© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0313700.1
GGGGCTCACGTATTAGAAATATATTTTAGCTACAAATAGTTGGTGAAAATGGTATGTGTGAAGTGTGTTGTACAAACAAATGTACCATACATATTCACTCTCAAAATTTTGGTTTACACTTTACATGTATCTGGGATCTGGGTTACCAGAAGTTCATACATTTTCTGTGTTTCTGTGAGACCACAGGCCAGCGGCAAAGCTTTCTGCAGGCTTCTCGTTTTGGATGTGTTGTCCAGTATATGCCTCACCGTTGCATTGAGCATTGCAGTTGTTGCATCAGGTGCAAACACCCGGGAACAAGTTGAGCACTCAGTAGTCAGCACTCTCCTATTTGCTCCAACTCCAAAGCTCCGGAAGCATAATGCCCTTCATCTGCTGCTCCATTTCATTGAGCTCCATAACTGGCACGATGTGTACTGGAGACATTTGCAGTACATCACAGGCTCACAGATCGGCACAAACATACTGGACTTATCTATCATGGTTACAATTTTTGTCGCTATGTCCGCGCCAAAAAGTCATTAACTGCAAGTGAGGCATCACCATGTGCGACGGCATTCTCTGGCTCTGGCATGTAAAGTGTAGTAGTAGAAGCCTTCGTGTCTAATTGCAAGTCTCTGCTGTTGTCTATTGAAAGAATAGCACCATGAGCTTTTAACCACATTTCACACTCTTCTGATGCTTCACTATCAATTCTTGAGAATCCCAAAATTTGTGCAACATATCCCACTGGTATAGTCGGGCGATATGATTTAGACATGCATTTTACAGCCTCAAAACGCATTCGCTCCACATATAGATCCATGAGGCAAGAATTCAAGTTCGGTGCCTGCTTGTATAGTTTGAAAAATAGGACATAGTTTCCAGATGAAACAGCAGAATGAACTGCAAGGGCATGCTTGACAGCTTCATCTTGTTTGGCTTGTTTCGATAACCTTGCCAATGATGACAGCAAGTCTCGTTTATTATTAGAGTGCAACATGACACAGAGTAAATTGTACGCAGAGAATTCAAAGTAACAGCCCTTGATTCCCTCTGCATATAGCCTCTTCAGTTGTGACTGGCACTGGTTATATTCAGGTAGGTCACCTGCCTGCATTGCTAAACGTGCATGAGTTTCATAAACCTTGACAGTAAGTTCATTCTGGATTCTCTGAACTGTGAGATCTTGGCGAATAGACTTCAGTTGATCACATTTATAAAGATAATTCTTTTGAGATGTTTCAACCATGGAAAGGGCCTTCTCCAAGACATGCTCCGGTCTTACTGTGGCAGGATCAGGTGCTGATGTAAGCCGGAGATATCGTTTCTCAATTTCTTGGCATGTCCCCTTTACTGTCAATGCATCCCAATCCATATCCTCCACAGCCAAGGTAGTGCCATCTTCACAGCTTCTGGCAAGAAGAGCTGAAACAGCTCTTCGTGCATGTATATTAGCCATTACATCTTTACTTGCTGCAGAATTCCTCGATTTAGATGATGAATTCTGGTTCTTCTCAAAACGCTTTGACCTATGCTCCCTGCGCTTCTTCTCCTCAGGTGAATTTGCTAGTGCGGTTGCACTGGCATAATATTTGGTTAGATCCTGCTCCTTATCACTATCACTTGAAGCATTTCCATTTTGCATTTGATCTGAGTAACTGCTGATCTTTTGCTTCTTGGCAGGCCGCTGACTGACTTTGTTTGCAGTCGCATGATGAGACTGGAAAAATTTTCTGGAATCCCAGTTATTACTCATTCTGTTTTTGGCTTCCAAATTATTGTGGGTGGTACCATTCACCAACCCTTTTACCGGTTCCACCTTATCTGTAACCTTTTCCTCCACAACAGGCTCCCACCTACTTTTTTGGCGTCTCCTATTGGTAGATGTCGACAAGGAGGGACTTGAATTGTTTGCACTTGTTTCTGGAATGGTTGCAACATTTTGTACCAAAGGAAGCAGTGGCTCAGTGTCCCAATTCTTAGTAAGAAGGGTTCCATCAGCAATGGCGCTGTTTTTTATCTCTTCTATCATACTCTGGCAAGCAGCCTTCTGGGCCTCATCCTTGCAACAGTTGAGATTCCTCGTAGCATAATTATGTAATGAAAAAGGGAGTGATCTCTAAACATGAGAATAGAAAAGTAGGTGGTGAATATGCAAGTACCAATATCTTCCTTGATTAAGTATAAGCATAATACGTGCTAACTTTTTGCGCTGGTTTTCCAAGGAATAAGCCAATGCATTCTCATAGACATCGAACGAATTTAAATATCATGAGTTTGAACTAACAAACTAATATATAATTTAATGAATCATTTTATATGCCAATAGCTCCCCAAATAGTCATTTTCCATATGAGCAAAAAAAATAGCCTTAGAAAGTTAGAACATCATGTGCCAGAAATGAAGAAAAGAAGAGCAGAAAATTACAGCATCATTCTTCACCATGGAAACACTAACATAAGCAGGCTTCTTTGACAAATCAGCACCTAAAATTTTCTTCTCGCTCTTTGGTATTACCATAGAAAAACCTGGAGCAATTCGAGGAACCTGCATTTTGTTTTCACTTGAATTTTCGGTTGCAATAAAAACCTGCCAATTTGGGTGTAAATTTTCAGATACATGGTCGACTGAGTAAATATTTGAGTTTGGACCGTTTGAACCTACAGTATTTTGTTGATCGCCATGATTGCTTTGCTGAACGGGGTTCAAATTCACAGTGCTCTGTGGGCAGGCTGGTGTCTGGCTGGCATAATGGTTTTGAGACCTTGGGTTACCTGCTACCTGGCCAGCATACTGGTTTTCCAACACCGGAGCGTGCGCCTGGTTGATATATTGATCTTGAGGCCCTGGACCACCTGAAGCCTGAATAGGAGGCGCAATAGAAGAACTTGAATTACTTTTCCATGATGTAGTTCCTGGAGGAGGTGGCTGGATACTGGGATAGGAGTAGCTAGAAGTAGTGTTAACAATTGAGTTACTGTTCCCGACTGGATCACCAGCAGGATTTGGCACGGTGTGATTGTAATAGTATGGCCATTGGTTGTACTGCTGTTGGTATGAGAAAGAATTGGTAGGCACTGAAATGGAATGCTGTACTGTGTTGGTATTGGATGACGGGTAGTTCTGATATGACTGAGCATAATTATTTTCAAAGCTTCCACCATTCCAGGTGCTGTTCTGATAATAGCTATTGCTAGTTCCATATCCTGGAGCAGTCTGAATGTTGATTTGTTCCTCCTTGCTGGACAGAAGAACCATTTGTAGTTTGTGGGTAACTATAATAATAGTTTGCATATTCTGCAGCAGTGTACCCATGTTGAAGTGAACTTGAGTAAGGCATGTGAGAATGAGTCGCATTTTCTGTGCCCATAGTTGGCTGAGCATTATGAGGTGCACTGCTTGCCACACTCTGATTGTCTCCCGAAACCGAAACATCCCTTTGTGGATCATAGTAAACTGTATCTTGGCTTTGATTGTTCACTGGATAGCTCCACGGGACTGTAGCTGCCCCAGTTGAAGAGGACCATGAATGATGCCCTAAAGCTAAAGGTGGATAAGTAGATGGATTTGTCTGCCCCACAATGCTGACCTCGGCAGGAGCGGCATCGGATCCAGCAGCCACCACCCCGGCGCCGTGGCTCGCCATCATTCCTCCCCCTCCCGGAGCTCCAACCCTAGCGAACCGGTCAACCGCCCGCCGCCACGCCAACGCAACGCAACGCACAACCGAACCGAGCTAGCGACCTCGATTCGTCGAGAGCGAGGCGAGAAGCCGATCGATCGGGGGGAGAGCAGCCGCACGCGAACGAATCGAAACCCTTAGGCAAAGGCGCGGTGGATTCAGGGAGGATTGGAATCGCGCGTGAGGTTTTTTTTTTTGTGTGTGTGTGTGTGGGAAGATGCGGGAAGCGAGAGGAGAGGCGGAGATGTTGCCAGCTACGGAAAGGAGGACGAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0313700.1 | 5 | 22728338 | G | A |
| Osa05LNT0313700.1 | 5 | 22725637 | T | C |
| Osa05LNT0313700.1 | 5 | 22725683 | G | C |
| Osa05LNT0313700.1 | 5 | 22725849 | G | A |
| Osa05LNT0313700.1 | 5 | 22728055 | A | G |
| Osa05LNT0313700.1 | 5 | 22728117 | C | T |
| Osa05LNT0313700.1 | 5 | 22728919 | G | A |
| Osa05LNT0313700.1 | 5 | 22729683 | T | C |
| Osa05LNT0313700.1 | 5 | 22730023 | A | T |
| Osa05LNT0313700.1 | 5 | 22730382 | C | T |
| Osa05LNT0313700.1 | 5 | 22731623 | A | C |
| Osa05LNT0313700.1 | 5 | 22731805 | T | C |
| Osa05LNT0313700.1 | 5 | 22731974 | G | C |
| Osa05LNT0313700.1 | 5 | 22733220 | T | C |
| Osa05LNT0313700.1 | 5 | 22733845 | A | C |
| Osa05LNT0313700.1 | 5 | 22732275 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0313700.1 | osa-miR5528 | Cleavage | 4.0 | 16.966 | 1 | 21 |
| Osa05LNT0313700.1 | osa-miR5543 | Cleavage | 4.0 | 18.062 | 1 | 21 |
| Osa05LNT0313700.1 | osa-miR5793 | Cleavage | 5.0 | 18.554 | 1 | 21 |
| Osa05LNT0313700.1 | osa-miR5803 | Cleavage | 5.0 | 20.752 | 1 | 24 |
| Osa05LNT0313700.1 | osa-miR5512b | Translation | 4.5 | 21.843 | 1 | 21 |
| Osa05LNT0313700.1 | osa-miR1437b-3p | Cleavage | 4.0 | 20.786 | 1 | 24 |
| Osa05LNT0313700.1 | osa-miR167a-5p | Translation | 4.5 | 23.343 | 1 | 21 |
| Osa05LNT0313700.1 | osa-miR167b | Translation | 4.5 | 23.343 | 1 | 21 |
| Osa05LNT0313700.1 | osa-miR167c-5p | Translation | 4.5 | 23.343 | 1 | 21 |
| Osa05LNT0313700.1 | osa-miR156k | Cleavage | 4.5 | 15.48 | 1 | 21 |
| Osa05LNT0313700.1 | osa-miR159a.2 | Translation | 4.0 | 24.678 | 1 | 21 |
| Osa05LNT0313700.1 | osa-miR166k-5p | Cleavage | 5.0 | 12.961 | 1 | 21 |
| Osa05LNT0313700.1 | osa-miR167d-5p | Translation | 4.5 | 23.343 | 1 | 21 |
| Osa05LNT0313700.1 | osa-miR167e-5p | Translation | 4.5 | 23.343 | 1 | 21 |
| Osa05LNT0313700.1 | osa-miR167f | Translation | 4.5 | 23.343 | 1 | 21 |
| Osa05LNT0313700.1 | osa-miR167g | Translation | 4.5 | 23.343 | 1 | 21 |
| Osa05LNT0313700.1 | osa-miR167h-5p | Translation | 4.5 | 23.343 | 1 | 21 |
| Osa05LNT0313700.1 | osa-miR167h-3p | Cleavage | 4.0 | 19.243 | 1 | 21 |
| Osa05LNT0313700.1 | osa-miR167i-5p | Translation | 4.5 | 23.343 | 1 | 21 |
| Osa05LNT0313700.1 | osa-miR167j | Translation | 4.5 | 23.343 | 1 | 21 |
| Osa05LNT0313700.1 | osa-miR528-5p | Cleavage | 5.0 | 14.295 | 1 | 21 |
| Osa05LNT0313700.1 | osa-miR529b | Translation | 3.0 | 17.269 | 1 | 21 |
| Osa05LNT0313700.1 | osa-miR1860-3p | Cleavage | 3.5 | 13.974 | 1 | 22 |
| Osa05LNT0313700.1 | osa-miR1865-3p | Translation | 4.5 | 21.287 | 1 | 24 |
| Osa05LNT0313700.1 | osa-miR2874 | Cleavage | 5.0 | 23.37 | 1 | 24 |
| Osa05LNT0313700.1 | osa-miR5157a-3p | Cleavage | 5.0 | 16.964 | 1 | 24 |
| Osa05LNT0313700.1 | osa-miR5157b-3p | Cleavage | 5.0 | 16.964 | 1 | 24 |
| Osa05LNT0313700.1 | osa-miR5486 | Cleavage | 5.0 | 16.932 | 1 | 21 |
| Osa05LNT0313700.1 | osa-miR5512a | Translation | 4.5 | 21.843 | 1 | 21 |
| Osa05LNT0313700.1 | osa-miR2275c | Translation | 4.5 | 15.823 | 1 | 23 |
| Osa05LNT0313700.1 | osa-miR5523 | Cleavage | 3.5 | 17.505 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0313700.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0313700.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0313700.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0313700.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0313700.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0313700.1 | 5 | nan | Resistance or Tolerance | Drought tolerance | C43 | RZ70 |
| Osa05LNT0313700.1 | 5 | nan | Resistance or Tolerance | Drought tolerance | C43 | RZ70 |
| Osa05LNT0313700.1 | 5 | APAGE1 | Physiological trait | Eating quality | nan | nan |
| Osa05LNT0313700.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0313700.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)