© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0318500.1
GCAGAACTAACAAGATCTGAATGTTGATTTATACATGATTTGATACTTGGTACAGTATCTGCTGTTCATGTCATCATGTGCCATCCCTTTTATTTTGTTGGTACCACATTTCTAATCCTGCACTGCATATACCTAAGTGAATAGTATGCACTGTAGAATTCCGTCATTTTTGTGGAATCACAGCGGAAGAGAAGGAAATGTTCCTTCACCGGAATTGGGCGACAATGCCACAGAAACCTATACAAATCATACCGAATGGGAATAATCTATGCTCCAACTTCACTGGCCGCATGTGAAATCTGGATCCTTCACTAACTTGATGGTGAGCTCAGGGTTTGGACTATGCAGTTCAAAGATCACAATGACATTATCTCCAGGTTTGAGGATCGGCGCAGGAACATACAGAGCGCATTGTGGTCCAATGGCCGGCCAGAACCTTCCAATGTTGAAGTTGTTCACAAAAGCGACTCCTTTATTCCAACCTCGAAATGATATGAATGTGTCCTTTTTCTCAGATTCAGAGTCAATATGAAAATGGCCTTCATAGAATGCCGGTTCCTCTGAAATCCCTTCATTTAGATAGAGCGATACATCCTGCAACTTATTTTCTGAATCACCATAAATGGATACTTTGCTAGCTTCAGCATCAGTCATCTGCATGATTAGTTGAAGTTTTGAAAGGTTGCCCACCGCATTAAGTGAAACCGGATGCATTTTCCAGTGACGGAGAATAATGCCATCTATTTCAACAGAAGATAGTATGCCCTTCTGGTCAAAAATATATGGTCCATAATTTACTCGACCCATGTTTTCTACCAGGATATATAAGCTGACATTAGATGAGCAGCTTAAGCTTGGTATTTGTAGTGTTTTACTCGACCATCTTTCAACTATGCCAACATATCTCGGTTTTCTGACATCACCGTGTGAGCAGGACACAAACACTTGAGCTCTGTCATGTACCTTTGGAATTGATAGGATGCTGGATGAATGTTTTTCTTGATATTCTGATGTGTACAGTAGAAAACCAAACATCTGGCCCATCAGTTCCATGGATAGAGGCTGCTCTGAAAAAGCCACTTTCAGAGCATCACTGATGTTATGAATGACATCAAACAAAGAAGCGACCTTCTGTACTTCTACAAGCCCATAACTAGCTCTTTCAATTTTGGAAGGAAGTTGGAGAAGAGGAATGCCAGTGCATTCATGTATAACTCTTCTTAGTGCTTTGTATTTTGCATTATGCACGTCCCCATACTCCCTAATTGGTGCATCATAGTCATATGAAGTGAGGTCTGCCTTGTAGTCAGATTCATTTTGACCAGTATTTGCACCATTGTAAAACCCAAAATTAGTCCCACCATGAGCCATATAAAGTACAGCAGAACCGTTGCGGCACAAAATTCTTTTAAGAGCTTTAGCTGTACTGCTAGCATCAGTTGTTGCAATTCTTTCCCCCCAGTGTGTTAGCCATCCAGTGTAAAATTCTGAGCTTAAAGGAGCTGATTTTCCTGGCAAGTTGTATTCCTTCTGTAGTTGAAATATTGGCCATGGATTGGAACCAGTATCAAAATCAACAGCAGCGAAAACATCATCCTGAAGAATTGTTCCATTCTTTAGATTTCCAATGGCACCACCATCAGTTGTATACCTGAAAGATTATTTAGGGGAACTGGAGAATTCATAATCACAACATTGAATTTGAATATCACTGTTGACATAAAAAGAAGTGTATTGATGTTGATATCTGCACGTAAGCTTCGCTCTGAACCATCATTTAAATTAAAAGAACAGAAAATTAACTTTAATCGCATGACATCATATGGATGATTCTGTCAACAATTTAACAGTGATACTTGGATGAATATTTTCAATATTTCATAATGGCACTGCGCCAATAAGGCATGTCATAGATGCAGTTAAACTTAGTCATGCATGCAACCTTCACATAACAATACCAATGCCTGTATGGCAATATCGTTGTTGTTGTACCAAACCTTCTACTGTTTCCTACCCTAAGTATGCAATTTGTGGTGATAAACGGCAATGACTACATATAGAATCTGTAAAGCCAGTTATAAAACAGGCATAGCAGCCAATACTAAAATAAAATTGCACATATTTGCATTGTGAAAATTATAGTTGAGAAACTGTATACAGCATAATGTCATTCCCAAGATATCTTCTGGCAACTTCAACAAGGTAATGAAGATAATTCTTGTCATCTCCAAATGAACCAAATTCATTTTCAATCTGCACCATGATGATAGGACCTCCATTGCTGTATAATAGTGGTGCGATTTTTGGGAGTAGTACTCCCCACCATCTGTCCACCAAGGAAAGATAGGTTGAATCTGAAGAACGCAGTTCGATGGTTGGTTCTATGGTCAGTAACCAAGGTGGAAATCCCCCCAAGTCCCATTCTGCATTAACAGATTACAGAAATCATAGACCCTAAGTGCATAAAGCTCAAGCAAAGCACATGTACTATCACAACCCAATCAAATCTTAACTTTCAAACCACATTGAACCTGCACTAACATGACATTTATAAGCCAATAGAAAGTAGCATAAGTGAAAAAACAGTATCTGTTCTTCAACAACTTTAGGAATGCTGAGTGTGCTGTGGCAACTGAGCGACATGAGAATAGATCATACTGAAGCTTTTCCCTGATTTTCCCTCCACAAATATATGGACCTACACGAAGCATGACCAGCATATCTAATTCATGAGCAAGTCTTAAATATGATTCAATATCTGTGAAACCCTTGAATTCCCAGCTCAGCGGTTTTGGCTCATGCAGATTCCAAGGAACATATGTCTGAATTGTGTTCAAGCCCAGCGCCTTTGCCCTTAAAAGGCGATCTTTCCAGTACTCAGGGACAATGCGGAAGTAGTGAACGTCGCCGCCGACGATCTGGAACGGGGCGCCATCCTTCCAGAAGGTGTCGTTCTCGACCCAGAACCTTCTCGAAGCCTCCCCGCTGGCCGCGGCGGAGCACAGGGCCAGCGCGAGGGGGAGGAGGAGGAGAAGAAGGTTCTGGAAGCTTCTGGACGGCCCCATTCCTCGACTCCGGTGGCTCACGCGTTCACGCCCACCTCGCTCCACTGACTTCACCTGCAGCTGCTGGATTCTTCTCCCCGCGAAGCGTGCCTTGCGAGCTACGCCCAAATTCTTTCAGCTCTCAGGCTGATGATGATGAAGACAGCGTGAGATGCCGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0318500.1 | 5 | 26796782 | C | A |
| Osa05LNT0318500.1 | 5 | 26795162 | T | A |
| Osa05LNT0318500.1 | 5 | 26795584 | C | T |
| Osa05LNT0318500.1 | 5 | 26798380 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0318500.1 | osa-miR5797 | Cleavage | 5.0 | 14.708 | 1 | 21 |
| Osa05LNT0318500.1 | osa-miR5143b | Cleavage | 4.5 | 13.139 | 1 | 24 |
| Osa05LNT0318500.1 | osa-miR5143b | Cleavage | 5.0 | 14.982 | 1 | 24 |
| Osa05LNT0318500.1 | osa-miR319a-5p | Translation | 4.5 | 17.658 | 1 | 21 |
| Osa05LNT0318500.1 | osa-miR171d-5p | Cleavage | 5.0 | 20.648 | 1 | 21 |
| Osa05LNT0318500.1 | osa-miR171e-5p | Cleavage | 5.0 | 20.648 | 1 | 21 |
| Osa05LNT0318500.1 | osa-miR171f-5p | Cleavage | 4.5 | 12.493 | 1 | 21 |
| Osa05LNT0318500.1 | osa-miR1857-5p | Cleavage | 4.5 | 21.075 | 1 | 21 |
| Osa05LNT0318500.1 | osa-miR1857-5p | Cleavage | 4.0 | 12.899 | 1 | 21 |
| Osa05LNT0318500.1 | osa-miR1862a | Cleavage | 5.0 | 12.298 | 1 | 24 |
| Osa05LNT0318500.1 | osa-miR1862b | Cleavage | 5.0 | 12.298 | 1 | 24 |
| Osa05LNT0318500.1 | osa-miR1862c | Cleavage | 5.0 | 12.298 | 1 | 24 |
| Osa05LNT0318500.1 | osa-miR1866-5p | Cleavage | 4.0 | 15.091 | 1 | 24 |
| Osa05LNT0318500.1 | osa-miR2871a-5p | Translation | 4.5 | 21.465 | 1 | 24 |
| Osa05LNT0318500.1 | osa-miR2874 | Cleavage | 5.0 | 16.923 | 1 | 24 |
| Osa05LNT0318500.1 | osa-miR1862f | Cleavage | 3.5 | 12.298 | 1 | 20 |
| Osa05LNT0318500.1 | osa-miR1862g | Cleavage | 3.5 | 12.298 | 1 | 20 |
| Osa05LNT0318500.1 | osa-miR5071 | Translation | 4.5 | 18.806 | 1 | 21 |
| Osa05LNT0318500.1 | osa-miR5143a | Cleavage | 4.5 | 13.139 | 1 | 24 |
| Osa05LNT0318500.1 | osa-miR5143a | Cleavage | 5.0 | 14.982 | 1 | 24 |
| Osa05LNT0318500.1 | osa-miR5338 | Cleavage | 4.5 | 19.778 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0318500.1 | 5 | qGT5-1 | Physiological trait | Eating quality | RM538 | RM480 |
| Osa05LNT0318500.1 | 5 | qRGR-5 | Physiological trait | Germination/dormancy | RM421 | RM480 |
| Osa05LNT0318500.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0318500.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0318500.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Osa05LNT0318500.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0318500.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0318500.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0318500.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)