© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0300700.1
GGATATTATATTTATTTTAGAAAAGTAAATTAGATTTATAATTGTACTTATAGAGGAACGGAGGGAGAGACTCCCTTCGTCACAAGAGTGTAATTCTACCATAAGTTTTCATAACTACAAAAGCATTTGTGCATGCGGTCAAAATATATTTTCACATGCAGTTGGACCAAACATCTGCGAAAATAGGAATTTTCCATCCAGGTGACACACCGACATGTGAAAATCAGTTTTCCTCATGTGGGTATTTATGTCGTCCGCATGCTGGATCCCGCACCCGCTGGTTACCCGAGCTCGCGGCCGCCTGGATCGGCCAGCCCATGCCCTCCGGGCAACGGAGAGAGGGAGGAGAGGCGACGGGATCAGCGCTGCCCAAGCTCACCGTAGCCGCTGCTCCTACCATTGCCATCGCCCGCCGGTGGTAGATCCGCCTAACCAGATAAGTGGGGTGATAATTCTTGGAGAGAGCGGAGAGCAGGTCAATCATGATGGAGAGTGGCAGTGATGGGGAAGGTAGAATTTTGCTTTGGAATAAATTTATCTACCTTAATGAAATGAAACCAAATCAGCGAGAGAGTTTAAAAAATAAATTGTATATATCAGCAATAACCATATTTCTCTTCAGTTGTATATATCAACGTCAGGCCCTGCAATTTAGTAGCAATTGACTATTGATCCTAGAAAGCAATGTCAGAACTTTTTTCCAGATGGTCAATTTCAGAAACATGGTCCCCCTTCAAAAAATTTCTTTGTTCAGAGATCATAGTACAAAAGTTGAGTGCCTGTAGTTAATTGGACAGAAATGGTCCATCTACAATGAAAATGCAGAACAAGGGATAAATGGTAGGCAATAGTGTTATATTGACCATATGCATTTAAGATATTTTGTCACAACCTGACCATGTAAGTGAGGTGATAATTCTGCAACCACCATATAATAAATCGAATTGTCATTTTCATTAAGGTGAGTCAGTGTAGGCAGCGCCGCATGCAGTTCTTCTCCATCACCAATGAATTGCCTGCCCATGTCAATTCTAGGTGCTGCTTGAACTCTGAAAGCAGAGATGGAAATTTTACCCCTTTTTAACTCTGAATGCAGTAGTGGTAATTTACTTCTTTTTCTAATATCAAGAATAAACAATAATTGAGGCCTACTTTAAATTTTAGTTATAAATTTGGAAAGAAGCTTGCTTGAAAGTCGATTTATTCAGGTATTTTGCAATTGTAAGCAACAGTTGTACTCATGAAAAAAGACCAAGGTGAAATAGCATAAAGCATGTACATCAGAATCCGGAATAACTTAGTTTAGGTGAAGGATTTAGTGTGTACTGCATGGTCAGGTGAGAGAACCACCTCTCGATATACCAATTTCCTGAAAGTAACAGTGTCTTGATCCATACTATATTACTATGTCGATCAGTTAAGGAAGCTAACTGGAGTTCAGTGTTTGTGTCAATGTTGAATGTGACCAGCTGAACATGGACTGATATAGATTAACTACAAATAAATTAGCATCGATCAGAGCTTTTCACCAACACAAACAGGAAAGATAGCATTGCCCAAGTGAGAATTCCAGGACCCATTTAGTGGTATTTATATCTGAACCGACAGTTCTTAGCACTGTATTCGGATTGGAGCTTAGTTTTAAGAGAAATTCCATCTATACCACAAGGATTTTACCAGTACCAAATAATACCACAAGATTCTTTCATCTCCACTCAATAACACAGTGCAACAATGTTTCTTTCAAAAATACCACAGATTTCAGACGTTACCCAATCTCATATAAACTGATTTGTCTCCGTTACCTGTGTTCGAAAAGAGTACCGAGGTACCCTGTGTGAACAAGATTGTGAAAAGAGTACTGAGGTACCTGTGTGAACAAGATTAGGAGTTCTCCAATCCCATCGTGGCCTGCAGCAGCTGCATGATGCAAAAGCTGCCTTTGGTGATTAGCTGGTGGATCTCGCCATCCAGGACCTTGCTCAGGCATGTGAACTGATGAAGCAGTCCGTGGGTGTCTCACAACTTGGCCTCCATGCCGCTCGGACACCACGGTGCCTGTCCTTCTCGAAGCAACGCCGCCGCTTTGTTTGCCCTGCAGGGGATGGGGCCGAATCGCCGGAGCCGGAGTGCCTGAGCTGTGGGGTCTCCTGCCCGGAAACAACGCCAAGGCGGCAAAGCAGAAAAGTGCCTCCACGCGGGCCGGACCAGCGGCGGTCTCCTTCCTCCGATGCAATGGCGGCGGAGCAGAGATTGCCAGCCCTAAGAGAACGGGAGATGTGAGGGACAATTTTGGTCAAGGCGTCGGCGGAGGCGGTGGGAAGCGGCGGGCGTGTAGGAGGCGGCGGCCTAGAGCGGCGGCGGCGATGCGGCCCGCTTCCCTCGGCAACGACGACGACGGCTCTGGCGGGAGGCGGCGGCCACAGGCGATCCGAGGTGGCGGCGGGGTAGGGGAGTCGTGAGCGCAGCCGCGCGAGCGGAGTGGCGGCGGTGGGCCCGCACGAGAGGCGCGGTGGCGGCGGCGGGCTGAAGCATGAGGGAATTTTTTTTTTCTTTTTCGCTGTGAACAATCGTATTTTTTAATCGCCGCTTTTCTCGAGGTGGGAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0300700.1 | 5 | 10722486 | A | T |
| Osa05LNT0300700.1 | 5 | 10720494 | G | A |
| Osa05LNT0300700.1 | 5 | 10720499 | A | G |
| Osa05LNT0300700.1 | 5 | 10721171 | C | T |
| Osa05LNT0300700.1 | 5 | 10722325 | C | A |
| Osa05LNT0300700.1 | 5 | 10721653 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0300700.1 | osa-miR1440b | Translation | 4.5 | 16.443 | 1 | 21 |
| Osa05LNT0300700.1 | osa-miR6247 | Cleavage | 4.5 | 17.334 | 1 | 21 |
| Osa05LNT0300700.1 | osa-miR166k-3p | Cleavage | 5.0 | 18.161 | 1 | 21 |
| Osa05LNT0300700.1 | osa-miR166l-3p | Cleavage | 5.0 | 18.161 | 1 | 21 |
| Osa05LNT0300700.1 | osa-miR1863a | Translation | 4.0 | 11.83 | 1 | 24 |
| Osa05LNT0300700.1 | osa-miR1320-5p | Cleavage | 5.0 | 11.864 | 1 | 21 |
| Osa05LNT0300700.1 | osa-miR2099-3p | Translation | 4.0 | 22.164 | 1 | 20 |
| Osa05LNT0300700.1 | osa-miR2118b | Translation | 5.0 | 20.011 | 1 | 22 |
| Osa05LNT0300700.1 | osa-miR2118n | Translation | 5.0 | 20.011 | 1 | 22 |
| Osa05LNT0300700.1 | osa-miR5507 | Cleavage | 4.0 | 18.033 | 1 | 21 |
| Osa05LNT0300700.1 | osa-miR5519 | Cleavage | 4.0 | 20.006 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0300700.1 | 5 | yl(t) | Morphological trait | Shoot/Seedling | nan | nan |
| Osa05LNT0300700.1 | 5 | qTHJ-5 | Morphological trait | Seed | RM289 | RM249 |
| Osa05LNT0300700.1 | 5 | gnp5.1 | Morphological trait | Panicle/flower | RM194 | RM249 |
| Osa05LNT0300700.1 | 5 | nt5.1 | Morphological trait | Culm/leaf | RM169 | RM249 |
| Osa05LNT0300700.1 | 5 | snp5.1 | Morphological trait | Panicle/flower | RM194 | RM249 |
| Osa05LNT0300700.1 | 5 | QKw5 | Morphological trait | Seed | RG182 | RG13 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)