>Osa05LNT0292800.1

CCAATCTGGGCTCAGTATATCCTGCACGGCCTAATAAATCCAATCCTGGGCTGGGGCTAACTTCGGAAGCGATGATCCAACGTTGGCTGGGCCGAAATTTGGATCATGATCAATGGTTACCATCCAACCTGGACTGGGCCCAAATTTGATGGTGATCATTGGTCCCAAGGGAAAAGTATACCGGAGGTCCCTGAACTTGTCACCGAGATAAAAAACGTCCTTGAACCGCAATACCAGACACCCGGGGTCCCCCAACTATACAAAACAGGTCACCCAACGTCCTTGACCCCAGTTTTGATCTACGTGGCAACTGAGTCAGCGTGGGGCCCACGTGGCCCCACATGTCAGGTGTCCACATCATCTCTCTTTCGCCTCTTCTCTCTCCCTTCCTCCCCTCTCTGCTCTCTCTCTCTCTCGCAGACCAGGCCGACGGGTAGGGAGCAGACGGCTGAGCGGCGGCGCTGCGACGGCGGCCGGCGGACGGCGGCGGCGGCGCCCTCTTCTTCTTCTCCCACTCCCTGGACCCTGCCGCTCCCGCTCCGTC

Explanation	CPC Score
noncoding	-1.04529

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts
Osa05LNT0292800.1	DTM_#DNAt_MULE_japo_Os0037	Chr5	.	2131362	2133252	375

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa05LNT0292800.1	osa-miR1849	Translation	5.0	18.41	1	21
Osa05LNT0292800.1	osa-miR2919	Cleavage	3.5	16.795	1	19

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa05LNT0292800.1	5	Ph5-1	Morphological trait	Dwarf	RG313	RZ556
Osa05LNT0292800.1	5	CORN5	Physiological trait	Source activity	C597	R1838
Osa05LNT0292800.1	5	nan	Resistance or Tolerance	Drought tolerance	RG313	RZ556
Osa05LNT0292800.1	5	nan	Morphological trait	Root	RZ556	RG313

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus