© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0320200.1
CAATTATTCCAATTGACATTACAGACACAATTCCAATTTGTCATACTTACACAACACAAATTTGTCAAGCTCACAAGATTCTACTATACACCATCCAGAATTTCTACCAAAAAATTTGGCACTACACAAACACTTAAATTTGCATGCTCACATGGCAAATTTCTACCAAAAAATGGATTTTTTTTTCCGAACTGTACAGTGCGGAAGCCCTATTGACCAGAACTCCAGAAGTTAACGCCTCGAACCATTGCATTTGCATGTTGGATGTTAGAAGTTCAGGTTCAGATTCTGAAGTTCAGTTTCACTGTAGCTTTGCTGGGACATCTGAAGAGTCTACATATTCAGGAAAAAGAAAGTTCATTACTCCAAGGTGAATCAAGATTCAGTACTTGAGTAACTCAATTGAGTAACTCCGAGGTGAATCAAGATTCAGAACTTGAGTAGTAATCCTTGTATGCAAAGATTACACCATGAACTATTAGCTGCAACTCTGATGATTTACTGCTCAAACTGCAAAAAATCAGCTTGCTCTCAGAAACGCGGCAGCATGAGTTACAAGGACCTTTGCACATTCCCTGCAATATCCAAACAATCACATTCCTTTTTTTCATAAGCAGCATGGTGCTCAGGGTGCATTCACACAGCAGAGTGCAATTCCATGGCACACCTGCTGCATGGACAAAACTGCGGAGAGCGATCAATCTAGTTCTCTTGTCAACAACACATCGAATAAAATATGTCAAACCAAAAATAACAGGGAAGAATGAAGCTAGAATTTTATATTGCTTTTTATATCCACCAAATGGTTATTTACAAAAGAAAGGAACAAATGTGACTTCCCTTCGACAATGAAATGACCAAATAAGCCAAAAGGTAACTTGAACAAATGTGACTTCACATGGCAAGTGATTGATATCCGAAATGGATAGTAGGATTTGGATTTGAACCCGACAAGTTCACAACAATGCTCCAAATGAAGTTTTACCATTCTTTCCATAGCTAAAAGAAATTTAATGTAAACCAGTTAACTGCAAAAACCTCAAATAGCAGAGTTTTAGTTTAGAGGAAGGAATGATCCATATATTATTTGGAACGGCACCATTAGAAAACTACCATTGATCTTTTCATTTGTCAGGAATGGTCCTGTTGCTAGGAACTTGCAAAATAGCTGATAAAAGAATATGGCAGAGCAAATTTTGTGCATTCAGAATTCAGAAATATGCTTGGCAACTAATAGCCAGATGTAGCACTAAAATCACAACATGCCACCAATAACTCATATTAGTAAAAACCCAAAAGATGGCCATATTGTAAAATAATGAGGCATGAGAAAGGTTGAATCTGGATAGCAACAGAAAACCTACCTTTTATTTTAAAGAAACCTAGCATTGTCTTCTCCTTCAACATATTTCCAAAACAGATTATAGCCAAAAAAAGGCACGCCACAAAAAACACAGGGACATTTGGTACAGGGCTTAATATGTAGCATGCATGATTTAATGGAATGCCATGGCTTTAGAATAAATATCTACATGAAAGAAATTGCAGAAGAACAAACATAGATATATCATATATGAAAGGAAGAGTAGTCATATTAGTACACCAAAAAGATGACCATCTTGTAAAATAATGAGCCATGAGAAAGGTTGAATCTGGATAAGAATAGAAAGCCTACCTTTTATTTAAAGAAACCTACAATTTTCTTCTCCTCCAACATATTTCCACACCAGATTGTAGCAAAAAAAAAAACGCCACAAAAAACACAGGGACATTTAGTACAGGGTAAGTAATATATACATGATTTAACGGAATGCCATGGCTTTAGAATAAATATCTACACGAAAGAAGCCGCAGAAGAACAAAGATAGATATATCATATATGAAAGGAAGAGTAGAGAAAGAAACGGAATGACCTGAATTTTTTTTTTTGTAATATCTGAGTATCCCCAACCATTTTCAGTGAATAAGTGTAAAAGGTACTACATTCTGTCCATAGGACACACTGAAGTCTGAAATTTCATAAAAAATGTTCACCTGCAATATAAGTATTTGCCCAATAGATGCCTCTTATCACTGGTTTCTAATGTTTAGGTGTAAATGGTTGCCTACTTATACTAATTCAAGTGAGATTACCTTCACACCACCGAGCTGACAATGTTAAAAAGGTGAATTTTGGCAAGTCCTTGGCCACTATAAAGACTGCACTCTTCTCCTTCGCCGATGCCTGCACACAGCAACAAAAAACTAATGCGAAATAGCATATATGTCCCCTTAAACTGGCCCTCAGATGTTTGTTACACCTACAAAAGCAGAAACTTGATATTGTCACATGCTCACAGGCATAGCAACAGTGTGAGAGACAATTATTACAGTAAAATAATCAGTGAGAGAGAGAGAGAGAGAGAGATGTAATTTTACCATCTATATTTCATCTTGCTCCAGATTCTTATCCAATCCTCAGAAGAACTTGTGAACTTCAGGAGTTTTTTTTTTTGGTCTAAATGTAAAGCTAATCTGGATGTGATTGTAGAAGATGTTATCTAAATGACTACATCCAGTCAGAACCATATCGCAACTGGTTTGCAGCATTAGGGGTGTCCTAAAAAAAGATGTTCTGATTTTCCTATCATCTGAATGTTCAGCCACATCATCGGTAGCCACTAAATTTTATAAAACAATTTGTTTTATAAAATGTTCTATGCTTGAACAATATAGATACGAAACAGTATATAGCATCTAGTATCATAGATTACATAGCTAGAAGAAAACACACTGCATAACGTTGTGCAGTTTCACGCAGGCATTATCTACATGGACCAGGCAATAGTCAGCAAGAGCTGAGCAAATTGGAAGTCTACCTCCTGAGAGAACAAAGCATGGAACTTTGGCACAAAATCAATGCACCATCTCTGGCTCACACCATTACATACTGCTTCCAAGTGGATCTCCATGTTGCCATGCAGCTCCGTTGCCACCACAAACTGTAGGGAGGTGTCGTCACCACCGTATTTGCCATCAAAAAGCTCAATGTCATCAGCTATACGGCCTGACCGAGCTGTGCATCGCAAATCAATGCCTCCAGGAGGCAGCCTGAGCAGCTGGAGCTCAACAGTGGCCTCGACGCCTTTCGAAATCACGGCGAGCTTCAGGCGCATCATTGGAGTAGAGTTGTTGCCACAAGGTACAATGGACAGCTCATTGACTCTGGACCAATCGCGCCGATATATACTAGGATGTTCTACTACTCCTTGGATCAGATCATGGTAACTGTGAATGCCATTACCTGTTCTCTTCATCTTCAGGTTGAACTCGAGCAAGATTTTAGGATTGGTATGAATGGCTCTCCGAGGGCTCAATGTTGGCAGCTGCAAAACACCATGTTGTGATACGACAGTGAAAGGGTGGTCCATTTCTCTGTTGAAAATGTAATTGCGCCGTCCATCACGTAAGTCCCTAATCGCAACGAAACCGGATATGTCGAGTTTGCAGGAATGAAGAGAATCAGCTACAATGATCTCGAGGGCGTAAACTTGCAACATGCTGCTGGGTGAACAAGTACACCACTCCAAACAAACAAGTCTAGGATACACCTTCCTCTTAGGTTTCAACTTTGATTCTGATTTGTCGGACAAGGTCCAGTAGTATAGTAACACTGAGTATGGTTCATGCATTGGGAGCTCTGCTTCCCTGGTGCTCCTGCTGCGTGGCTCAGACATGAAATAATTTATACCCCTTCTCGGTTCCTGCACTGGCCGTATGATCGGCGCCATGACCAGCTTAAGCTGCTCCTTGCGCCACTCCTCCCTCTTCCTAATTTCTTCTTCAGTTGGAAACTTTGGTACATATGGTTCTGAAACCTTCACCCAATCAGATTCGCCAGGAGATTCAAACAATAAGCTGTACTCAGCTTCTCCTTCCCCTCCCACTGATGGTTCCCCAGATAGGGATAACTCATTAAGCCTAAAGTCCTGGTTTTCTAGCTGTTCTTGGTGATACAGAAGACCCTGCACTTCCTCTGCTTCTAATGCAAAGATTGCACTGAGTCCCAAATCATGTCTTCTCTTTCTGTCATTGCGGCATTTAGCCGGCAAAGCTTCCTATTGAGCTGAACAAGCAAACTTGAACACGATATTGGGTTGTTATCATCGACCCTCCATTCTAGAATTTGGTGTGTCCAGCTCTCTGCTGAGGTGCAGGGCAGGAATGTGCAGTTGTCGTCATCATCTCCGCTATGGATGCCCACCGTGATTCCACTCCACCCAGTAAGAATGATGCCATCGTTGAGCCGTATTGGTACATTGTCTACTAGGAACTTGAAACTCAAAATCTGATCCACCTGTGTGTGTTCTTGCGGCAACACCGATAGCATTGCCACAGGTCTCAACGTCTCTATATAGCTTCTTTGTTCTGTGAAGCCAATGGTCTCTGGGTCCGAATAGCCTTCCACAAATCCTACTACTTGAAGCTTCATCGTCGTCAATGGCAGAATAAACCTGCCATCGCAGGCAAGCCTCCGGCGCATGACGCGAGGACATTCCTGCTCCACAAAGTTGCAGCGAACCTCCCCATCAGTGCCCATTGATAGTTTGAACCTTCGGTGCATCGCTTCACAAGGCGATTCCCACTGCATCTCCCCATGGCCTAGAGGGATGCAGGCAAGAGGCATCATCTCCAGCTCCTCCCTTTCCCTGTTCAGCTCTTCTTGCTTCCTCTTCTCCTGCTCTTGTTTCTCCTGAAGCACCATCTTTTTTTGCTCCTCTTGTTCATACATCTGGTAGAGAGTCCTGGCCAGATCCTCCAATGCGGCCGTAATGTTGATGAAATCATGGCCGACCCTAGCATACAACTTCTCCTCCGTCCAATTGGAGGGGACACGGAACCATCGCTCGGAGAAGGCAATGGTGACAGTTGAGCCGTCGGGGGGCAGGACGAAGAGCTTGTCATGGAGGCGCACCACAAGGCTTGCCATCCTCATGTTGGACACGATGGCGAGGCGGTCGCCTCCGGCGACCGGAAACCGCCTAATGACGGCCACAACCCTCACCGGCACAGAATCAGCGGCGGCGAGGGCTACGACCTCCTCCCTCCTGCTCCAAGGCCATGGCCTGGACTCGAAACAGGAGAGCGCGCCCACCCGGCCACCGTCCTCTTCCAGCTCCAGGCGAGGGGACCCGTCGGCGGCGAGGCGGGCGAAGCGGAGGGGGAATCCGCCGGCGCGCTCGGCGGAGAAGCGAGGGGTCTCCTTGCGCGACCACATGGCCTGCCCTCTCTTGACGGAGAGCTTCATCGTGAACAGCAGGTGGCAACGACGCGGCGGCGGCGGCGGCGGCGTGGGGTGTCTCGTCTTGGGTCGAGCACATTGCCACTCCTCCAGCTCCGGATCGCCCGCTTCCCACGGATTGAACGGCGCGAGCAGCTGCTCCAATTGACGAAGATGAATCTCCTCCTCATCCTGCTTTTCGTGAGATGATTTCTCGTTCAGATCGATGGGGATGAACAAGCTTTCACGGGCACGCACGTCGGCTGCCTCCATTGCGTATGCCGGCTGCCGCCGACACGATCGTATATGGAACAATTTTTCAGAGGCGAATACGTCGACCGGAAAATACCTCGCCGCCGCCGCCGCGGCGATCCTGACACTGTCGTCGCGTGCGCCGCCGGCAGCCAGAAAATCTGGGGGTTAATAAATCAGATGCATATACGCGCGTTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0320200.1 | 5 | 27593429 | T | A |
| Osa05LNT0320200.1 | 5 | 27593254 | T | C |
| Osa05LNT0320200.1 | 5 | 27593773 | T | G |
| Osa05LNT0320200.1 | 5 | 27595944 | T | C |
| Osa05LNT0320200.1 | 5 | 27596015 | A | G |
| Osa05LNT0320200.1 | 5 | 27596164 | T | C |
| Osa05LNT0320200.1 | 5 | 27596370 | A | T |
| Osa05LNT0320200.1 | 5 | 27597015 | A | T |
| Osa05LNT0320200.1 | 5 | 27597600 | T | C |
| Osa05LNT0320200.1 | 5 | 27598505 | G | A |
| Osa05LNT0320200.1 | 5 | 27598067 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0320200.1 | osa-miR5827 | Translation | 5.0 | 19.466 | 1 | 21 |
| Osa05LNT0320200.1 | osa-miR6247 | Translation | 5.0 | 16.227 | 1 | 21 |
| Osa05LNT0320200.1 | osa-miR6248 | Cleavage | 5.0 | 16.903 | 1 | 21 |
| Osa05LNT0320200.1 | osa-miR160a-5p | Cleavage | 4.5 | 23.19 | 1 | 21 |
| Osa05LNT0320200.1 | osa-miR160b-5p | Cleavage | 4.5 | 23.19 | 1 | 21 |
| Osa05LNT0320200.1 | osa-miR160c-5p | Cleavage | 4.5 | 23.19 | 1 | 21 |
| Osa05LNT0320200.1 | osa-miR160d-5p | Cleavage | 4.5 | 23.19 | 1 | 21 |
| Osa05LNT0320200.1 | osa-miR166a-5p | Cleavage | 5.0 | 17.296 | 1 | 21 |
| Osa05LNT0320200.1 | osa-miR166c-5p | Cleavage | 5.0 | 17.296 | 1 | 20 |
| Osa05LNT0320200.1 | osa-miR166e-5p | Cleavage | 5.0 | 17.296 | 1 | 21 |
| Osa05LNT0320200.1 | osa-miR160e-5p | Cleavage | 4.5 | 23.19 | 1 | 21 |
| Osa05LNT0320200.1 | osa-miR164c | Translation | 5.0 | 15.733 | 1 | 21 |
| Osa05LNT0320200.1 | osa-miR166l-5p | Cleavage | 4.0 | 17.296 | 1 | 21 |
| Osa05LNT0320200.1 | osa-miR417 | Translation | 3.5 | 17.204 | 1 | 21 |
| Osa05LNT0320200.1 | osa-miR814a | Translation | 5.0 | 14.266 | 1 | 22 |
| Osa05LNT0320200.1 | osa-miR814b | Translation | 5.0 | 14.266 | 1 | 22 |
| Osa05LNT0320200.1 | osa-miR814c | Translation | 5.0 | 14.266 | 1 | 22 |
| Osa05LNT0320200.1 | osa-miR1430 | Translation | 5.0 | 19.415 | 1 | 21 |
| Osa05LNT0320200.1 | osa-miR1861e | Cleavage | 4.5 | 23.895 | 1 | 22 |
| Osa05LNT0320200.1 | osa-miR1861e | Translation | 4.0 | 15.334 | 1 | 22 |
| Osa05LNT0320200.1 | osa-miR1861g | Cleavage | 4.5 | 23.895 | 1 | 22 |
| Osa05LNT0320200.1 | osa-miR1861k | Cleavage | 4.5 | 23.895 | 1 | 22 |
| Osa05LNT0320200.1 | osa-miR1861k | Translation | 4.0 | 15.334 | 1 | 22 |
| Osa05LNT0320200.1 | osa-miR1861m | Cleavage | 4.5 | 23.895 | 1 | 22 |
| Osa05LNT0320200.1 | osa-miR1861m | Translation | 4.0 | 15.334 | 1 | 22 |
| Osa05LNT0320200.1 | osa-miR1862d | Cleavage | 4.0 | 10.93 | 1 | 24 |
| Osa05LNT0320200.1 | osa-miR1862e | Cleavage | 3.0 | 13.677 | 1 | 24 |
| Osa05LNT0320200.1 | osa-miR1320-5p | Cleavage | 5.0 | 20.183 | 1 | 21 |
| Osa05LNT0320200.1 | osa-miR1320-5p | Cleavage | 5.0 | 18.037 | 1 | 21 |
| Osa05LNT0320200.1 | osa-miR2098-5p | Cleavage | 5.0 | 23.95 | 1 | 20 |
| Osa05LNT0320200.1 | osa-miR2863b | Cleavage | 5.0 | 21.347 | 1 | 21 |
| Osa05LNT0320200.1 | osa-miR2875 | Cleavage | 4.5 | 15.678 | 1 | 24 |
| Osa05LNT0320200.1 | osa-miR2920 | Cleavage | 4.5 | 11.465 | 1 | 23 |
| Osa05LNT0320200.1 | osa-miR812o-5p | Translation | 4.0 | 17.613 | 1 | 21 |
| Osa05LNT0320200.1 | osa-miR3982-3p | Cleavage | 3.5 | 22.012 | 1 | 21 |
| Osa05LNT0320200.1 | osa-miR5080 | Cleavage | 5.0 | 17.15 | 1 | 21 |
| Osa05LNT0320200.1 | osa-miR5160 | Cleavage | 4.0 | 12.851 | 1 | 22 |
| Osa05LNT0320200.1 | osa-miR5338 | Cleavage | 4.0 | 14.563 | 1 | 21 |
| Osa05LNT0320200.1 | osa-miR5490 | Translation | 5.0 | 20.116 | 1 | 21 |
| Osa05LNT0320200.1 | osa-miR2275d | Cleavage | 3.5 | 7.25 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0320200.1 | 5 | qRNw5 | Resistance or Tolerance | Other soil stress tolerance | C1447 | RM26 |
| Osa05LNT0320200.1 | 5 | qRSd5 | Resistance or Tolerance | Other soil stress tolerance | C1447 | RM26 |
| Osa05LNT0320200.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0320200.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0320200.1 | 5 | nan | Physiological trait | Eating quality | C246 | C1447 |
| Osa05LNT0320200.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0320200.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0320200.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0320200.1 | 5 | tp5b | Morphological trait | Culm/leaf | RM26 | C1447 |
| Osa05LNT0320200.1 | 5 | qMRL5-1 | Morphological trait | Shoot/Seedling | RM26 | C1447 |
| Osa05LNT0320200.1 | 5 | qTDW5-1 | Morphological trait | Shoot/Seedling | RM26 | C1447 |
| Osa05LNT0320200.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)