© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa04LNT0288400.1
GACATTCAGGTGAGATATAACCTTCTTCACTAACATTGTACTTAACTAAGTAAAAGTAGTACATACGTTAGACCAAGCCAAGGGTATTGGTCACGCTAGAGACCAGACATTCAGCATCAGAGTGCACTACTAAAATGGTGAAATTACCCACTACCCAGCAACATGGAACATGATTACATAATAACCAGGCTTCTACTTGATTTCTTCATTTCGACTTAATTCTACTTGCAAGAAGAAAAAAAAATAAAGAAAAGATCAAGGTCCTTGAGTTAGTCTTTGGAGTTCACTCTGTTCATCCAGTGTCTCCATGAGGAGAGGGGGAGCGTACTGCGCGTTCCCTTGGTGCTCTTCTGCATCTTGGCAGAATGAGAGGATTATGGTGTCAATCGACATCTCGACGACCTGGAAGAAAAGCTTGGCAACTATGAAACCAAGGGCCCATGATACCACTACAGGAACAAGAGGAGATGATATCTTGTTATGTGCGGACTTGTATTTGTGTGTGTCTAACATAAGGAACGCAAAGAGCGCACAGAACAAGCTCACACAGAGCTTCCCCAGAAAGAGGATGACATCTCCAATGACGTTAACTTTTCCAATGCGCAGTATGTTATTCATGATCAAACCAGTTGCAAGAACAGAAGCTTTGAAGAACCCTTTCCCGGTAATGGCGATCATTATATAGGCATTTCGATTCACAGACTTGAGGGTCCAGTCTATGCAGCCCAGGCAGCATTGAGAAGAGGATGATGTCATTTTCCCAAAGCAGCTTTCGCGAGCGGAATCAACTAGCTTCAACTTGCGTCTGAGGCATTCTAGTATAAACCGCACCCACTCAACAGCAGATACAACAAGTGAACCTATAGCAACTGAACCAAGGCTGTAACGCAACAACCGCTTCATTGAAGAAACAACTGTAACAAATGGTATGTCATGAGATATTTCACCACGTGCCCAATAGTATGAAGCAACTGATCCAGCAATCACGGTTGAAGAGCAAGCAATAAAGAATTGGGTTGCCCAGTAACAGCCAAATAAGTGGAAAAGAATGGCAATACCAATATGAGGGGTGTAATGGATGCTGTACCCACAGCAGTTGTCACAGTTTACTTTGCCCAACTTCAGATCATATGAGCAACAATCTGTATTGCAGTCATTTCGGAGAACTTGACCAGAGCTGAAGAGATGGAGTGTGGCAGAAAACCAGAACATATAAAAGATAGCGAGGATAAAGTATGGCACAACTGGGAAAATAATTAGTGCCTGAACTTCACCAATGACCTTCGCAGCAACCTTCAGGACAGGTGTTGCTATCAGTATACGACGGATAATAGCTATGGAGGTCAGAAATGCAATAATCATTACTACTGTCATCACCACTGTAGCAGCATGAAGGTGGCTTATTTCCCGCCCAGTTATGTGGACATATGGATCACTTTCGCCAATTACAACTGTTAAGGGATCATTGCCTAACCAGCCAGCTTTAATATAAAAAAACATGGTAACAGAGATTACTAGAGCATTGAAAACCACTACAGTTATCCATGGCGTGGCAACAACAAAATAACGAATCAGAAGCAACCAGATAACTGACAAGAAAAGAGGGAGCAGTCCACCGCAAACAATTAACACAGGCCATGACTTCCCAATGTCAGCAACGTATCTCTTCAGGACTGAAGATTTAGAATTGATGGCCTTGTGGATTGTTTTATCTATGAGAATATTTTCGTCGATGTTGATACCACCCATCTGTTGCCAATGCTTCAAAGAGACATTTGATGCTCGCGCAATAAATTGGCAGCTCCAGTAGACATTCACACTTGGAAATATAACAGGGTAGCATGGACCCTGCAGTTGAAGAGAACTATTTCTCATATCTGGTGTGAGAAACTCAAAATAGTCATAGTCCCTGTCGATCCAATCATCGACAGACAGGCGAATGTCCCCTTCTGGATAATCACAAACAAAGTTTAATCCGTCTGCTGCTGGCATGGGGCACTCCATCAGGCAGATGGCTTTGGCATCAGCAAGGTTAATCTTGTTGTCCTTGACCCCACTTTGGTACACCTGGTTTGGGTTCATCCAATATCTAACATCAAGCTCATGCAAATCCGGGTCACCATGCCTACTGCCACAAATGTTCCCTTTGTAGTCTAGTTCATAAGTAAGCCTGAGTGGGTTGCCCTGGTTGAATCCGAAGCTGGAGTTGACGATCATGGCGACCCAGAAGGCCGCGAAGAGCACGAGGAAGGCCAAATCCCGGCACCTCCGGTTGTGCCGAATGATGCCATCCCCGCCGCCGCCGCCGCCGACACCTCCCAGCTCATCCCCCCCGCCGCCGCCCGCCGCCGCCGGGTGCCTGCCTATGATGGCGCCGAGTGGCCCTCCCATTCCGCCGCCTCCGCCGCCGCTCGCCCTCGATCCGATGCTGTGGTAGCTCGCGGTTGTGCTTCTTGTGAGCGGAAGTGGGCGAGCTCAAGCTGGCTGGAAACTTTACCAACTTCACAGATTTCGCACAAATTTTTGTCCAAGATTTGATGGTGTTTCAAAAGATTTCGCTTAGATTTAAATCCAGAAAAGAGAATGGATGAAACGGTTTGGTGAAGACTGGATCATTA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa04LNT0288400.1 | 4 | 34781342 | A | G |
| Osa04LNT0288400.1 | 4 | 34782123 | C | T |
| Osa04LNT0288400.1 | 4 | 34782770 | A | G |
| Osa04LNT0288400.1 | 4 | 34783666 | A | T |
| Osa04LNT0288400.1 | 4 | 34783873 | T | A |
| Osa04LNT0288400.1 | 4 | 34784069 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa04LNT0288400.1 | osa-miR171c-5p | Cleavage | 4.5 | 23.755 | 1 | 21 |
| Osa04LNT0288400.1 | osa-miR1424 | Cleavage | 3.5 | 16.122 | 1 | 21 |
| Osa04LNT0288400.1 | osa-miR1432-3p | Cleavage | 5.0 | 17.294 | 1 | 21 |
| Osa04LNT0288400.1 | osa-miR1438 | Cleavage | 2.0 | 15.302 | 1 | 22 |
| Osa04LNT0288400.1 | osa-miR1441 | Translation | 4.0 | 18.883 | 1 | 21 |
| Osa04LNT0288400.1 | osa-miR1863a | Cleavage | 4.5 | 13.604 | 1 | 24 |
| Osa04LNT0288400.1 | osa-miR1882a | Translation | 4.0 | 24.565 | 1 | 24 |
| Osa04LNT0288400.1 | osa-miR1882b | Translation | 4.0 | 24.565 | 1 | 24 |
| Osa04LNT0288400.1 | osa-miR1882c | Translation | 4.0 | 24.565 | 1 | 24 |
| Osa04LNT0288400.1 | osa-miR1882d | Translation | 4.0 | 24.565 | 1 | 24 |
| Osa04LNT0288400.1 | osa-miR1882e-5p | Translation | 4.0 | 24.565 | 1 | 24 |
| Osa04LNT0288400.1 | osa-miR1882f | Translation | 4.0 | 24.565 | 1 | 24 |
| Osa04LNT0288400.1 | osa-miR1882g | Translation | 4.0 | 24.565 | 1 | 24 |
| Osa04LNT0288400.1 | osa-miR1882h | Translation | 4.0 | 24.565 | 1 | 24 |
| Osa04LNT0288400.1 | osa-miR2098-3p | Translation | 5.0 | 16.166 | 1 | 20 |
| Osa04LNT0288400.1 | osa-miR1863b | Cleavage | 4.5 | 13.604 | 1 | 24 |
| Osa04LNT0288400.1 | osa-miR812n-5p | Translation | 4.5 | 24.435 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa04LNT0288400.1 | 4 | Sh3 | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0288400.1 | 4 | iSh3(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0288400.1 | 4 | Sh3-gla | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0288400.1 | 4 | gpps4.1 | Resistance or Tolerance | Drought tolerance | RG214 | RG620 |
| Osa04LNT0288400.1 | 4 | nan | Morphological trait | Panicle/flower | RG620 | RG214 |
| Osa04LNT0288400.1 | 4 | Sh(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa04LNT0288400.1 | 4 | rpf4.1 | Resistance or Tolerance | Drought tolerance | RG214 | RG620 |
| Osa04LNT0288400.1 | 4 | nan | Resistance or Tolerance | Drought tolerance | RG143 | RG620 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)