© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0305400.1
CCAAGCATTCCTCGTGTAATCACGGTTTTGTACCAACTTACAGATGACACATGTGTATTACAAGGACGTATAAGCATTATTCACTTTTTCTATGGTAATTATACCGCAAAGAAAAAAAAAACCAAAGTGACCAAAGCAAACTAAAACGAAAAGTTCTTTACTAGTGCAGATATGAACACACCGGATTACAGAGCCACCTAGCTAGATCATTGCTCACTGCCGATCTCTTCTCAGGGGTGTGCAGCAAAGCTGTCCCAATCACCGGAAGTAGCCATAGAGCTCGAGGAAGCAGATGCAGAGATTCCAGGTGTTGGAGACGCCGGTCGCCGGGGCCGTCAGCATGACCCGGAAGAACCGAAACGGCAGCAACGCCGTCTGGCCGGTGATCGGCCACGACGCGAACTGGCCAGGCTGGCAGATGGTCTGGTCGTCTTCGTGGACATGCAGGCTAGTCCAGCTACGGCCGTCCATTGATCCCTGAAGAACCCACGACCTCATGAAGGTCGCGGAGCCATCCTGCCTCACCGTGTAGTAGTTGCACATAAGCTGGTGATCCGGTCCAATGTCTACCATCCACCAAGAACACATCTTGCCATCTTCAAGACGAGGCCCAGCAAAACAAGTCGCCTGGTAATTTTTTGAAACCAAAGCCTTTGGATCCGTGTACCTGGAATTTGGGCTGCTCGCTGTCACTGTAATATTCTTGGCTAAAACAGGGTTGATCCATTGGTGTTTACCAAATGATGTACCGGCATAGTAGATAACACCATTGTTATCACCATCCGAAATATACTGAAGCTCTTTATAGCTGGAGCGTCTATGATGAAATCTCTCACATGTATTTGTTGCCATCCGTAGTCCCGCATTAGAGAACTCAATGGCTTCTGCAACCAACTGTCTGAACGCTTCTATGTTTTTTGCTAGATTACTTTTCTCCATCAGGTGAAGGACAGATGGTTGCACTAAAGGGAACCGCACAAATGGTAGCAAAGTATTGATGGCAGTGAGCCTCCCTCCAAAGAGTTTCTCTGGTCTTGAAGTGCTTAAGAGCTCGTGCACAGAGGTCCAGTTAAAACAGTCACAAGCCTCCATGCACCATGTTAATATGGCATCCAGAACCCTCTCTTCTGATGTTACAGTCATATGCCCATGCTGAAGAATATCCTTAAATGTTGCCTCATCCAACAACACAAAGTCTGTGCAAGCAGTTGTGCAATAATCAAAGTGTTCTGCAAAATTCCTCTTGCACATTTCTTCAAGCAGTTTACAAGATGGAATTGACGAAACTGCTCGTAGAACTGAACATACTGTGTCCTTTGAGAGGAATTCCATAATTCTTTTACAGCATTCAAACTGAAGAGCCGTGATCCCAAACTGGTCTGACAATAGGAGCAGCTCAACCAACACTGGTGTGATTTCCTCGATATCCACCTTAAGTTCCCCACTGTACATAAATTGGATGAGGAGAAAGAATGCTTCGACGGGAACATCTTCGAAAAATACATTTGAAGCACTGCTTTCTTTCATTCCATTTGTGAACATCTTGTCAAATGTCATGCTCCACAAGCTAAGGATGAGTTTGTGAGCATGAGTAACAAGACCATGTCCATTTACATAGATATTTACATCACTGTGCTCACCATTTACAAGGAACTGTTCAATTTTCTGTGTATTTAATGGAGCTTTGAAAGGGAAATAATAAAATTGATGAGCTTGAGAACCACCACTTGATAACTGTATTTTTTTGCTAGACTCAGAAACTGCATCACTCATCTTCAAACAGCCAATAATTTCTTCACAATACATTACCAATGGTTTAACTTTAAATTGTGAACTCAACTCCAGCAGTGAAACCAGTTGCCATTCCGAAATCTGCGTAGAACCTGTGTAGATGTACTCAAGAAGGGAGTGCAGAACTGGGTAGGAGACAGATGGAAGCTCAATAGCTGGTCGACTCATCATCAGGTTAAAAGGGAAATCACCACAAGAACCCAAGACAACTTTGTGAGCTGGGACAACCTTTCTTTCGCTGCCAACCACAAATATAGAATCTGAGAAATCCCAGTTCTCTAGAAAGTTTGCAAGTGCCCTTTGGTCTAAGCCATCTTTTGATTCTTGTTTTCTTGTATGCCCTCCAGCACCATCCGGCTCAACATATGCACACTCAATTTGGCTCCAAAGGATGCTGTTTTGAGGAGCTGATGGCATAAGACTTATATTTCTGTATCCAACATGCTTGTCCCAGCTGGATAGTCCCACATACTGAACATTTCGGTTGGGATCAGGGTCAAGCCATTGGAACAGGATGTTGTTATTTGGATGTCTTCCTTGCCCGATGCTTATCAGTCCATCATAGATGCTGATCCAGTAGCTCTGAAAAGACGAGGAGCAACATAGGCCAATGCCAGCAACATCAACAACAGTCTTTCCATCTACTTCAATTTTCAATCTTTTGTTCCTATGGCTGCCCAAGATCACAATGTAGTGACGACTGTTATCCATTTTGTAGTGATAATGCTGGCTCCCAGGTTGTTCGCGGAACACCAGGGTAACATCATTGTGTGCAGATGCCTCAAAGGTGATGCACCCGCGACCAGTCTCCCTGAACCGAAACTCCTCATCCCAAGCACACTCGAAGGGGGCAACTGTTATAGATCTTTTTTTCTCCTCCACTTTCATCGTAAACAGATTTCAGGTTTACCACCAAACTTGGGCAATCAAGCGTCAATGAGTATAAATATCAGGATGCGGCGGAAGCAGCATGACGAACGACGGCGCCCTGCTCGCTCGCGCCTCGCAGGATGGATGGGGATCGGCGGCGGCGGCGGCGGCTGGCAGACT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0305400.1 | 5 | 16269497 | G | A |
| Osa05LNT0305400.1 | 5 | 16269722 | T | C |
| Osa05LNT0305400.1 | 5 | 16269946 | G | A |
| Osa05LNT0305400.1 | 5 | 16270657 | A | G |
| Osa05LNT0305400.1 | 5 | 16270884 | A | G |
| Osa05LNT0305400.1 | 5 | 16273157 | A | G |
| Osa05LNT0305400.1 | 5 | 16273306 | G | T |
| Osa05LNT0305400.1 | 5 | 16268791 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0305400.1 | osa-miR5528 | Translation | 3.5 | 8.952 | 1 | 21 |
| Osa05LNT0305400.1 | osa-miR160a-3p | Cleavage | 4.0 | 13.21 | 1 | 21 |
| Osa05LNT0305400.1 | osa-miR160b-3p | Cleavage | 4.0 | 13.21 | 1 | 21 |
| Osa05LNT0305400.1 | osa-miR160c-3p | Cleavage | 5.0 | 13.21 | 1 | 21 |
| Osa05LNT0305400.1 | osa-miR160d-3p | Cleavage | 4.5 | 13.21 | 1 | 21 |
| Osa05LNT0305400.1 | osa-miR395t | Cleavage | 4.5 | 19.138 | 1 | 21 |
| Osa05LNT0305400.1 | osa-miR395c | Cleavage | 4.5 | 19.138 | 1 | 21 |
| Osa05LNT0305400.1 | osa-miR395a | Cleavage | 4.5 | 19.138 | 1 | 21 |
| Osa05LNT0305400.1 | osa-miR395f | Cleavage | 4.0 | 19.138 | 1 | 21 |
| Osa05LNT0305400.1 | osa-miR159f | Cleavage | 4.5 | 18.606 | 1 | 21 |
| Osa05LNT0305400.1 | osa-miR319a-3p.2-3p | Cleavage | 4.5 | 18.695 | 1 | 20 |
| Osa05LNT0305400.1 | osa-miR319b | Cleavage | 4.5 | 18.695 | 1 | 20 |
| Osa05LNT0305400.1 | osa-miR418 | Cleavage | 4.5 | 16.749 | 1 | 21 |
| Osa05LNT0305400.1 | osa-miR444a-3p.2 | Translation | 4.0 | 18.865 | 1 | 21 |
| Osa05LNT0305400.1 | osa-miR444a-3p.2 | Cleavage | 4.0 | 10.527 | 1 | 21 |
| Osa05LNT0305400.1 | osa-miR444d.2 | Translation | 4.0 | 18.865 | 1 | 21 |
| Osa05LNT0305400.1 | osa-miR444d.2 | Cleavage | 4.0 | 10.527 | 1 | 21 |
| Osa05LNT0305400.1 | osa-miR444e | Translation | 4.0 | 18.865 | 1 | 21 |
| Osa05LNT0305400.1 | osa-miR444e | Cleavage | 4.0 | 10.527 | 1 | 21 |
| Osa05LNT0305400.1 | osa-miR444f | Translation | 4.5 | 18.865 | 1 | 21 |
| Osa05LNT0305400.1 | osa-miR444f | Cleavage | 4.5 | 10.527 | 1 | 21 |
| Osa05LNT0305400.1 | osa-miR1866-5p | Cleavage | 4.0 | 17.618 | 1 | 24 |
| Osa05LNT0305400.1 | osa-miR2096-3p | Translation | 2.5 | 19.631 | 1 | 21 |
| Osa05LNT0305400.1 | osa-miR2873a | Translation | 4.0 | 15.288 | 1 | 24 |
| Osa05LNT0305400.1 | osa-miR2928 | Cleavage | 5.0 | 22.154 | 1 | 20 |
| Osa05LNT0305400.1 | osa-miR171d-5p | Cleavage | 5.0 | 12.924 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0305400.1 | 5 | QKw5 | Morphological trait | Seed | RG182 | RG13 |
| Osa05LNT0305400.1 | 5 | qLTG-5 | Resistance or Tolerance | Cold tolerance | RM249 | RG13 |
| Osa05LNT0305400.1 | 5 | yl(t) | Morphological trait | Shoot/Seedling | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)