© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0311600.1
AACACAACTTTTTTTTAGATCAACAGGCACGATTTGTTCATGGCAGGGCAGAACTCTCTCTTAGAACAGCACAATATCCAGACACAATCCTTGGATGCCTAAAACCAACAAGGGAAAGAAAAGAAGCTTAAAACCATTTGGTGCAGCTAAAGGCCCCAACGTCAAGCTTGTTCAGTCAGTCTCACAGCATGGTACAGCAAAAGACAAAGCATCGGCCTACAGGAGAAGACAGAACAGGATTCACATCTAAAGTTCAATGCTTTCCTAAATAAAACTTGCTACTCGTCATCCGATTAGCTGGATAAGTTTCCCCACGATGAGTTTCTATATGCTCTGCATCTGGGAGAATGAGATCCTGATCGTGTTACCCTCCAGCGAGGTGGCATGTTTTGATACAAGGGCTTCGGTCGCCTCCTCTTCGCTCTCGAACTGGATGAGCGCCTGCCTCTTGCCGTTCACCTCAAACAGCTTTGTGTTTACAACAGAACCATGCTCTGAAACATGGTTAAGAATCGCATCCTCCGTGATCTCTTGTGGGAGGGCTGAAATGTGGATCATTTTGGTTGGAGCGCAGCAGTGACGGTAGTTCTTGATTACATTGCTGTTGAACCTGTTAAGACTTGAAGTCGTGTAGTCGTGCGCATCAGGAGCGCTTGTTATATTTGGGTACTTTGAGTAGTTAACCTCGAGCTTCTTTGCAAATAGCACTGCCCCCTTCAGATAATGCACAGCTAGCTCAGCCTGAAACCCATCAGCCATTTCAACAAGGGCGTGATCTGGTTTGTTGCGCAGTATTTTGATTCGGACTATGTTCCCATATAGAGAGAACAGATTGAAAAGCTTATCTTCATTTATTTTATCAGTGTTCAAATTACTGACTATTAGCGTGCAACGTTCGTTGGTACCAGTCACCCCGGGAGGTAAAGTTCCACCGAATGCAGCTGTGATCATTGCAGCTCTTCCCATCTGTGCATATGAAGCTCCTGGTTGTTGGAAGGCATAAAGACCACCTGGATCTGGATAGCCTTGCTGAGAGGCCCTTGGACGCTGTTCTGTAGGCAATGATGGGTTTGTGAAATCCCTAGAACGATCATTGTTGTAATGGACTTGCAGTTCGCTTAGATTTGAATATTGAATGTCTAGCTGGCAGCAACCGTCATATATGTTCCTTCCCTGGAATATTTTGTTTGCAAGAATGAAGACACCAGAAATGTACACAGGGAAATTAAATGAACAATAAAAATATTACATGCAAAGCACCAAATGCATCCATAGCTTCTTGGAGTGACTGATACTGGATAAGGGCTTGAAAACCAGCTGACTTCTGAAATGTGACAATCTTCTCCACATATCCATAAGCTTTGAAAACTTGATGTAGAACCTCCACAGTTATAGGATACATCATGTGGTGAATAGTAACTAAGAGGATTCGGTTGGGTTCTGACTCCTGATCTGAATTTCGTCCATGAGAGTTTTGGTCAGTGGTAAGTTCTTGGTGGGACGAAAATTGCATGTACACATTCCTTCCCCTTACGCTAGGTTGAACAGTACTGTAGTATTGCAGCGCACTCACTGAATTATGCAAGTCTTGCATTTGGAGAAGTGCCTGATTCTTGGCACGCAGCATGACGATCTTGGAAACATTGCCAAACGGCTGCAATAGCTGCAGCAGATCAGCCTCAGCGATTTCGTGCCCGACGTTCCGGATGTGGATCACCTTAGACGGCTCCGCCATCCTCCCCGCACCGCACCACACCACAGGTCTACGGGGTGCTCACCGGCGGCGGAAGCAGCAGGACGCCGGCACCGGCACCGCCGCTGCTCGCGGGGGGATGGAGATGAGATCGGCGCGGAGGCGGCGGGTGAAGTCGCGAGGAGACCTCTCCGTGGGGGTGGAGGAGGCCGAGGACGAGGAGAGGGGAGATCGGCTAGGGCCGGCGCAAGCGCAAGGGAGTGGAGTGAGTCAGGCCCATTACAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0311600.1 | 5 | 21415173 | T | G |
| Osa05LNT0311600.1 | 5 | 21415432 | T | C |
| Osa05LNT0311600.1 | 5 | 21415664 | A | G |
| Osa05LNT0311600.1 | 5 | 21416309 | C | A |
| Osa05LNT0311600.1 | 5 | 21418195 | C | T |
| Osa05LNT0311600.1 | 5 | 21419977 | T | C |
| Osa05LNT0311600.1 | 5 | 21420629 | A | G |
| Osa05LNT0311600.1 | 5 | 21416711 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0311600.1 | osa-miR812q | Cleavage | 4.0 | 21.482 | 1 | 24 |
| Osa05LNT0311600.1 | osa-miR818f | Cleavage | 5.0 | 20.442 | 1 | 21 |
| Osa05LNT0311600.1 | osa-miR160a-3p | Cleavage | 4.5 | 20.964 | 1 | 21 |
| Osa05LNT0311600.1 | osa-miR160b-3p | Cleavage | 4.5 | 20.964 | 1 | 21 |
| Osa05LNT0311600.1 | osa-miR160d-3p | Cleavage | 4.5 | 20.964 | 1 | 21 |
| Osa05LNT0311600.1 | osa-miR166a-5p | Cleavage | 4.0 | 17.433 | 1 | 21 |
| Osa05LNT0311600.1 | osa-miR166d-5p | Cleavage | 4.5 | 17.433 | 1 | 21 |
| Osa05LNT0311600.1 | osa-miR166e-5p | Cleavage | 4.0 | 17.433 | 1 | 21 |
| Osa05LNT0311600.1 | osa-miR1872 | Cleavage | 3.0 | 16.42 | 1 | 24 |
| Osa05LNT0311600.1 | osa-miR2872 | Cleavage | 5.0 | 17.493 | 1 | 21 |
| Osa05LNT0311600.1 | osa-miR5147 | Cleavage | 4.0 | 19.837 | 1 | 21 |
| Osa05LNT0311600.1 | osa-miR5489 | Translation | 4.5 | 20.885 | 1 | 21 |
| Osa05LNT0311600.1 | osa-miR5515 | Cleavage | 5.0 | 16.293 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0311600.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0311600.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0311600.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0311600.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0311600.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0311600.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0311600.1 | 5 | nan | Morphological trait | Seed | RG13 | RG573 |
| Osa05LNT0311600.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)