© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0322100.1
GTGCATTGATAAATCTATTTTATTTAAATTACCTTGTTCCGGATGGAGGTACTATAGGCTTCCTAGGTGCCATGCTATGGATCTATGGTCACCAACTCACAAAGGACTTCTCTTTTGCCCCCTACTGACTGCTGCATAAGATTTTTTTTCCCAACTCAAATAGACTTGGATAGTTCTGGTCCGTGTTTGTGAAGTGCAGAAGAGTAGACCGAACCATATGGTCTATTAATTAATTCAACACGCTCAATAATAACTTCAACTTGATTGCCCACATTCTTCTATAATCTACGGAGTTGATGGCTACACTTCCAAGGTGAGATATCACTAAGTTTCAACCTAGACATTCTTCACGACAAAACTTGTACATCATAATGGACCAACTGTCTTGCAAAGTTGAAACAGACCTACGTTTGATGATGCCTTTCAGATGTACCGGGTGAAGTTCTTTTGAGCAAAGGATTGACCAAAAACGGCCACTGCTAGAATATCTTGCTGATAGGCTTCAACTCTGTAGGTAAATGATCATAGTTGCCCGAATCAACCTCTGCCTGGAACATGGGCCGCTTCCCGTACTCTCGCAAAACACCTGGTGCCAAGTGCTCCTTGCTTGGTGTTAGCATTACATAGTTTGGATCAGCCCTTTGGTAACTTGGCTGTCTAAGATCCTCAACACGAATTCCAAATCCATATGATCTTGTCCCCTTCAAATGATCGTTCACAGCTGTGACACTAAATGTGAAGGATGGTCTCCACCATGACTTGAATGCCAAAGCTACAGAAGACTTGGAAGGACCTAGCTTTCCCTTGAATAGGAAGTTCTTATTAGCTTGCCAACTTGCTGCAAACTGAAACAAGGAATTGTTGGCACTCTCTGATGGTTTATCTTTATCAATCCTTGTAGCCAATTCAAGCCCAAAATCAATGTAGTTTGTGATTCCAACAATCTGATCATCTTCAAAAGGGTTTTTAACCCTTCTTTGAACAACCATGTGTTGATAGAACGATGCAATGAACTCTGTACTTCTGGCAAGCTCTAGAGAAAAAATGAAGGAAGGACTGAGTGGGCTTGTTAATCCTACACCATAACTGATTGCACAATTCCAGTTCTTCCAATCTGTATATGGCATAAGATGTTTGTTTCCACTAAGTGGCTTGTATTGCACTCCTGCACTTAAGCTCCCTTTTCTCCCGACCAACCATGCTCCAGAGGGTAGTTCAGCAGATCCAGGAAATGGCACAAAGGAAGACCCAAATGATAGATTCTCTGAACCGTATCTTACTCCCATGACACCATAATCCTCAGAACGCACCCTGTTTCCCATTAGTAAAGGGAATGTCCCAAACGCACCAACACGGTACTTAGGATGGTAAGCACATGACCTAACCTGCAACATTGGGTTTGAAGTTGACACAAGAAGGTCCACAAAGGTATGGGGATCATCTAAATCTTTCTGCCAGCGAAATAGAGCATCTCCCTTTACTTGTGTTCCGTCTATTTTATCAGCAGCTGCAGACACAGTGGCAATCAAATCAACATGAGGATCCTCCAGTGGCTTCAGCATGACCCTTGAGGTCATATTCCCCGCATGATCAAAGTAGTCCTCAAACAGATTCTGCAGCGAGAGCTTCCCAAACATTAGCTCATACGCTGGCACCGACATCCTGGTGCGGGCGGCGATGGGTGGGTAGTCGAAGAGCGGCGGGACGAGCACCATCGGCGGCGGCGGCTCCGCCTTGCTCCAGAAGATCCCCATCTCTGACGAAGCCGAGTGCGCACGCTGCCTCTTCTTCTCCCTCTCCTTCCTTCCTGAACCCTCCTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0322100.1 | 5 | 28767318 | C | T |
| Osa05LNT0322100.1 | 5 | 28768405 | A | G |
| Osa05LNT0322100.1 | 5 | 28769738 | G | T |
| Osa05LNT0322100.1 | 5 | 28769894 | G | A |
| Osa05LNT0322100.1 | 5 | 28770122 | T | C |
| Osa05LNT0322100.1 | 5 | 28770201 | T | C |
| Osa05LNT0322100.1 | 5 | 28771397 | C | T |
| Osa05LNT0322100.1 | 5 | 28771721 | G | A |
| Osa05LNT0322100.1 | 5 | 28772315 | T | C |
| Osa05LNT0322100.1 | 5 | 28772543 | G | C |
| Osa05LNT0322100.1 | 5 | 28773377 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0322100.1 | osa-miR5143b | Cleavage | 4.5 | 15.781 | 1 | 24 |
| Osa05LNT0322100.1 | osa-miR6253 | Cleavage | 4.0 | 7.587 | 1 | 22 |
| Osa05LNT0322100.1 | osa-miR439a | Translation | 5.0 | 18.818 | 1 | 21 |
| Osa05LNT0322100.1 | osa-miR439b | Translation | 5.0 | 18.818 | 1 | 21 |
| Osa05LNT0322100.1 | osa-miR439c | Translation | 5.0 | 18.818 | 1 | 21 |
| Osa05LNT0322100.1 | osa-miR439d | Translation | 5.0 | 18.818 | 1 | 21 |
| Osa05LNT0322100.1 | osa-miR439e | Translation | 5.0 | 18.818 | 1 | 21 |
| Osa05LNT0322100.1 | osa-miR439f | Translation | 5.0 | 18.818 | 1 | 21 |
| Osa05LNT0322100.1 | osa-miR439g | Translation | 5.0 | 18.818 | 1 | 21 |
| Osa05LNT0322100.1 | osa-miR439h | Translation | 5.0 | 18.818 | 1 | 21 |
| Osa05LNT0322100.1 | osa-miR439i | Translation | 5.0 | 18.818 | 1 | 21 |
| Osa05LNT0322100.1 | osa-miR395w | Translation | 5.0 | 20.027 | 1 | 22 |
| Osa05LNT0322100.1 | osa-miR2919 | Cleavage | 3.5 | 18.702 | 1 | 19 |
| Osa05LNT0322100.1 | osa-miR3981-5p | Translation | 4.0 | 13.289 | 1 | 21 |
| Osa05LNT0322100.1 | osa-miR5143a | Cleavage | 4.5 | 15.781 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0322100.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Osa05LNT0322100.1 | 5 | nan | Physiological trait | Eating quality | C246 | C1447 |
| Osa05LNT0322100.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0322100.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0322100.1 | 5 | qRNw5 | Resistance or Tolerance | Other soil stress tolerance | C1447 | RM26 |
| Osa05LNT0322100.1 | 5 | qRSd5 | Resistance or Tolerance | Other soil stress tolerance | C1447 | RM26 |
| Osa05LNT0322100.1 | 5 | qTDW5-1 | Morphological trait | Shoot/Seedling | RM26 | C1447 |
| Osa05LNT0322100.1 | 5 | tp5b | Morphological trait | Culm/leaf | RM26 | C1447 |
| Osa05LNT0322100.1 | 5 | qMRL5-1 | Morphological trait | Shoot/Seedling | RM26 | C1447 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)