© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0295900.1
TGTTGAAATTCCAGATGATATATTGATATCCAAACATAAACTAAAATGAGATGTAGTCCAGCTTTCTAGATGCCTAACCCCACCAGTAGCTAGGACCCTCCCTGATCTGGTTGGTGTCAAGTGAGGATTGGTTGAGCATGCTTTCGCTGCTCATGGTGGAGTATTGTGAGAACTATTCGCTCTATTATTGCCTCAGCATGTGATCGAGCGTAGTGGAGCGCTCTTAGAATTATTCGCTCTATTATTGCCTCATGATGTGATCGGTATTAAGCCGCATGTTAACATCAGGGAGGGAGGGAGGAGGGGATCCATTCTTCTTTGTAATAAAGAACTTTTGATAAGAAATTCTTCTGCTAAAGAATAGATGAGCCTATAAATAGAAGCTTCAGCGCACTCTATATTATATGAGATAACAAAAGAAAGAGTCAAAGGCTCAAATCCATCGATATGGCTGCAAGACTGTTTGCGATTCCCCATGAAATCCAAATATGGAAATCAAAAGGCTTGAAGTAGATACTGTTGGCATACACACAACCATAGAGTTCATCTTCAGAACCAAATCCACGTTCTTGAAAATATGAGGAGGGTGCTGCTGGAAGAACAACAATCGCTCATCGTGATGGCTGCCCACCATGGTGACCGTAGAAACTAGCATAGAAAAAAGTAGATATCTCAAGTGACTTTGTTCATTTACGTTGGGATAGACAAGTAACTACCTTTTCTATTTTAGTTTCTATGGTCACTTTGGTGGCAGCCATGATAGACAGAAACAAAGGCTCACCGATGAAACCCAGGACTTGCTCTACTTCAAGCTTATTGTTTTCTATATTCTGGATTTCCTGAGGAATCACTAGTAGTCGTTCAGCGATATCCATGGCTTTGACTCTTTCTTTCTTGTCCCGCACAATATAGAGTGTGATGAAGCTTCTATTAATAGGCTTGACTTTAGCAGTAGAATTTCTTATTAGAAATTCTATTTTTAATAGACTATACCATAGAGAATTTTCCTAGGATTCATGTCCTCCATTAGTGCGAAAAAGATTGAATCTCTTGAGTCCCCCTTGGTTTTGACACACAGCTTAATCCTGATCACATCCTGAGGCAATAGTAGAGTGAATAATTCCGAGTACTCCACCACGAGCAGTGAAAGCACGCTCAGCCAATCCTCACTCACTGCTCATTATGTGCTCAGCGAGATCGTTGCCAAGGCCATGCTTTATATATTACTAGAAAAAATGCCCGTGCGATGCAACGGGTGGAGACTATTTTAATCTTATTATTGTTATACGGTTAGTTAAGATGAAATTCATTGTGAGAATTCGTTTGGATATATTTTTTTTTAGAAAATCATGTGCTACAATTAGAAGTCCGATCATCTCAAGTTAGTATGTATTTTTTTAAAGGGATTTTTTATACAACTCCTTTTGTATTTCCAAAACCGAACGAACTTAAAATCCGACTCAAATAAATATGGATTTGTATTTCCAAAAGCGAACGAACTTAAAGACCGACTCATACACGGATGACGTACCAAAATACCGGCAAAAACATCTTCAATTTTTATAATAGTAGAGATATAAAAAGGTGAGCAAAATATATTTTATTGGAAAAAAACTGTACTTGAGATATTCTGAGTCCGTTTGGACTAAGGGTCATGTATCTATTCACCTGTTTGGAATGAAGGAAATGGTTGAGCAATTAATATGAAATACTGTTGAAAACCTACGATTTTGCAGGAAACAGAAACATTCAACTGGAACATATTTCAGTTGAAACCTATGGTAGCATATTGCAGTAAGCAACTTAGAACTGATATGTCTCTGAAGCAAGCATGCAGTAAATTTTTTATTTTTTTAGAACTGACATCTCTGAAGCAAGCATGCAGCAAGTAGTGGCATAGATTAACTTGTTGAGTTTAACAATATATGCCAACTAGACCATCAACAAAACATAGGCATCGGGCATGTATCTCTATTTCTGCCAAATCTTTGCTGTAATGCCTGCTTACAACAATTGGTTATTGAAAAAATGCGTTACAATTTAGCACTACCCAGCTTACATTCCTTTTCTTCCACTCATGTTAGAACCTCAAAATTTTCTAAGACAAATATTATTAACATCAACTAGGAAGTACTTATGAATCATCATCACAGTGAGCCACAACAGTGCATTCTGCTAAAGCTGCAAGTAGCCGTGGCATTGGAGGCATATCAAGCTCCTGTAAACCCTCAAGAACCCGGACCACTTCATTCATTGTTGGCCGATCAATCTCATTCTCTTGGATGCACCAACATGCAACTTTGCAAACTCTTTCAACCTCTACTAGACTGAAGTCACCATTTAACTGCGGGTCTACCAAACTCTGGACATCTCCCTCATGAAGCTTGCTAATGGCTTGCACAGGGAAAAAGGCAACTTGATCACTATTGTCATCAGTATGAACTTTATATGAATTCCTTCTTCCTGATAAGATTTCCAAAAGTACCATACCGAAGCTATAAACATCAACTTTTGGTGTAATAGCAACTCCACTAATCCACTCTGGAGCAAGATATCCTACTGTGCCTCTGAATGTAGTCAAAACTCGGCTAAAGTTCCTTCCTACAAATGCTGCCATCCCAAAGTCTGCAATTTTAGGGGCAAACGATGCATCGAGAAGTATGTTTTCTGGCTTAATATCACAATGTATGATGCATTCGTTGCAGCTCTGATGCAAGTAGGACAATCCTCTAGCAACTCCTATGGCTAGGTTATACCTGGTGGTCCAATTCAGGACAGTAGCCTTGCTCTGAAACAGATGGGCATCAAGAGAACCATTTACCATGTGTTCATACACAAGTAGTCTCTCATCACCTTCGCAACAGAAACCAATCAATTTGACAAGGTTGATATGTTGGATCAATCCAATTGAGCTCACCTCAGCCCTGAATTGCTTCTCTCCCTGACGAGCACCGTCAAGCTTTTTCACTGCTATAATAGTCGAGTCACTTAGCACTCCCTTGAATACAGAACCAAAACCACCTCCTCCCAGCTTTTCAGAGAAATTTTTAGTAGCATGACATAAATCATTGTATCTAAAGGCCACAATTCCACCACTACATTGACTGTCGTGTAATTGTGCGCCACAGAACCTTAGTTTCTTCCTTAATACCAGTAAGATCAGCATGAGCATTACCAACAAACTGACAATGCTTGCAGCAACAACTGCAACGATTGGCTTTATTTTGTTTTTTCTCGAACTTGGCACATCTTTGGCGGCAAGCCGAAGGTAGAGAACATCTTCAGAACTATTATCAATGCCATCATTCCTATTTACACTAAGCAAATCTCCATGCCAAATAGAGCATTTACTATTTTCGTAGGAATAGGCATTGCAGGAGCAGTAACTGAGACAAGCCTGTGCACATTTGCTCTGAGTGGTAGCATTGTCTACAATTTGGGGGTTGTAGGGCAATCTAACACGAGCTATGGTGTGGAACACGTCTGTGGAGCTTGTCGTGTTACTGCAATCTAACGGAGTGTTTCTAGAGCAACCTGCTGTTCTATTATCAAGCTCCCAATCTTGAGGTGACTTTTGAGAGAAGCTCTCCATACAGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0295900.1 | 5 | 3956583 | C | T |
| Osa05LNT0295900.1 | 5 | 3891035 | A | T |
| Osa05LNT0295900.1 | 5 | 3876628 | A | G |
| Osa05LNT0295900.1 | 5 | 3876794 | T | A |
| Osa05LNT0295900.1 | 5 | 3877715 | A | T |
| Osa05LNT0295900.1 | 5 | 3878813 | G | A |
| Osa05LNT0295900.1 | 5 | 3881033 | A | G |
| Osa05LNT0295900.1 | 5 | 3881448 | A | G |
| Osa05LNT0295900.1 | 5 | 3881712 | A | G |
| Osa05LNT0295900.1 | 5 | 3881954 | G | T |
| Osa05LNT0295900.1 | 5 | 3889951 | G | A |
| Osa05LNT0295900.1 | 5 | 3890358 | C | A |
| Osa05LNT0295900.1 | 5 | 3891698 | G | A |
| Osa05LNT0295900.1 | 5 | 3880425 | G | A |
| Osa05LNT0295900.1 | 5 | 3876973 | C | G |
| Osa05LNT0295900.1 | 5 | 3891706 | C | A |
| Osa05LNT0295900.1 | 5 | 3892179 | C | T |
| Osa05LNT0295900.1 | 5 | 3892455 | A | G |
| Osa05LNT0295900.1 | 5 | 3892540 | T | C |
| Osa05LNT0295900.1 | 5 | 3892744 | T | C |
| Osa05LNT0295900.1 | 5 | 3893099 | T | C |
| Osa05LNT0295900.1 | 5 | 3893105 | A | G |
| Osa05LNT0295900.1 | 5 | 3893185 | T | C |
| Osa05LNT0295900.1 | 5 | 3893417 | A | G |
| Osa05LNT0295900.1 | 5 | 3893581 | C | T |
| Osa05LNT0295900.1 | 5 | 3893610 | T | C |
| Osa05LNT0295900.1 | 5 | 3893771 | A | C |
| Osa05LNT0295900.1 | 5 | 3893931 | G | A |
| Osa05LNT0295900.1 | 5 | 3894126 | T | C |
| Osa05LNT0295900.1 | 5 | 3894584 | T | C |
| Osa05LNT0295900.1 | 5 | 3894594 | T | C |
| Osa05LNT0295900.1 | 5 | 3894635 | A | G |
| Osa05LNT0295900.1 | 5 | 3894663 | C | T |
| Osa05LNT0295900.1 | 5 | 3894665 | G | A |
| Osa05LNT0295900.1 | 5 | 3932043 | C | T |
| Osa05LNT0295900.1 | 5 | 3932103 | G | A |
| Osa05LNT0295900.1 | 5 | 3932105 | T | C |
| Osa05LNT0295900.1 | 5 | 3955567 | G | T |
| Osa05LNT0295900.1 | 5 | 3956240 | A | G |
| Osa05LNT0295900.1 | 5 | 3956432 | G | A |
| Osa05LNT0295900.1 | 5 | 3957264 | T | C |
| Osa05LNT0295900.1 | 5 | 3958281 | A | G |
| Osa05LNT0295900.1 | 5 | 3959126 | T | A |
| Osa05LNT0295900.1 | 5 | 3959341 | G | T |
| Osa05LNT0295900.1 | 5 | 3959435 | C | T |
| Osa05LNT0295900.1 | 5 | 3959618 | A | G |
| Osa05LNT0295900.1 | 5 | 3959627 | T | A |
| Osa05LNT0295900.1 | 5 | 3959657 | A | G |
| Osa05LNT0295900.1 | 5 | 3959662 | C | T |
| Osa05LNT0295900.1 | 5 | 3964343 | G | A |
| Osa05LNT0295900.1 | 5 | 3964445 | C | T |
| Osa05LNT0295900.1 | 5 | 3964462 | T | C |
| Osa05LNT0295900.1 | 5 | 3964818 | A | G |
| Osa05LNT0295900.1 | 5 | 3965182 | A | G |
| Osa05LNT0295900.1 | 5 | 3965290 | A | G |
| Osa05LNT0295900.1 | 5 | 3965314 | A | G |
| Osa05LNT0295900.1 | 5 | 3966024 | A | G |
| Osa05LNT0295900.1 | 5 | 3966027 | A | C |
| Osa05LNT0295900.1 | 5 | 3966120 | T | C |
| Osa05LNT0295900.1 | 5 | 3966476 | C | T |
| Osa05LNT0295900.1 | 5 | 3966655 | T | C |
| Osa05LNT0295900.1 | 5 | 3966662 | G | A |
| Osa05LNT0295900.1 | 5 | 3968676 | T | C |
| Osa05LNT0295900.1 | 5 | 3968706 | C | T |
| Osa05LNT0295900.1 | 5 | 3969225 | G | A |
| Osa05LNT0295900.1 | 5 | 3969672 | G | A |
| Osa05LNT0295900.1 | 5 | 3970395 | A | G |
| Osa05LNT0295900.1 | 5 | 3970597 | G | A |
| Osa05LNT0295900.1 | 5 | 3970975 | C | T |
| Osa05LNT0295900.1 | 5 | 3971866 | A | G |
| Osa05LNT0295900.1 | 5 | 3958980 | G | A |
| Osa05LNT0295900.1 | 5 | 3878716 | T | C |
| Osa05LNT0295900.1 | 5 | 3879483 | C | T |
| Osa05LNT0295900.1 | 5 | 3956954 | T | C |
| Osa05LNT0295900.1 | 5 | 3958668 | T | C |
| Osa05LNT0295900.1 | 5 | 3966111 | G | A |
| Osa05LNT0295900.1 | 5 | 3877146 | A | C |
| Osa05LNT0295900.1 | 5 | 3891233 | G | A |
| Osa05LNT0295900.1 | 5 | 3891291 | C | T |
| Osa05LNT0295900.1 | 5 | 3891421 | T | C |
| Osa05LNT0295900.1 | 5 | 3879162 | A | G |
| Osa05LNT0295900.1 | 5 | 3880862 | T | G |
| Osa05LNT0295900.1 | 5 | 3880866 | A | G |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa05LNT0295900.1 | DTM_#DNAt_MULE_japo_Os0120 | Chr5 | - | 3891054 | 3891611 | 557 |
| Osa05LNT0295900.1 | DTM_#DNAt_MULE_japo_Os3333 | Chr5 | - | 3882005 | 3882261 | 256 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0295900.1 | osa-miR5794 | Translation | 4.5 | 15.5 | 1 | 21 |
| Osa05LNT0295900.1 | osa-miR1861o | Cleavage | 4.5 | 14.256 | 1 | 22 |
| Osa05LNT0295900.1 | osa-miR1861o | Translation | 5.0 | 17.654 | 1 | 22 |
| Osa05LNT0295900.1 | osa-miR393a | Cleavage | 5.0 | 17.378 | 1 | 21 |
| Osa05LNT0295900.1 | osa-miR166h-5p | Translation | 4.5 | 9.334 | 1 | 21 |
| Osa05LNT0295900.1 | osa-miR166h-5p | Cleavage | 4.5 | 9.06 | 1 | 21 |
| Osa05LNT0295900.1 | osa-miR393b-5p | Cleavage | 5.0 | 17.378 | 1 | 22 |
| Osa05LNT0295900.1 | osa-miR444a-3p.2 | Translation | 3.0 | 15.755 | 1 | 21 |
| Osa05LNT0295900.1 | osa-miR529b | Translation | 4.0 | 14.968 | 1 | 21 |
| Osa05LNT0295900.1 | osa-miR444b.2 | Cleavage | 2.5 | 15.755 | 1 | 21 |
| Osa05LNT0295900.1 | osa-miR444c.2 | Cleavage | 2.5 | 15.755 | 1 | 21 |
| Osa05LNT0295900.1 | osa-miR444d.2 | Translation | 3.0 | 15.755 | 1 | 21 |
| Osa05LNT0295900.1 | osa-miR444e | Translation | 3.0 | 15.755 | 1 | 21 |
| Osa05LNT0295900.1 | osa-miR444f | Cleavage | 2.0 | 15.755 | 1 | 21 |
| Osa05LNT0295900.1 | osa-miR1850.2 | Translation | 5.0 | 12.153 | 1 | 21 |
| Osa05LNT0295900.1 | osa-miR1861a | Cleavage | 4.5 | 14.256 | 1 | 22 |
| Osa05LNT0295900.1 | osa-miR1861a | Translation | 5.0 | 17.654 | 1 | 22 |
| Osa05LNT0295900.1 | osa-miR1861d | Cleavage | 3.5 | 14.256 | 1 | 22 |
| Osa05LNT0295900.1 | osa-miR1861h | Cleavage | 4.5 | 14.256 | 1 | 22 |
| Osa05LNT0295900.1 | osa-miR1861j | Cleavage | 4.5 | 14.256 | 1 | 22 |
| Osa05LNT0295900.1 | osa-miR1864 | Cleavage | 4.0 | 23.491 | 1 | 24 |
| Osa05LNT0295900.1 | osa-miR1862e | Translation | 5.0 | 21.165 | 1 | 24 |
| Osa05LNT0295900.1 | osa-miR2275a | Cleavage | 4.0 | 18.55 | 1 | 22 |
| Osa05LNT0295900.1 | osa-miR2275b | Cleavage | 4.0 | 18.55 | 1 | 22 |
| Osa05LNT0295900.1 | osa-miR5505 | Translation | 5.0 | 23.405 | 1 | 22 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|---|---|---|---|---|---|---|
| Osa05LNT0295900.1 | osa-MIR2871a | 100.0 | 121 | 1 | 121 | 3e-59 | 224 |
| Osa05LNT0295900.1 | osa-MIR2871b | 96.454 | 141 | 1 | 141 | 2.15e-61 | 231 |
| Osa05LNT0295900.1 | osa-MIR5794 | 100.0 | 436 | 1 | 436 | 0.0 | 806 |
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)