© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0320800.1
ACTCAGAAAACCCATTCTTTCAGTGATACTCCTCCAAAGAGTAACATGCTGGGAGCCATACAAAAAGGTTTCTGCTAAATGGTACTAACCACTAAAACAACTTAGCTGCTATACATTTATTCAGTGCAACACTATTATCAACAGAAAACACTGGCTTATCTAGACGCCTAGTTTTTTTTTAGATAAAGGAGATTTCTTGGGAAATTCTCGTTAGATACTTGCACCATAAACATACTAGCAAAAGGTTAAATGACCAGCATGACACTTGGTACAACTATTCCAAGTATCTCGCAATGTGACTTGGCAGCTCGGCGTAGTTCCCTTCCATAGTCAGGAGCTGGTACAAAAGATCCTTGCGCAAGGCAGTAATACTACCCGAATCTAGACTTCTCTGCAGCTTGCCATCATGGAACTCACGCGAGTAGTATAATGTGTAAAAACCAGAGTTCCTACTGCAGCAGCAAAATGATTTAAATTTGTAATGGGATGAATCTCTCTCTTTTTTCTGTGGCATTGGCAGAAGCCACTCACCTTTGGCTCCTTGGGCTAATCCCTGTGTAGTACGAAAACATCCATTCGTTTGGGTTAATATCCCAGCCGCCATAGAATTTGTTTATACATGTTAACAGGCCTGCGTGGATCATTGTGGCTGTTCGATGGTGCTTACTGCTTAGCACTCACATTGTAAGTCTCCCGCTGCTGCAAGACAGGGTCCAAAATGTGCATTTGCCTCTTCTCCATGTCCCAAATGTAGCATGACCATGTACCGCCAGCTAGTTCAACTGGGGCAATGAGCAGTTGACAGTTCTGTATTTTGTAGCCATTAACACGTTGATCAAACATGTCACTGACTTCTTTCATGGAACTGAAGTTTGGCTCAATCATCAAAGCGCAAATTGGGGTGGGAAGAAGTGGCGCCAACGCTGTCCAGATGGGTTTGTATTCATCTTGGCATCTAACTGTTGGTAGAGTCTGATAAATGCCGAACAAAGGTCCATACATAGATTGCCACCGTGGGTGACCTGCATTTTGAGCTTCATGGCACTTATCTCAATTGGTGTAGGCTTGTCGTGCTTGAACCAAACCCTTCATATAGGATAAACAATTAATAAGCAACACAAAGTTTATTTGTAATGAAAATTCACACATTTTTAAAGATTGTTTTTCACAGACCCGGTTATATCTTCATCACGTGACTTCAACTCCAGCCAACGGTACAACCTCCGAGCTAATTTAGCATTTGGCCATTCGTGAAGTATGGGCATTGAAAACGGTGACATGCAAGCTGGCCTTGGACATGCCACCTCTTTCGTCATCTGTGTCTCGCAATGTTCTGGTTGTCGTTGGCACGTGACAACCGCGAGGTTGTCATCGTTGCTTTGATCCAATGTGGCACTGGCTCTCATGGTGGCTTCTCCCACAGCTGCTGCTGATACCAACCATTCAAGGCCACATTTGTCTTGCATTTGGAATCCTTGATCCAGCTCATGGTGGACTGCTGCCGTCACTTGGGCTGATGAGTTCAATGGACGGTGATGCGCAGTAGGGGCCATGCCCAATATCGGATTTGCATGGTCAACAGCTTGATAGCTTTGTTGGTCTATATGCTCGCTTGCTTCATTTTCCGAGTTGCTTGGCCCTAACAAGTCACCTCTCAAATCAACGGGGGCTTGGGATCTATTGGCTGCAGAAGCCACGCGTGACAACTTGCTTCGTTTACGAGTAGTCTTGGCACCTTCTTCGACATGCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0320800.1 | 5 | 27952441 | C | T |
| Osa05LNT0320800.1 | 5 | 27951444 | G | C |
| Osa05LNT0320800.1 | 5 | 27951699 | G | A |
| Osa05LNT0320800.1 | 5 | 27951340 | G | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0320800.1 | osa-miR5804 | Translation | 4.5 | 15.89 | 1 | 21 |
| Osa05LNT0320800.1 | osa-miR5516b | Cleavage | 5.0 | 19.789 | 1 | 21 |
| Osa05LNT0320800.1 | osa-miR7695-3p | Translation | 5.0 | 23.519 | 1 | 21 |
| Osa05LNT0320800.1 | osa-miR399d | Translation | 5.0 | 22.39 | 1 | 21 |
| Osa05LNT0320800.1 | osa-miR399j | Translation | 5.0 | 22.39 | 1 | 21 |
| Osa05LNT0320800.1 | osa-miR167e-3p | Cleavage | 3.5 | 14.975 | 1 | 21 |
| Osa05LNT0320800.1 | osa-miR167i-3p | Cleavage | 3.5 | 14.975 | 1 | 21 |
| Osa05LNT0320800.1 | osa-miR169i-5p.2 | Translation | 5.0 | 14.743 | 1 | 22 |
| Osa05LNT0320800.1 | osa-miR418 | Cleavage | 4.5 | 15.874 | 1 | 21 |
| Osa05LNT0320800.1 | osa-miR530-3p | Cleavage | 4.5 | 16.134 | 1 | 21 |
| Osa05LNT0320800.1 | osa-miR1852 | Translation | 5.0 | 16.786 | 1 | 21 |
| Osa05LNT0320800.1 | osa-miR1428e-3p | Cleavage | 5.0 | 19.434 | 1 | 21 |
| Osa05LNT0320800.1 | osa-miR2120 | Translation | 4.5 | 13.578 | 1 | 24 |
| Osa05LNT0320800.1 | osa-miR2120 | Translation | 5.0 | 18.024 | 1 | 24 |
| Osa05LNT0320800.1 | osa-miR2868 | Translation | 5.0 | 14.739 | 1 | 20 |
| Osa05LNT0320800.1 | osa-miR395x | Cleavage | 5.0 | 17.058 | 1 | 21 |
| Osa05LNT0320800.1 | osa-miR5516a | Cleavage | 5.0 | 19.789 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0320800.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Osa05LNT0320800.1 | 5 | qRNw5 | Resistance or Tolerance | Other soil stress tolerance | C1447 | RM26 |
| Osa05LNT0320800.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0320800.1 | 5 | qRSd5 | Resistance or Tolerance | Other soil stress tolerance | C1447 | RM26 |
| Osa05LNT0320800.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0320800.1 | 5 | nan | Physiological trait | Eating quality | C246 | C1447 |
| Osa05LNT0320800.1 | 5 | tp5b | Morphological trait | Culm/leaf | RM26 | C1447 |
| Osa05LNT0320800.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0320800.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0320800.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0320800.1 | 5 | qTDW5-1 | Morphological trait | Shoot/Seedling | RM26 | C1447 |
| Osa05LNT0320800.1 | 5 | qMRL5-1 | Morphological trait | Shoot/Seedling | RM26 | C1447 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)