© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0320500.1
CGGGGGAAATAAAGAGCATTTTATATTGGTCCTTCAAAGTGGAAATCATTCTGTATTTGTAAACTGCCTTGTAACATCATCTATGATTATGGCATTGGATCCTAAGTTTGGTTTAAACTCAAGTTCAAACTTGAATTTAACCAAGAAACTGTAAGATTATGATCAGCAGCATTTCTTCCTCCCAATCTCAACGAGCATGGCCATCAGGGCTTCACACATCTGAGTGGCATCAGCCTCGGCATGATCCTTTCTCAGCGTGGAGTGCACCATCCACGCATGGTCCAGCCTCCTCTCCGGCCTCACCACCACCGACCCGGGCACCTCGGCGTCCCGCCGCGTCACCAGGCCGTCGCTCCTCTCGCCGTAGCGCAGCCTCAGGTGGAGCGCGCTGACGGCCATGGCCGCCGAGGCCGGCACGACCACGGGGAGCTTCAGAGAGGCGAGCAACGATTCGGCGTACTCCGATGACGACAGGAACCGCGGCAATGGGAGCCATGGGAGGAGCTCGGCTTGGGCGACGCGCGACAATGTCACGAGCATCGTCGGGGCGGTGCTGGCCTCGGTGTGGAAGGAGATGATCGGCAGTTCGTCCACGGGGAGCTTGTGCTTGGAGATGAAGTCCCTTCTCTTGTCATATGTGAGATCCTCCAAGGCCCTTATATCACCCTTGATGAGTTTGCATATTATCAGTTCCATGATCCTCCTTGTCTCCTTATCAGCAATCTGGCCTTTGCGAAGGATGTCGGAAGCTATTGGGGTGCCACCATATGGGCTCTGAACCAATGCCAGTCCGGCAACCTTGCCCTTGAGTTCAGACCAGTACAACGAAAGCGCCGCAGCCGCATCAACTCCACCTTTGCTATGGCCCAGGAGCAACACCTGTTTACCAGAACCCCAGTACAGCTCTTCAATGTATAATTTCAGTTCCCGTGCATTTTTCTCCACTGATGCCTCACTATGAATCCTTGCAATATGGCAAGTAAGCCCCATCTTCGAAAAGATTCTTTTCGTATTGACGAAGTAAAGTGGACTGTGATTACTAAAAAGTCCAGGGATGAATAAGTAAACCAGTGTGTTAGGAAGATGATGCATGCCATTTCTGAAACATTAAGCTTCTTTTAGTATCATTGGTCTTTGCATGAACTGATAATAATTGAATGTTGGACCTCCATATGGATTGATACCAGGAATAAATCTGTTACTTCCGTAAATGATGTTCAGTGGCTCAATTCCCTATTGTTGTTAGATAGGAGTAGTTCTACATGTAGGGTCCGTAAAAGATAGTACTCTCCAAATAAAGTCAGTGGTACTTTAATAGGCATGAACAAAAGATCACCTGATGCCATACAAAAGCTCCTTGAAACGATCTGTACCATCAACTGAACAAGGCAATGTTTTTGTTCTTTTTAGCCATCCTATATCTTTAGAAGATCCCTGTAATGTTGTCCAGAAACGATGTAAGAACCTAGCTAGTTTAGCATGAATTTCACTTGCAACAGCACTGCACAGTTCTCGCAAATGGAATGCCAACTGTTGTCCCAATCTGAAGTCATGCAAAAAACTGGGAAACCTTTGACAAATACTGGACAAGCCTTTTCTGACAACAATGGCTTCAGATAGTCCATTTGGGGTCTGGTCTTCTGTAGAATTACTGACAGACAGCAAGGGAGCCTCTCCACGGATGTATCTTTCGGTGGCAGGTAATGATCTTTTATAACAAGGAGAGAACTGGAATCCATGATGTTCTGGGATCCAATCAATATACCCAAACACATGTTCTATTAATCGTGTCAGTTGATGTCGTAACTGCCAAGCAAGGTCTAGGATGCGTGAAAAATAGTCCTCCATATGTGTTCCAGGATGAAAATGACAAAGAGCATCACTCGTGTTGTTTTACCTTCCCTAAAATCCCGAGAAGAAGCTCGATCAGCGTCCCGCCTTTTGTCTCTCCCAATGTGGGGGGCGGCGTGCGTGGATGGATGGAGGTAGGGAACGAGGTCAAAAAGAAGCCCTCACGACAATCCGCGGCGAACTGGCTTGCCTGCGCTACGTGACGCCGCGACGACGCGCGGGTGAGGCGCATGGGCGCCGCGTGGGGATGGTCCGCTCGAGCGGGGCTTCCGTGGCGCGCCATGCGTGGTGGCCGGTGGGAGCGGCGCCCATACTCCGGGAAAAGTTTTGGTCAAGCTTCTCTGGAAATCTTTGAACCTATCTGAATGAGCAGTGACCCCGCTTCCAGTGTTTGCTTGTGTTGTGTGGTCTTGTCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0320500.1 | 5 | 27761642 | A | T |
| Osa05LNT0320500.1 | 5 | 27762352 | A | T |
| Osa05LNT0320500.1 | 5 | 27762462 | T | C |
| Osa05LNT0320500.1 | 5 | 27763606 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0320500.1 | osa-miR5791 | Cleavage | 4.0 | 24.55 | 1 | 21 |
| Osa05LNT0320500.1 | osa-miR5512b | Translation | 5.0 | 13.472 | 1 | 21 |
| Osa05LNT0320500.1 | osa-miR156b-3p | Translation | 4.5 | 18.309 | 1 | 21 |
| Osa05LNT0320500.1 | osa-miR166a-5p | Cleavage | 4.5 | 12.887 | 1 | 21 |
| Osa05LNT0320500.1 | osa-miR166e-5p | Cleavage | 4.5 | 12.887 | 1 | 21 |
| Osa05LNT0320500.1 | osa-miR171i-3p | Cleavage | 4.5 | 18.637 | 1 | 21 |
| Osa05LNT0320500.1 | osa-miR166j-5p | Cleavage | 5.0 | 12.467 | 1 | 21 |
| Osa05LNT0320500.1 | osa-miR1850.2 | Cleavage | 5.0 | 20.729 | 1 | 21 |
| Osa05LNT0320500.1 | osa-miR1860-5p | Translation | 4.0 | 23.305 | 1 | 21 |
| Osa05LNT0320500.1 | osa-miR1866-3p | Translation | 4.0 | 18.965 | 1 | 22 |
| Osa05LNT0320500.1 | osa-miR1882e-3p | Translation | 5.0 | 14.508 | 1 | 24 |
| Osa05LNT0320500.1 | osa-miR2873a | Cleavage | 3.0 | 18.466 | 1 | 24 |
| Osa05LNT0320500.1 | osa-miR5512a | Translation | 5.0 | 13.472 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0320500.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0320500.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0320500.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0320500.1 | 5 | tp5b | Morphological trait | Culm/leaf | RM26 | C1447 |
| Osa05LNT0320500.1 | 5 | qMRL5-1 | Morphological trait | Shoot/Seedling | RM26 | C1447 |
| Osa05LNT0320500.1 | 5 | qTDW5-1 | Morphological trait | Shoot/Seedling | RM26 | C1447 |
| Osa05LNT0320500.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Osa05LNT0320500.1 | 5 | qRNw5 | Resistance or Tolerance | Other soil stress tolerance | C1447 | RM26 |
| Osa05LNT0320500.1 | 5 | qRSd5 | Resistance or Tolerance | Other soil stress tolerance | C1447 | RM26 |
| Osa05LNT0320500.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0320500.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0320500.1 | 5 | nan | Physiological trait | Eating quality | C246 | C1447 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)