>Osa05LNT0308200.2

ACACCTCAGTCGAAGCTCGAAACCATCTGCATCCTCCTCGTCTCCACCCGGGCCTCCCCAGTCCCCTTCTCCTCCCGGCGAGGCGGCGGCCGTCGGCGAGGCCGCCTCCGCCTCCGACTTCAGGCAGTGGGAAGGAAAGAAGAGCTTGGAACGGAGGAGGCGGGAGCTGCCTCCGCTCCGACTCTCCGAGCCATGGGGACCTCAGCCCAGGGAGCCGGACATCCGGAAGCAAATCGATCGATGACGGTGAGCACTTAAAGAGCTTGAGAAGTTGGGTCGTTAAAAAGCTAGTGACCAGTCAGTCAGTGAAGGAAGAGGTGCTAAAACCTGGTGATCGTGTCTTGAAAGATAAATAGGGATCTCGGTATTTAAAGGGAAACAAACTTACTGTGAGACATTCCCCTGGAGCTTGGGAACATGTCTAAATTTAGCTACCTGTAAGTGATATTTCTCTTGTGTAGAAGATGTTTTTGGAACTCCAGTTGATGTGGAGCACTATACGAGGTTTGGAAACTTTTATCCATGCAGGCAAATTAATGGCATGAATTAGTGGGGCAACAATTCCAACTTATCAAACTTGAAATAGCTTTTTTGAACTGTATGGACTTATCATGCAAATGTTTGTTCTGTGCAATTTGTTGACCAACTTCTCTGAACAATTTTGTAAGTTAGGAAGTGATCCCAACTGTCGGTCTGCTCTAGCGAACCACTAGTACACAAAGATTACAATACATGTATAGGAATTACACAACACATGTATAGAAATTTCACAAGTTAAGAATATCTGGGCTGAGAAGACAGGACTGAAGTGAAGGGCTATCAACCGTAGGTTGCACATCTAGTGGCAGCAAAAAAGTGACTGAAATTTTGTAAAATTTCAGGTGATTGAAATCTAGATTCCCCTGTGTAGCATATATGATCCCTTACTATTAGGAATACTTTGACATATATGTACATATTGTATTGAATTGTCTCTTTCCTTGTATTCTCCTCTAATTGAGGATCATGTACATGTGCTTCCTATATCAATGCAT

Explanation	CPC Score
noncoding (weak)	-0.97701

Transcript ID	Chromosome	Locus	Ref	Alt
Osa05LNT0308200.2	5	18384036	A	T
Osa05LNT0308200.2	5	18384037	A	T
Osa05LNT0308200.2	5	18385230	A	G
Osa05LNT0308200.2	5	18385476	A	G
Osa05LNT0308200.2	5	18385602	T	A

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa05LNT0308200.2	osa-miR396f-3p	Cleavage	3.5	14.308	1	24

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa05LNT0308200.2	5	QKw5	Morphological trait	Seed	RG182	RG13
Osa05LNT0308200.2	5	qLTG-5	Resistance or Tolerance	Cold tolerance	RM249	RG13

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus