© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0320700.1
GACACACAGAAAGTACTCATCTTTGACATTTGCAGCAGAGTTGCACAAGGGCAGTATCAAACATGGGCAGGGAGTTGCACAAGGTAAAGGTTGCACGAACAGCAGTATGCACAGCAAGATCGTCATCCTGCAGGATGTTGGTTTTTCAGAAGCACATTTATCATTGTTTCTACCTTGGCTCCACTGGTGAGAGGACCTCCACTTCAGCCCACCAGAGCGGAGACAATCTGGGCGTTGCTGCATCCGGCGAAATGGCTATGGTCTCTCTCAGCCTTGTGGTGATCTCCCTCATGCCTGGTCTCTTCGTTGGGTCACTCTGGATGCATTCCATGATTATCTGACAGATCACATCTAGCTCATTTTCTTTGTGTGACTCTAGTACTGAATCAAGCATGGAGGCTATACTCCGACCTTTGATAATGCACCCCAAAGCCAGATTCGCCAGGGAGCCCTCGTTTTCAGAGTAAGGGGGTTTCCCTGAGATGATTTCAAGAAGCAGTATGCCAAAACTGTAAACGTTCCCTGCCAGTCTAGCAGATATTGGTTCATGATGATCATTATTCGCTGTCGACTTTTTGCCGTCGGAAACCACTTCCTGCCAAACACTCAAGTCTGCAATCTTTGCAGCACAATCTTCAGAAAGAAATACTGCACTTGAATGCAGATCAGGGTGCACGTTGGCAGGGTTGAGCTCATGCATGTGCTGAATACAGTAAGCTATTCCCATGATTATTCTCATTCTACTTCTCCAGTCGATGTGATCAAAGGCCTCATCATGGAGATTCTCATAAAGCGTCCCATTTGGTGCGTATTCGAACACCATCACCCTCGTGAAAGGTTCTTCCTCCTCACAAAACCCCAGCAGATTGATGAAATTCTTATGATTTATTCGTGAGAGCGACTCTATCTTTTTCCTGAAACAATCTTCACAGTGCTTTGACCAATCTTTGCTGGATTTAATCGTTGTCGATACAACGGCGATCTCAACACCGGATGATAAGGTTCCCTTGTAGACAGTGTAGTATGGATGACTTGCCACAATATTACTGAAGTCCTCACAAGCACGCTCCAGTTCTGGACGCTGTAATTGGGGCACTCCTGACACAAATGCCTTCTGCAGCTGGCCACTGAGTCCAGTCCTCCAAGGGCCAATAGTCGCAACGGATTTCTTGCGGCATGGCAAGAACATCCATGCCATGCCAGCAAGCATAATCAAACCAGCCACTGGAATCACAACTATATACAGCCACTTCTTGAATCCTTTGCTTGATCCTTTATTTGCAGAAGCCTCGGCAGGGTGGGATGAACTATCTAGAGGCTTGTAATTTGGATCATTTTGCAGTTGATGAGATGTTGGAAACGTCATGTTTCCAACTGTTGGGAAATGATCTTTGTAGAGTAGAGCAGCGTGATTTCTGTCATGAAGTAGCCTCCGGTTGCTAAGCTGAACGGGTAGCTCGTCCAGTGAGGAGCAACCGATCACGACAGCTTGGAGAATCAGCACCACGAGCACGAAAGAACTCGATGAATCCATCACTGGGATATTCGCGACCAACACCTGATGATTCAGTTGCTAGTGTCTTGAATAAATCAGAACACAGGGGCAGAATCATCAGCCAAATTCACCTGAAACACAGGTGTTCATATCTTACTGTCAGATGCCTTCTTTTGCTTGGCTGCTGTTCAGACTTCAGAAATAATTCTGCTCACACAGTGCAGAAACTGGAGCATGCAAGGGTTCAGGCTTCAGACTAGACAGAGGCTAGAGGAAGCAACAGGAGCTCGATTCTTGGTAGTAGTTGAAGAACCAGGAGCAAATCTTCAGATAAAGAAAAAAAAAAGGGGGAGATTTTTCTGCAACGACTAAACTGGATACAGGAGGAATGGGTAAAACTCTTGGTTCACTGCATTCCCTTGTATTCTTCTCTCTTTGTCAAACATCTCGGTTGTGTTGATCAGTTAATGCAGGGATTATTAAACAAGAAGGAAGAGGACGAAGACGGAGACTACT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0320700.1 | 5 | 27887241 | G | A |
| Osa05LNT0320700.1 | 5 | 27889095 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0320700.1 | osa-miR5820 | Cleavage | 3.5 | 18.633 | 1 | 21 |
| Osa05LNT0320700.1 | osa-miR160a-5p | Cleavage | 4.5 | 23.54 | 1 | 21 |
| Osa05LNT0320700.1 | osa-miR160b-5p | Cleavage | 4.5 | 23.54 | 1 | 21 |
| Osa05LNT0320700.1 | osa-miR160c-5p | Cleavage | 4.5 | 23.54 | 1 | 21 |
| Osa05LNT0320700.1 | osa-miR160d-5p | Cleavage | 4.5 | 23.54 | 1 | 21 |
| Osa05LNT0320700.1 | osa-miR159a.2 | Translation | 4.0 | 22.392 | 1 | 21 |
| Osa05LNT0320700.1 | osa-miR160e-5p | Cleavage | 4.5 | 23.54 | 1 | 21 |
| Osa05LNT0320700.1 | osa-miR172a | Translation | 3.5 | 17.824 | 1 | 21 |
| Osa05LNT0320700.1 | osa-miR408-5p | Cleavage | 4.0 | 18.816 | 1 | 21 |
| Osa05LNT0320700.1 | osa-miR408-5p | Cleavage | 4.5 | 20.911 | 1 | 21 |
| Osa05LNT0320700.1 | osa-miR408-5p | Translation | 5.0 | 15.817 | 1 | 21 |
| Osa05LNT0320700.1 | osa-miR172d-3p | Translation | 3.5 | 17.824 | 1 | 21 |
| Osa05LNT0320700.1 | osa-miR435 | Translation | 4.0 | 16.917 | 1 | 20 |
| Osa05LNT0320700.1 | osa-miR444a-3p.2 | Translation | 5.0 | 19.95 | 1 | 21 |
| Osa05LNT0320700.1 | osa-miR1426 | Translation | 4.5 | 17.824 | 1 | 21 |
| Osa05LNT0320700.1 | osa-miR444d.2 | Translation | 5.0 | 19.95 | 1 | 21 |
| Osa05LNT0320700.1 | osa-miR444e | Translation | 5.0 | 19.95 | 1 | 21 |
| Osa05LNT0320700.1 | osa-miR1865-5p | Translation | 3.5 | 18.201 | 1 | 24 |
| Osa05LNT0320700.1 | osa-miR1875 | Cleavage | 5.0 | 23.81 | 1 | 24 |
| Osa05LNT0320700.1 | osa-miR1846e | Cleavage | 4.5 | 21.694 | 1 | 20 |
| Osa05LNT0320700.1 | osa-miR5159 | Cleavage | 4.5 | 19.476 | 1 | 24 |
| Osa05LNT0320700.1 | osa-miR5492 | Cleavage | 3.5 | 15.623 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0320700.1 | 5 | qRNw5 | Resistance or Tolerance | Other soil stress tolerance | C1447 | RM26 |
| Osa05LNT0320700.1 | 5 | qRSd5 | Resistance or Tolerance | Other soil stress tolerance | C1447 | RM26 |
| Osa05LNT0320700.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0320700.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0320700.1 | 5 | nan | Physiological trait | Eating quality | C246 | C1447 |
| Osa05LNT0320700.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0320700.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0320700.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0320700.1 | 5 | tp5b | Morphological trait | Culm/leaf | RM26 | C1447 |
| Osa05LNT0320700.1 | 5 | qMRL5-1 | Morphological trait | Shoot/Seedling | RM26 | C1447 |
| Osa05LNT0320700.1 | 5 | qTDW5-1 | Morphological trait | Shoot/Seedling | RM26 | C1447 |
| Osa05LNT0320700.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)