAGCATCAAACCAATTTCTTGAGGAGTCAGTGGACATTTGCCCCTACTGCGCTCATCCTCAGCGCTCAACTCAGGTAGTGTATCCCATCTTTTCCTAATTTCACCTAACTCCCTCCGTTCTTTATCACCACCACCATAGTAACAACCAGAAAATGCAAGCATGTCAGGCTCAAACCTCAAGTGAACGGCAACGTATCGTGAGCTCATGCTCCTCAGCTTGCGCACCAATTTCTCACCTAGAGTTTGTATGGAATTTGTAAATCTTAATGCATGGAAATTTACTCGGCAGCGTAACTTCTGCAATTCTTCATCAAGCTCGTTAGTGAGCCGATAATCAAACTTTGTTAGCTGCAAAGCTCGCCTTCGCATAAGGATAGGCAAAACTTCATCAATGTAAAAATCAGGCATGGATTTCCTAGGCGCACGCATGGTCCATGGGAGTTTATCCATTGACATCATCACCTCATAAGGGATTCTTTTGACAATAGTTACATCCTTTGATAGGTAAGAGATGAACCAGTCCACGTCAAAAATGTCAGAGAAGTCGCTATCATCCTTCCAGAATGAGTGGTGATCTAACTCAGGTACAACAAGTGTGGCATTCAATATTCGGGCGACAACAACAGCATCTGTTATCTGGAAACCCTATGCGCTGCTGATTTAGTCCCCCGCTAGTACCAATCAGCAAGTAACCAGTAGAACTGTTCTCCGGCACAGCAGATCTGAAATTTACGCTCCTCCTGCTGCATCCATAGTACAAGTTGGAATACCTCGATTTCCAAATATTTATGGGCTCGTTATTTCTAACCTGCTTGGATCGCCACCGGCTCCGGATCCGGGACCAGTCGGCGTCCGTAACGATGTGTCCCGTGAAGAGGGACACAAACCCTAGGACGAACAGCGCCGTTCCCAGGAAAACCGGCGACGGCTGCGTCCTCCTCGCTGCCCTCGGCGAGGCGCCGCCACCGTAGTGTGGCTTCGACGGATCAGGCTTCCTCCCCATCCCCCCAACCCCTCTCCCCTAAATCCCGTGCCCCTCGACTGCCTCTGTACGGAGGCCCGCCTTCCTCCGCGCTCCGTCGACGCCGGGGGTGCGAGAGCCACCGCGCCGCGCTAGATCGCGGAGGCACGGGAGCTCGCGGATGGTGCGGCCATGGCGAGAGGACGAGGCGGCCGGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0275100.1 | 4 | 27609254 | A | G |
| Osa04LNT0275100.1 | 4 | 27610530 | T | C |
| Osa04LNT0275100.1 | 4 | 27610565 | T | C |
| Osa04LNT0275100.1 | 4 | 27611760 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0275100.1 | osa-miR5516b | Cleavage | 4.5 | 13.363 | 1 | 21 |
| Osa04LNT0275100.1 | osa-miR1429-3p | Translation | 5.0 | 13.625 | 1 | 21 |
| Osa04LNT0275100.1 | osa-miR1865-3p | Translation | 3.5 | 23.663 | 1 | 24 |
| Osa04LNT0275100.1 | osa-miR2055 | Cleavage | 4.5 | 17.417 | 1 | 21 |
| Osa04LNT0275100.1 | osa-miR5338 | Translation | 5.0 | 18.193 | 1 | 21 |
| Osa04LNT0275100.1 | osa-miR5494 | Cleavage | 4.0 | 8.197 | 1 | 21 |
| Osa04LNT0275100.1 | osa-miR5516a | Cleavage | 4.5 | 13.363 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0275100.1 | 4 | nan | Resistance or Tolerance | Other soil stress tolerance | RM5586 | RM3916 |
| Osa04LNT0275100.1 | 4 | pss4.1 | Physiological trait | Source activity | RZ740 | RZ590 |
| Osa04LNT0275100.1 | 4 | rfw4a | Resistance or Tolerance | Drought tolerance | RM349 | RM1136 |
| Osa04LNT0275100.1 | 4 | gpp4 | Morphological trait | Seed | RZ569 | RZ565 |
| Osa04LNT0275100.1 | 4 | qCTS4-3 | Resistance or Tolerance | Cold tolerance | RM241 | RM317 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)