© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0298400.1
AAATCATGTTCAGACTTCAGACTAATTTTCGACATATAAGCAGACACGGGCCCCTCATTGTTCAATCTTTCCATCAGGTACCAGAACAAGATGATGTTTTCTACTACATAATGGTTTGTTTCGAGCTAATCAAAATTCAAATCAGGGCAAAAACATGATACACCGGAAATAACATGCTGAGTTTGAGGACCAAAATCTTGATGTGCAAACATGAATTACTTGTTCTAATCAATTTTACAGGAGAATCTAGGGGGGGGGGGCAAACACACTGAGATTCGGCGATGTTAGATAGGGAACCCGTCCCATGTTCCCTTGAGTTGCCCAAGAAATCTGATGTTCAGAGAGTTAAAATCTGCGGCCTTGAGTCACTTTGCCTTCTTAATAAGAGTTGATGTGCGGAATTCTGCGTCATCCTTGATGAAACTCCACCAGAGATATGTGAGAGGAATGGTGCTTGCATGCCACAGCGAGTGTGCATCAGCGTATCCCTTGTACGGAGGAAAGTCGTATACTTCGAGAAGCATAGCAAGTGCACCACCAAAGACAACCACCCAAAGCTTGAATCGTGATGGATGCTGGGTTATGCCAGCCCAAATTGCCCATGCCAGAAGTTGAACCACAGCCATCACCACGCAAACTTTCATGTTCCACCCATAGTCAAGCTCATAGAAGTTAAGATACAAGATGTGTGTTGTAACAAATGCCAAAATTGGAGCAGCAAACATCACCCTGGTAGCCTCGTCCTTGACATTGAAAGTCCTTAACAATGAAAGGATTAAAGAATAGCCAAGTAGAGCCACAGCTGAAGAGTAATCCAACTTCTCAGTCAAGTCTATATCCCTAGTATGGAATATAGAGCTCCAAAACCATGCGTTCATTGATAATATTGCATATATATGCCATAATCCAGTGTATTCGTAGTATGTCCTCTTAGTTTGGGGTCTAACAGGTAATTTGTAATTCACCAGCAGGAAAAATGAAAGCCAGCCAGTGAAGTGCATCAATAGGTTGACAGCAGACAGTGCAGCTGAGAGTGGCTCTTGGAAGACAGAAACACGTATGAAGGGCCATTTTCCATGATACTTAACAGGGTTCAGACCACGTGATTGCCTTTCACCTTCTCTTTGCATCATGCAGTAGTAACGGCAGTCATTCATACAGTTTAGTTGCTTCCACTGCATGTATAGGGGCTCCTGCGTGTACCAAGAACTTCCAACAGACGCGTCATCATTCCCTGGGGACTGGCAGTGGCTTATGATGTTCTCCCCAATAATCCCTGTAGTATGACACTCCTCCACGCAAGTTCTGTACTGCGGATCAACATCGCCAAGGCTGGCGTCGACGGAGCCGAGCACGAACCCGACGACGAGGAGCGCAGCCAGCCGAGCCACCCAGCCGCCGCCGCACCCAGCCATCGCACCCCCCCCCCCCCAACTGAAACCAGCGGGATGCTGCACACGATCAGACAATGCACGCACGATCCACGAACTGTAAGACGACCAGGTCAACCGCGAGCGATGGATCGATCGATCGATCGATCTTACCAGAAACCCGGATCCTCACTCCACGGCGGCTCAGGTCCCGGTAGAGCCACCGAGGAGGGCGTCTCCCCCGAGGAAGAAGAAGAACCGAGGGAACGGGGACTCGCCGGAGGGAGGCTGGGCTTGCGCGGCGTCGGGCTTCGCGCCCCGCGGCGAAGAGCTGAGCGGGGGTCTGGGCGGGTGGGGGACGGAGAGGAGGGGTTCGGGAATGGGGGGAGAAGAGAGCGGCGGCGGGGGTGGCGGCCGCCGGCGGCGAGGTTTGAGGCGGAGGAGGAGACGAGGAGAGAATGTGATGA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0298400.1 | 5 | 7400648 | A | G |
| Osa05LNT0298400.1 | 5 | 7402556 | G | A |
| Osa05LNT0298400.1 | 5 | 7399761 | C | A |
| Osa05LNT0298400.1 | 5 | 7401236 | C | T |
| Osa05LNT0298400.1 | 5 | 7401245 | A | G |
| Osa05LNT0298400.1 | 5 | 7401473 | A | T |
| Osa05LNT0298400.1 | 5 | 7401934 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0298400.1 | osa-miR156c-3p | Cleavage | 4.5 | 13.584 | 1 | 22 |
| Osa05LNT0298400.1 | osa-miR156g-3p | Cleavage | 4.5 | 13.584 | 1 | 22 |
| Osa05LNT0298400.1 | osa-miR166d-5p | Translation | 5.0 | 11.854 | 1 | 21 |
| Osa05LNT0298400.1 | osa-miR166h-5p | Translation | 4.5 | 11.854 | 1 | 21 |
| Osa05LNT0298400.1 | osa-miR172d-5p | Cleavage | 5.0 | 20.227 | 1 | 20 |
| Osa05LNT0298400.1 | osa-miR1854-3p | Translation | 3.0 | 18.015 | 1 | 22 |
| Osa05LNT0298400.1 | osa-miR2871a-3p | Cleavage | 3.0 | 18.493 | 1 | 21 |
| Osa05LNT0298400.1 | osa-miR2871b | Cleavage | 3.0 | 18.493 | 1 | 21 |
| Osa05LNT0298400.1 | osa-miR2928 | Translation | 3.5 | 16.128 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0298400.1 | 5 | QKw5 | Morphological trait | Seed | RG182 | RG13 |
| Osa05LNT0298400.1 | 5 | An7-glum | Morphological trait | Panicle/flower | nan | nan |
| Osa05LNT0298400.1 | 5 | gnp5.1 | Morphological trait | Panicle/flower | RM194 | RM249 |
| Osa05LNT0298400.1 | 5 | snp5.1 | Morphological trait | Panicle/flower | RM194 | RM249 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)