© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0311700.1
GTGTTTTAAGTATTGTTAGTTTGAATATGATTATTCTATGCATGAGAAATAGTTAAACTATACACAACATAGAGTACACATTAAAATATAAGAGAAAAATAAATAAAGTTGCTAGAGTTGGAAAATATTTTTAGGTCCTCAGGAAATTGGACCAGCCCCCATTCCCAATTCAGCCTGACCTTTTCATTTTAGGGTTATGGACTTTTAAAACGAGAGGCTGTTGTCTGAGTTGCTATTATGAAACACATCGATAGTCTCCATTCCATCTGTGCTTGTTTTCGTTGAAAAAAAATAGGTGGACAAAGAGAAGTATGAACTAGAAATTTCAATGTTTTTCAATGGACCGTATACATGGATAATCCGAAGAAAAAATATCTTACTTTTCAAACTGATCACAACGCTGTGATCAGAGTATGCTGTACAAACAGGGTAAAAAACACGGTAAAAACACAACAATGTGAAAAGGAACGCACAGACTTGATATATAGTTTCCTCAGGAGTCCTCTGCGAGATTATACATTTGACGAAAAATAAAAATCACATTAACGGTAGGCCAGTTCTAATCTCTCTAAACCATGGCCACATGATCATCGGCAAAAGCTTCTCAAATATAAACGAGATAAAGAGAGCATCACATATTACGAATTTTTACATAAATACCAGGGAGGACGATCCACAGATGGACTCATCTCAAGCAAACATGAAAATGGTAACAAGAATGCCCTCAGAGCTCATACAAATATCCATCGATGGTGCGGGAGACAGCCTCAAATTGTGTGAAGGATCTGTGATGCTAAACCACTTCCTGGGATGATGGTAAAGTACACAGCCTTATATTTGAGGGCACAGGTTGGTAGAGAGCGAGAGAGAGAGAGAGATGGGTACAGCACTTCCCAGAAAGCCAAACACCATCTCTGTATATCAAGTTTCATCATTGGGCTTCAAATCAAAGCATGGCACCTACGTAGTGCTAAACCTTGGTGAAAAACTTGTGCATGTGCAGGGAAACTTTATTGATGGCAAGTCTCTCTGATGCATTTCATTGATGGCATATATGGTCAGTGATTTGCCCGCTAAAACTTATGCAGTACCTGTATTCCAGACAAATCCTTTTGATGGCAATTCCCAACTGCTGCTGCTGCTGCTGTCACATGAGGGGGGAGATAGAGGGGGGAGGAGGAGCCGAGGAGGAGGAGGAAACCATGTGCCATCTCTGCATAGTAAGTTTTCATCATTGGGCAATGCATCATCATGCTACTACCAACCAAAGCAACATGGTAAGAAAAAAAATAATATGAACCAGATGGTAGTCAAGATCATGCCTATTGCAGGCTCTTGATTCATCACATTATACGGGAGATGATAAAAAATAATAAGGAATACAAAATGAGACAAGGATGAACCAGAACGTATGTAACAGTATGATCCTAATGCCCTCTGGCTTAAGACATAAATGCACCTCTGCATTTCAAGATGACACAAGAGACGGGCATCCAATTTGTAAATCAAAATTAGAACTCGACGAGGCATGTTAACACAAAAAACAGAAACAATGTAGTAGCATAAGTTGAGATATTTTTGCAATTGCTAGCAATAGACAAGTGGAGAGATGTGAACCGTTCTGAAGATCAATCACTCAGACATCTCCAACCATGATACATTACGTGCGTGCTGTTTACACGGCAATGGACCAATTTCGTGCATTACATCAGGCTATTAAGTAGACACAGAGAGTCAGAGAGGCAAGCAACAAAACCGAAAGATCCAAACGAGAAGACAGAAAGGTCTGTATTACCAATTGGCCCTCAGATTTCACAACTTCGTTTTCCATCTTAGGCTAATGCGGCGGCCCTCGACGCTGGCACTGGAGCATGTCTCAAGGGTACGGCAGAAGAGGACGATGATGATGATGCACGACGACGACGACGACCCGCCGCAGCGGTGGCAAGAGAGGAGGAGGAGGAGGAGGAAGAGGAGAAAAAAGAAAGAAAAAGAGCAGGTTTTATAGTATAGCAGAAGCAGCAGTAAACCATGTTCCTGCCGCGTGGGCGGGCCCACATGTCAGTGCCTCTCCGACCCCCCCAGCATGTTTCAGCGCCCAGATCATCGAGGAGCCAACGCCGTACTAGCCATTCTCGGGACCTCAACCCGCTTGCAGATGCAAAGGGCGAGCCTCAAATCCGAGCCGATCTATCTATCCATCCATCAACCAACCAACCAATCGATCGATTCGCGAGGGTCTAAATCGCAATCATCATCGGGCCAACGGCAAAATCCAAGCAAAACGAGAGAGATCAGAGGCATCAAGCCACGGCGAAATCGAAGCGAGCGGAAATGCAAAGACGAGACGGTAGGGGAAGCGGATACGAGTAAACCTCCCGCCGAAGCGGGGCCGGAGGCCGGAACCCCGGTTGATCGGATCGGCGAGCTCCCCGTGGCCGGCGGGGGCTCCGGAGGATCGGAGAGCACGAGGGATTGCGGCCTCTCCGCCTCCGCGAGACAACCCGAAACCCTAGTTTTGCCCGTGCTCTCGCGTTCTCTCCCATCTCTCTTCCCTCTTCCCGGTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0311700.1 | 5 | 21451315 | A | C |
| Osa05LNT0311700.1 | 5 | 21451340 | T | A |
| Osa05LNT0311700.1 | 5 | 21451348 | G | A |
| Osa05LNT0311700.1 | 5 | 21452163 | A | T |
| Osa05LNT0311700.1 | 5 | 21452290 | A | C |
| Osa05LNT0311700.1 | 5 | 21453418 | A | C |
| Osa05LNT0311700.1 | 5 | 21454102 | A | C |
| Osa05LNT0311700.1 | 5 | 21454464 | G | T |
| Osa05LNT0311700.1 | 5 | 21454598 | T | A |
| Osa05LNT0311700.1 | 5 | 21454735 | A | G |
| Osa05LNT0311700.1 | 5 | 21456849 | C | T |
| Osa05LNT0311700.1 | 5 | 21457097 | T | C |
| Osa05LNT0311700.1 | 5 | 21455291 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0311700.1 | osa-miR5831 | Translation | 4.5 | 12.549 | 1 | 24 |
| Osa05LNT0311700.1 | osa-miR156c-3p | Cleavage | 4.0 | 18.945 | 1 | 22 |
| Osa05LNT0311700.1 | osa-miR156g-3p | Cleavage | 4.0 | 18.945 | 1 | 22 |
| Osa05LNT0311700.1 | osa-miR166c-5p | Translation | 4.0 | 21.264 | 1 | 20 |
| Osa05LNT0311700.1 | osa-miR166d-5p | Translation | 5.0 | 14.713 | 1 | 21 |
| Osa05LNT0311700.1 | osa-miR166l-5p | Cleavage | 4.5 | 20.537 | 1 | 21 |
| Osa05LNT0311700.1 | osa-miR166g-5p | Cleavage | 4.5 | 20.22 | 1 | 21 |
| Osa05LNT0311700.1 | osa-miR529a | Cleavage | 4.0 | 18.332 | 1 | 20 |
| Osa05LNT0311700.1 | osa-miR5500 | Cleavage | 4.5 | 16.916 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0311700.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0311700.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0311700.1 | 5 | nan | Morphological trait | Seed | RG13 | RG573 |
| Osa05LNT0311700.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0311700.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0311700.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0311700.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0311700.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)