© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0293500.1
CCAAAAGAGCTCATAGGAAAATTGTCTGAGAATTGAAATTCCTTCAATCCAATGGAGTGTGCCCTGCATTTCCACTCTTAAAAACAGAGCTCGTAGTACCATTTCCATTTGTGCTCTATTATCTTCACTACCCCAATCAATAAGCCCTACATTACAGAAGAGCCAAAGCTCGGCGGTCAGAGGAGCTTTTCGTTCGTGTCAAACAAATCCCATAAAAGAAGAGGTAAGCCTATTTGTCTTGAGTCTTGACAGCGTCTCATCGCAGCTGCTTGTCTACATTTTACAGTGGGAGTTCTTCCCCGTCGACTTATCAGTTATCACCCTTGATTCTCATGTGCGTCACGTATATGAAACATAAGCTTAACTCCCACATAGAATGAGATAAATATGAAGGCAAGGACAGGAAGGGCATCCTTCCCAAGCATTCGTGACATGAGAAGTTTAATGCCGGAGGGTCCTACAACATAACCGACAAGGTTTGCCACCATAAGGCAGCTTATTGTCACAGCACCAGCAATTGCACTTAACTCCCGGTGAATGAACAACCCAAGGGCACTTCTTGGCTGGAACTTGTTGGATAGAGACTTGACCAATATTTCAGGGACGAAAAATAAGCATGTTAACCATGCCCATGAAATAAGTTTCCATTCCAGGTCATGCCAAACTGCTACAAACGTGAATACCACCCAGATACTAAGTAGTTTTCTTTGAGCACCCCCAAGAGGAATGTACAGATACCTGACCAACCATCTGTTAAAAGAAGCATGCCAGCTTTTCCAGAAACTCTCCAGATCATGACAATTATTTATACACCTTGGCATATTTTCAGGCGTCTCAACTCCTCCTACCAGTGACCAAAACCTGAAGTAGCGCCAAATCAGGAAGAATTTCAACCACATAAAGTTCAGCACCCCATAACTAATGATGAAGATCTCAAATGGCGATAATTGCTGCCATAATCGGCTAACTACAAAGGCGTTGTAGTGGAAAAAATGTGTCATAGCTTCCATAAGAAGGAAACTTAGGATCCACCTCACCCCATACCAAGATATTTGTGCAACTGAATAATTTTTCTGGGGTGCATCTAACTGCAAGATCGCTGGGCTGCAAATGCATTGTAGCTTACAATAGGTCCAGCGATGTAGAGTGGAGCATATGTCAAGTAGCATAAATATGTTAGTAATGTGTATTTGTCACCAATGAGCGCTCTCTCCTGCAAAGCAAAGTAGCATGTTTTGCCAGAATAACAAACTTGGCATCGCTGCATATGCTTCTTATGATCAAACTGAGAAGACCGGAGTGACCAGCAGTAATCGCATCCAAAGCTTATCATTCGTAATACAACAAAATTGAAGCAAATGTGCCACCGAAATGTACCCCGATGATTGTCTAGAAAAGCAAGCTGTTGCCCAAACAATGAGAATGAATAGCCTTCATAGACTCGGTTAAGTATAAGGACAGCTAAGTTGAAGCTCCAAATGAGCCCAACACAATATTTATATCGAGAAAATAGCTTCACTATGGAGTAGTTAATCAATGCTATTAGGAGAATGAAACTAACACAAGCACCATGTAGATAGCATAAATAGGTGACAGACAGGAGAAGCCACACCAAAGAGGCCCCTCTTCCCTTCAAGCTGTAGCAGTAGCGAAGCATATTCGCCAACATCAGAAATGCACCCATCACAATGGTAAGAACAGGTAAGTTCCCCCGGAAATTTCTCCATTGTGCATCGGACAAGTCGTTCAGATGGCCAGCGAGTGAGCCTGCTCGTAGGCCGTACAACCTCCCAGAGTAATCATGAGAGAGGCGAAGCGACTTCCGGATCACGACGAGGTAGAACCCCAGCGCGTAGGCGCAGAGCGCGGCGAGCTCCAGCCGCCTCCACGACATGCTGAGAATTGAGTTTGGCAAGTGAAGATCTCTCCCAACGGCGGGGAGGCTCACCGCTCGCGTCTCCGCCCCTGATACCAATGATGAGGGAGCGTGATCCGCCCGGCGAGCGGCGGATCCGCCGCCTTCTCCGACCTAAAATAACCGGATGCGGAGAAGGCCAAGCGAAGAGGATGAGGTGTGACGGGGCCGCGGCGAGGATTCCACCGGAGGCGGCGGAGACGACGGCGGCGGCGCGGAGGCGGAGACGGTGGTGCGTGTCGCCGGCGACC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0293500.1 | 5 | 2535714 | C | A |
| Osa05LNT0293500.1 | 5 | 2529280 | T | C |
| Osa05LNT0293500.1 | 5 | 2529323 | A | T |
| Osa05LNT0293500.1 | 5 | 2529549 | T | A |
| Osa05LNT0293500.1 | 5 | 2529574 | C | G |
| Osa05LNT0293500.1 | 5 | 2531309 | G | A |
| Osa05LNT0293500.1 | 5 | 2531523 | T | C |
| Osa05LNT0293500.1 | 5 | 2532170 | T | C |
| Osa05LNT0293500.1 | 5 | 2532194 | G | A |
| Osa05LNT0293500.1 | 5 | 2532526 | A | C |
| Osa05LNT0293500.1 | 5 | 2532780 | G | A |
| Osa05LNT0293500.1 | 5 | 2533486 | T | C |
| Osa05LNT0293500.1 | 5 | 2534267 | C | A |
| Osa05LNT0293500.1 | 5 | 2535490 | G | A |
| Osa05LNT0293500.1 | 5 | 2529471 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0293500.1 | osa-miR164a | Cleavage | 4.0 | 15.711 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR164b | Cleavage | 4.0 | 15.711 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR395b | Cleavage | 4.0 | 18.003 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR395d | Cleavage | 4.0 | 18.003 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR395e | Cleavage | 4.0 | 18.003 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR395g | Cleavage | 4.0 | 18.003 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR395h | Cleavage | 4.0 | 18.003 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR395i | Cleavage | 4.0 | 18.003 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR395j | Cleavage | 4.0 | 18.003 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR395k | Cleavage | 4.0 | 18.003 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR395l | Cleavage | 4.0 | 18.003 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR395s | Cleavage | 4.0 | 18.003 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR395f | Cleavage | 5.0 | 18.003 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR159a.1 | Cleavage | 3.5 | 19.316 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR159b | Cleavage | 3.5 | 19.316 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR159c | Cleavage | 2.5 | 19.316 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR159d | Cleavage | 2.5 | 19.316 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR159e | Cleavage | 2.5 | 19.316 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR159f | Cleavage | 3.5 | 19.316 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR164c | Cleavage | 4.5 | 15.711 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR164d | Cleavage | 4.0 | 15.711 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR164e | Cleavage | 4.0 | 15.711 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR164f | Cleavage | 4.0 | 15.711 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR535-3p | Cleavage | 5.0 | 17.343 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR395m | Cleavage | 4.0 | 18.003 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR395n | Cleavage | 4.0 | 18.003 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR395p | Cleavage | 4.0 | 18.003 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR395q | Cleavage | 4.0 | 18.003 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR395r | Cleavage | 4.0 | 18.003 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR1430 | Cleavage | 4.5 | 22.561 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR1430 | Cleavage | 5.0 | 19.59 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR395y | Cleavage | 4.0 | 18.003 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR5494 | Cleavage | 4.5 | 13.545 | 1 | 21 |
| Osa05LNT0293500.1 | osa-miR5521 | Cleavage | 4.0 | 14.731 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0293500.1 | 5 | Ph5-1 | Morphological trait | Dwarf | RG313 | RZ556 |
| Osa05LNT0293500.1 | 5 | CORN5 | Physiological trait | Source activity | C597 | R1838 |
| Osa05LNT0293500.1 | 5 | nan | Resistance or Tolerance | Drought tolerance | RG313 | RZ556 |
| Osa05LNT0293500.1 | 5 | nan | Morphological trait | Root | RZ556 | RG313 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)