© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0308700.1
GCTTCTTTATCTTTTGTAAATATGAAGCTGCTTTTTGGAAAAGTGAACAGAACAGCCTTTGAGAAGTCAGGACAGGAGTGGAAGTTCTACTGTTAATAAGCCATATATTTACAAAAACATAAGCCTACAGAGAGATACTACTGGTCAGCAAACGCACGACAGCTGATCTTCATTGTGCTACACGGATAAGTCCAGATGGTCAACCCGCCAGCCTCTGATGTAGAACGTTCCAACAATCAACCCAAAACCAGCAATTTTGCAGACTTCAGGTTCTGACTTCTGACCGCACCATTTACTAAGCGTGATGCAGCTAGCCAGCAATTTGGCAATCTGATCTTCAGAAAATTATACAGCTGGGTGAGATTGGATCCAAATTTTCGTTCGCATTGCATCAAGCCGTCAACCATTCCAGAAGTGGCCAAAGACAACACAATTACACAGCTCCTCGTAGGTCACGCTCTTCATAGTTGCTGTGCCATGAGTAACAAAATATCCTCCTTGGTTCTTCAGTTCCAGTTTATGCCACAGAAGATTGATATCAAACTATACTAATCTCATCCCAACCCAAGCACAATATTGGTCTGGGTTATAGAACTCTTCTTACTGCACCGTACTGCAAGTTGTTGACAATAATCAAGGTCACAGCATCTAGTCGGCTGTAAGCCTGTAAACTCTGAAGTTTTTTTGAAATGGCCCTCTTCTTCTTGTGGATGATACCATCATAACCAAATATGTGGCGTACATAACCTCAGGCACCATATCTCCTTAGAACTTTGCTTAGTGCTGGCATCACATTGTATGCTTGATAAGACCTTCTCAGCTCGATGATTGAGCCCACCTGAACAATCATAATAATCAACACCGACGTGAAACCTATAGAAAATCCCTCATTTATCTGCCTGAGATATCGGTCAAGTAATAAAGAGGAAGTCGCCAACAAGCTCAGCAATATACCCCCCCAGAAACGTGTAGATGTTTGTATTTTTGTAAGATACTCTACTGTTGCTCTTCCAGGCTTTATCTTCGGTACTCTAGCACTCATTTTATTCAGGTAGTCAGATATCTCTTTTGGCAAGTTTGCAATGTCAAAAATATTGAAGACGAAGACAAGAAATGCATATGTCAAATAATAAACCCATGGACCACCACCAACTGAAGTCTTTGGATTCAACGTTTCCTTCAAACTTTCCCAAAATTGCGTACCAAAAATGCTGGCCATAATGCTTGGAAAAGCTAATAAGTATGAGGTGGTAAGCAAAGGCTGCATCCCAGTTGGATTTATGTTAAAAGGGATATATGGCTCTACCTCTGTAACTGGGGAGCTCTCACTCCTTGCACCAGAAGCCAATTTAAATCCATAGTACTGAAGCTTTATCTTCCTACACCCTTCAGTCACCAGTACTGCTCCCATGGTAACCAAAATAAAAGTCCCAGCTATCCCCAAGATGTAGGGCCAACAGCTGTACCAATTTCCTGAAAATTGAGTTAACATCTTGTGGAGTGTGTCTGTATAACCAGTCAATATTCCCACACAGATAATCAAGGAAGAGCCATGTCCAAATCCAGATTCCGATATAGTGTCACAGATCCATGTCATTGTCATTGCACCAAGAACAAGGAAAAGGCTTGTTATCATTACATGCTTAACTCTGTAACTTGCAGCATATATAGAATATTGCAGTGAGTAGCATGACACTGTAAAAGCCGCCACAAGTGCAAAACCCAGCGACAGCCACCAAATATAGCCTTTGATCTTCTCATGTCCATCTAACCCTTCCTTTCGTAGTTTTTCAAGTGATGGAAGAACATGACAGAGAACCTGCATGACAATAGATGCTGAAATCTGATGACTGATTCCGAGCTGGAAAAATGACAGCTTCAATTCGGATGAAAAATCACCGAGGTCATCTGCAGGAAGGGGTGCAAAGCTGAGGTAGGAATCGGGGATGAGCCGTCGGTCGAACCCGGGAAGCGGGACGAAGTAGCCGACGCGGCTGAGCAGGATGAGCACGGCCGTGACGGCCAGCCGCCGGCGAATCTCGCTGCGGAAGAGCGCCTCCGCCGCGCTCTCCGCCACGGCCCCCAGCCGCGCCAGGTCCAGGAACCTGTTCCGGTACCCCGCCGCCTTCCTCGCCCTGCCCCCCACCTCGCCACCCTCGCCCGCAGGCCCTACGGGGGACGCCGCGGCGGCGGACGGCGCGGAAGCCCTGGCGGCATGGAGACGGCGGCGGCGAGGCGAGGGAGCCTGCCGCCTCGTCGTGCCCACGAGGAGGTGGCCGCCGTCGTGGTGCAGGCGAAGTGGTGGGTGCGTTGGGGCGAGGCGGAGCGGTGGGGAGGAGAGGGAGAGCGCGCGGCTGGGCGCGAGCAGGAGGGAGAGTGAGTGCGGCATGGCGGCGATGCCGCGGCGGTGGCCGAGCTGCCGCCGTCGCGCTCTGCCGGCCGATGGGATTGCAAAATCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0308700.1 | 5 | 19346334 | T | C |
| Osa05LNT0308700.1 | 5 | 19347567 | C | T |
| Osa05LNT0308700.1 | 5 | 19347882 | G | C |
| Osa05LNT0308700.1 | 5 | 19347891 | A | T |
| Osa05LNT0308700.1 | 5 | 19349082 | A | G |
| Osa05LNT0308700.1 | 5 | 19349410 | G | A |
| Osa05LNT0308700.1 | 5 | 19349841 | T | C |
| Osa05LNT0308700.1 | 5 | 19349858 | C | T |
| Osa05LNT0308700.1 | 5 | 19350226 | T | G |
| Osa05LNT0308700.1 | 5 | 19350972 | A | G |
| Osa05LNT0308700.1 | 5 | 19350985 | G | A |
| Osa05LNT0308700.1 | 5 | 19352557 | A | G |
| Osa05LNT0308700.1 | 5 | 19352865 | A | C |
| Osa05LNT0308700.1 | 5 | 19349047 | T | G |
| Osa05LNT0308700.1 | 5 | 19351370 | T | C |
| Osa05LNT0308700.1 | 5 | 19352010 | C | A |
| Osa05LNT0308700.1 | 5 | 19352358 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0308700.1 | osa-miR5526 | Cleavage | 4.5 | 22.276 | 1 | 21 |
| Osa05LNT0308700.1 | osa-miR5823 | Cleavage | 4.5 | 16.191 | 1 | 24 |
| Osa05LNT0308700.1 | osa-miR6245 | Cleavage | 4.0 | 15.082 | 1 | 21 |
| Osa05LNT0308700.1 | osa-miR166a-5p | Translation | 4.5 | 17.628 | 1 | 21 |
| Osa05LNT0308700.1 | osa-miR166e-5p | Translation | 4.5 | 17.628 | 1 | 21 |
| Osa05LNT0308700.1 | osa-miR160f-5p | Translation | 5.0 | 12.61 | 1 | 21 |
| Osa05LNT0308700.1 | osa-miR166l-5p | Translation | 5.0 | 18.815 | 1 | 21 |
| Osa05LNT0308700.1 | osa-miR166h-5p | Cleavage | 5.0 | 17.628 | 1 | 21 |
| Osa05LNT0308700.1 | osa-miR166h-5p | Translation | 5.0 | 14.338 | 1 | 21 |
| Osa05LNT0308700.1 | osa-miR435 | Translation | 4.0 | 21.152 | 1 | 20 |
| Osa05LNT0308700.1 | osa-miR1879 | Translation | 3.5 | 15.166 | 1 | 24 |
| Osa05LNT0308700.1 | osa-miR2871a-3p | Translation | 4.0 | 18.364 | 1 | 21 |
| Osa05LNT0308700.1 | osa-miR2871a-3p | Translation | 5.0 | 10.161 | 1 | 21 |
| Osa05LNT0308700.1 | osa-miR2871b | Translation | 4.0 | 18.364 | 1 | 21 |
| Osa05LNT0308700.1 | osa-miR2871b | Translation | 5.0 | 10.161 | 1 | 21 |
| Osa05LNT0308700.1 | osa-miR2923 | Cleavage | 4.5 | 12.883 | 1 | 22 |
| Osa05LNT0308700.1 | osa-miR1862f | Cleavage | 3.0 | 14.249 | 1 | 20 |
| Osa05LNT0308700.1 | osa-miR1862g | Cleavage | 3.0 | 14.249 | 1 | 20 |
| Osa05LNT0308700.1 | osa-miR5081 | Translation | 4.5 | 20.161 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0308700.1 | 5 | dcs5 | Physiological trait | Source activity | RM440 | RM430 |
| Osa05LNT0308700.1 | 5 | dcfs5 | Physiological trait | Source activity | RM440 | RM430 |
| Osa05LNT0308700.1 | 5 | nan | Morphological trait | Seed | RG13 | RG573 |
| Osa05LNT0308700.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0308700.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0308700.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0308700.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)