© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0308500.1
AAGCAGATTTGCGAATTCAAATAATAAGAAGGACCAAGTTCATAGCAAGATCCTAGATTTGGTTTTACTTCTTATAAAACACGCCATTCACGAATTCAGCACCATATGTGTAGTATTCATACGGCTAGTTAGCACACATATAGATGGCTTCATCGTCAACTAAATCCCAGCTATCATCCAAATCAATACTGTCATGGAAGGAAGCATCATCAATCTCTTCATCACCACTGAAAACTGAATTTGATTCTGCAGCAGATGACCAAGTACTCTTGAATGTTGCTGGTTTCTCTGAGCTGGCCAAGCTAGATGAAGGAAGCGGCAGCGACTCATCAGCATTAGCCCTTTGCTGGAACTGTGTAATGGTGTCTGAAGCAGATGACCAATTCTTGAAAGTTGCTGGTTTCTCTGAGCTGGCTAAGCTAGATGATTGCAGCATCTCATCAGCATCAGCCTTTTGTTGGAACTGCGCAATGCTGTCTGATGATTTCACTGAGCTAGATAAGATCAATGAAGGTAGTTGCAGTAACTCATCAACAGGTAAATGCACATCAAGTACTCCCAAAAGTTGAGCGATGTTATCTCCTGATTTGAGCGAACTGGATAAGCTTGATGAAGCTAGTTGCAACACCTCATCAACAGGAAGTAGCGGTTCATCAACTCTATATTGGGATTGTGCAGACATGACTGAGCTAGATAACCTTGGTAAAATCAGTTTCAGCTGCTCACACTCGTCAACAGGAAGCAGCGATTCATCAACAGAAATTTGTGGCTCATCAACTCTACAATGGGCTTGCGCAGTGCTATCTGTTGATTTGAATGAGCTGGACAATCTAGGTGAAGCTAGTTGCAATGAATCATCAACAGAATGCTGTGGGTCATCAACTCTGCACTGGAGCTGTGCAATGTTATCAGCTGAGTTGACTGAGGAGGACATGCTTGATAGCAGGGGTTCAGGAAGTTGCTTATCAACCCTGAGTTGAAGTTGTGAAATTTTATCGAAGATTCCCAGCATTTCCCCCTGCAATGCATCCACAATTTGGCCTCGGTCCATTAGTAACTCCCTCAGCTTTGCATTCTCCCGCACTTGCTGTTCCAGCATCTTGGATCTTTCCTTTGTAGCATCAAGTATGAGTTCTTGTTCATTCAACATTTTCTCAGCCAATGTTTCCCTTTCAACCTTCTTCTTCTCAGCTGCTACAGTCTCCACTTCAGCTTCAGCAAATCTGTTTTGAAGAGTATAGCGCATCTCGTCAATAATTAAGGCACAGTTGTTCCTTTCTTCAGAAATGTTAGACAACCGAGCTTGAAGCCCATGTGCTTCTGATGCTAGAATAGATTGCTCAGCGAAAACCTCCCCTGCAACTTTGTTGTTCTCTTCTGTTGAGAGCATTGTCATCTCTTTTAACTCCTCCACCTTCACAAAAATATCATTGCCAGCTTGAGTTGCTTCCAACACAGCTTGTTTTGTTTTTTCTTCTTTTAACTTTATGTCCTCTAGCATTTGGTTTATCGCTGTTACGTTTGACATCAAAGTAACCTTCTTGTCAATTTCATCAGCAATTGCATTGTCAAGCAACTCAAGTCTAACAGGGTAGCTTGACTGTATGTTCATAGCAGGTAATCCATCGTCATGGGTTACCAAATCATCATCAAAAGCTGAAGTTCCAGGTTTTGAATTCAGATCAATAGCAACCAAACAATCAGAATTTTCTTCCATAAGTCTATCCTCCTCCTCGTCATCTTCATCTTCCTCCTCATCATCTTCATCTTCCTCCTCCTCATCATCATCTTCATCTTCCTCCTCCTCTTCTTCCTCTTCTTCTTCCTCTTCCTCTTCCTCTTCCTCCTCCTCCTGCTCAGCTGTGTATTTGTTCGCTAAGTAAGACTGCACTGAATCTGCATCATTATCCACCGAAGCAGGCCCTTCGTTTGCATGTGCATCATTGTTGTCCGGGATACTTGGAAGGACATTATGGATAATATAATCCGCAGCACCATCTATATCATTCTTATATTCCATGCAAACTTCTACCAGTGTTAAGAAATTCAACTGCGGGAACACCTCGAGGAGGGCGTCCAGGAGATCATCCCCCGTGCTCACCTTCCCCTCCCCCTTGGCCGACGAAGACGAACCGGCGGTGCTGGACGAGGCGGCCGCGGAGGGCGGCTGCCTCCGGGAAGAAGACGACGACGACATCGATCGAGGAGCAGCAGCGGCGACCGGCGCGAGAAGGTCGAGACTCGAGAGGGTTTGGGAGGGTTTCGAAGGTCTTTTTTCTGGGGGGAACGAACGATCGATCGAACGAGTCGTACACCGTGCGCCGCGGGGGATTTTATCGGGGGCGATTTCGTTACGCCCGGGTTCGTTTCCAGCTCGCGCTTGGGAGCGCTCGCCGTGCCGGGTCCCGAGGGGACAGGTGACCTGGTTAAAGATAGGTGGAGGAGACGAATCGGCCGTTGGATCTGGTCAGGATTCGGGATCGGACGGCGGCTGGACAGGGTTTGGGTCTCTTCTCCGCCTGATGGAGCGGCGAGGATCGGGACTCTGTCACGTTTTTTTTTCTTTTCTTTTTTTGGCGGGGGACTCTTCTGCCAGCTTCTTGACTCTTTTACTACAATGGCATATCAGTATTACTGTACACACAACGTACTAGTAGTAATCTGCAATTTCCAGCTTTATTTCGTTTTTATTAAGACAAACACAACCAAAATTTGAACTGCAAAAGCAGAAACGACGATTCACACCGACAAAATTGCATACATAATACAGATTACAGAAACTATACGCTAAATACAAATTACAGTGCACAATTTACCTCTGAAGAAAAGCAATAGTCTTGGTCACGTCGATGCGGTCGGAAACGAATCCTGCACATAAGAATTCTTCGAACTGACGAATTTCACCTGGATTCCGTAGCCATCGATGACACGAAACAGCTCAACTCCCACGGCAATCCAAGGTAGCCTTACAACGCAGCAATGCCGGCGTGGAACCGGCGGCGGCGAGCGTCCGCCGCTGCGGCGGCCAGGGCGCTGAAGCTCTCGGTGACGTTGTCGCTGAGCACGGCGCCGTCCACGACGTCGATCGCCCGCTCGTACTCCCGCTCGTCGTCGCTGAACCGGTACGCCTGGGTCGTCGTCACCGACCCGTTGAGCACGTCGTGGTCCAGGAGCACCATCCACCCTTGCGCGGCCTGCGCGTCATCGAGCTTCTCCTTGCTCTCGAGGGCCTTCGTCTCGACCTCCGTCTCCACGCTGAGGCCGTGGGTGAGGCTCACCGTGACGACGGACGTGCCGTTCTCGCCGTCCTCGGTCTCCGCGAAGAGCGACAGCGGGTACTTGGCCTCCCTCTCCACCCTGCCGATCACCTTCCGCGTGTCGCCCGCCCGGATCAGCGTCTTCGTCTCCTGCTTCGCCTCCAGCGACACGGTCTTGTTCCGGCCGTCGCCGGTGAACTCCACCAGGCTGGTCGCCTTCAGCTCCGCCTCCACCTCCGTGGTGAAGTTGCCGAACGAGGACTTGACCCAGCCGCTGAAGGAGGACTTCCTCTTGGCCTTGATCTTGAACCTGCCCTCGAGCAGCCGCGTCGAGTAGTGGCGTGAGATTTTCAGGCGCGGCGTCTGGTACGCGCCGAGCGCGGCGTGCACGTCCGACGTGCTGGGGTCCAGCCAGAGGTGCAGGTTGGCGTCGACGAGCCACTCGGCGATGCCGTCGAACACGCTGAGGCCGATCTCGTGGGCGTTGCTGTCGACCAGGAGGCCGAGGAATGGGGTGAGCTCGACGTCGTAGGTGGGCAGGTCGAACGCGCCGAGCGCGGCCACCGGCTGCCAGAAGAGCGGGTTGATGCCGCCCGTGTAGATGACCGGGAACGGCACGAACGAGCCGACGAAGCGGTGGTCCACGCTGACGACGACCTCGCGGTACGCCGCGTTGCCCCTCCGCGTGGTGAGGTTGTTCTCCCTGATGTAGATGTCCGGCGGGTTGGAGTACCAGTACTCGTCGTTGGAGTGAGGGGACACGAACACCTCGAGCACCGCACGGTAGGTGCTCGACGGAATGGTTACGAGCCTGGAGTGCGAGTCCGACGCGTTCTGGATGCGGAACCAGAACCCGCCCTTGCCGTTGCCGGCGACATCCGAGATCGGGACGATGAGATCCGCCGGCTGGAAGTATGACTCCGGCAGCATAGGTTCCTTGGGATCGTTGCTTGCGACGCCAGCAGGGGAGGATGATGCCGCGTCGGAGAGGTACGGCGGAGTTCCATGGAACTCCAGCGAGACGTTGACGCTGTACACCCCGGTGTACTTGTCGTTGACGACGTTCTCGAGCATGACGGAGAGGACGCCGCCGGGCGGGGAGCGGAGGAGCGCGGAGTAGCGGGTGACATCCTTGCGGACGGTCCAGCGGACGCCCTCGGGGGTCGGCTCCGCGGTGGTGGTCCGGAGGAGCTCGGCGCCGTCGAGCCAGACGGCGGCGACGCGGTCGTACTGGTCGCCGGCGCAGGAGGCGGAGAAGGTGAGCACGACGAGGGACCAGGGCGCGGGGCACCCGGCGGGGGGCGCGTACGAGGCCTTGGCCGGCGCGGCGCCGTAGGTGTCGCCGAAGGAGTAGGAGAGGACCGGCACGGTGCAGGACGGCGCCGCCGGCGGGGGCGCGGGGAGCGGGAAGGTCGGGTCGAGGTACTCCTTGGCCGCCGCGCTGGCACCCGGGCCCTGCGGGGCGCGGAGGACGGCGTAGCGGTCAGGGACCTCGTCGGCGCAGGCGAGGAGCGGGAGGAGGAGGAGGAGATAGAGCGGCGGCGCCATCCTCTGCGGCCGCCGCGACGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0308500.1 | 5 | 19221824 | T | G |
| Osa05LNT0308500.1 | 5 | 19222075 | C | A |
| Osa05LNT0308500.1 | 5 | 19217537 | A | T |
| Osa05LNT0308500.1 | 5 | 19218530 | T | C |
| Osa05LNT0308500.1 | 5 | 19219345 | G | T |
| Osa05LNT0308500.1 | 5 | 19220365 | A | G |
| Osa05LNT0308500.1 | 5 | 19221821 | G | C |
| Osa05LNT0308500.1 | 5 | 19223718 | A | G |
| Osa05LNT0308500.1 | 5 | 19219353 | A | C |
| Osa05LNT0308500.1 | 5 | 19220958 | G | A |
| Osa05LNT0308500.1 | 5 | 19220345 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0308500.1 | osa-miR5822 | Cleavage | 4.0 | 23.53 | 1 | 21 |
| Osa05LNT0308500.1 | osa-miR5830 | Cleavage | 5.0 | 22.891 | 1 | 24 |
| Osa05LNT0308500.1 | osa-miR5830 | Cleavage | 5.0 | 24.013 | 1 | 24 |
| Osa05LNT0308500.1 | osa-miR6254 | Cleavage | 5.0 | 18.372 | 1 | 21 |
| Osa05LNT0308500.1 | osa-miR167a-3p | Translation | 5.0 | 22.852 | 1 | 22 |
| Osa05LNT0308500.1 | osa-miR167a-3p | Translation | 4.5 | 21.832 | 1 | 22 |
| Osa05LNT0308500.1 | osa-miR156l-5p | Cleavage | 5.0 | 14.848 | 1 | 21 |
| Osa05LNT0308500.1 | osa-miR1854-5p | Cleavage | 5.0 | 17.597 | 1 | 21 |
| Osa05LNT0308500.1 | osa-miR1858a | Translation | 4.0 | 0.086 | 1 | 21 |
| Osa05LNT0308500.1 | osa-miR1858a | Translation | 4.0 | 3.8 | 1 | 21 |
| Osa05LNT0308500.1 | osa-miR1858b | Translation | 4.0 | 0.086 | 1 | 21 |
| Osa05LNT0308500.1 | osa-miR1858b | Translation | 4.0 | 3.8 | 1 | 21 |
| Osa05LNT0308500.1 | osa-miR2095-3p | Cleavage | 5.0 | 12.987 | 1 | 20 |
| Osa05LNT0308500.1 | osa-miR5151 | Translation | 5.0 | 21.405 | 1 | 22 |
| Osa05LNT0308500.1 | osa-miR5494 | Cleavage | 4.5 | 18.259 | 1 | 21 |
| Osa05LNT0308500.1 | osa-miR5505 | Translation | 4.5 | 20.525 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0308500.1 | 5 | dcs5 | Physiological trait | Source activity | RM440 | RM430 |
| Osa05LNT0308500.1 | 5 | dcfs5 | Physiological trait | Source activity | RM440 | RM430 |
| Osa05LNT0308500.1 | 5 | nan | Morphological trait | Seed | RG13 | RG573 |
| Osa05LNT0308500.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)