© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0322400.1
GAAAGAAAGAAAGATTGGGGCTTGCCCTTTATATTTCGTTTTACAAAAGGGAAACCCTTCCTTGTAGTATCATTCTGTATAGTACACCACATGTTACAGTGCTTTGAGGGGAGGAAATTCTTACACTGTTGTATCAACTTAGGAAAGCATCTACAACTCCCAAAGAATGCACAACTTCGCTAACTGTGTACAGTGTTTTAAATGGGGGAAATGATAAATCAAAATTTGACTTCTATACCTACATCCTCTGGCAATTCAATTCCCAACTAGAAGATCGGCAGGTCCTTCATGGGAACTGTATCTTTACCTCCAAATGCAAAATGGAATTGAGGCCTGAGCTGAATATCTTACCACCAGATACCAAGCACACAATTTTCAGGAACGACCTTCTATCAAGGTCATTTACTTGGCAATTCTACCTATACAATAGTAATTTTCACAAGAATAAGTGAGCAGAAATACAGGCATGCAGATATGGCAATCCCTGCAATAAAATTTTGATATAGCCGATTGTTGTCTCTACTGGGAATAAAAGCTCCCTTCAGTACACCTGTGATCTCAAACACCCGGTATGATAGAAGAAGATAGATTGCTGTAGTAAGCATGAAGTTAAGCAATGGATAATCTGGTACAAAAGATAGGAGCCATTTTGGCTGCCCATTTGGCGTGCTAGACCTGAGCCAAATGTGAATCTGGGAAATGTATGTCTCTAGTGTGATCTTGCCAAGCCAGGCGAAAAGAGCCAAGGAGGCACTCCTCAACTGCTGGGTGCAGTTGCGTAGGCAGATATAAACAGTGATAGGAATCCATGACGTGTAGGGATGGTACTTGTTGTATGTAATTTTGTCTAGCCTGTAGATATATTCATACCATAGGTAACCAGCCGTCAAAGAAAGAGTGACAATGGCTCCCTTGATAAACAGTCTAACCTTAGTCTCAGATTCCTCCAACTTCTCCATCCAACGTTCAACATTAGGGTGGAAGTAAGCATAGATCATTCCAATAATCCATATGTATCGATCAAGGCCAGATCGGAAATGCCACTCATGTAGCAGGGGTAAGTTTGCCTTGGAAGGCTCTGGATCCTTATATCCTAGAAGAAATGTAAAGGGGGCCCATAAAAATTCAAATACCCCAGGAATTTCCCATATCAAAATGACAGTCAAGAAGCAGCAAGCAATCTTAATAGCCATGACAGATGGTTTCTCATTGTACTTGTTGAACAGACCAAGTGATCCGTATACCATCAGAGTAAAAAGTGTGTGCATTGGACATATATAATACAGCATGTAATCATTGTCAAGGACAATGCAACAGAAGGCCACAAAGAAATTTAGCCTCCACATCATCTGTGCAAATCTTGCAATGCTAAAATCTTTCTTGATATAATAATATGAGAAATTCCCGAATCCAGTCATCCAGACATAGGCAGCAATGAACACCCGAATTGCATTGTATATTTCTGCATCCACCCTTTCCATTCCTCAGTTTGGTGACGATTAAGATAGAGTATTGACTTTCCAGTGAAAGCTGATTTTTCATTGTGCTTCTTAAGTGAAGTAAGTGCCGATGCTATGATAAGAAGAATGTACAGAAACAGAAACAGGTCGCGGTTGTAGCTCTTCTTAGTTTCTGGAAATATATTTGTCCGGTCACAAATGTAAAAGTAGACCAGAATAATGCCCACTTCGGCCATTGCTCTTAGCACAGCACGGTTTTCAAGCAGAAAAGACTCGTCCATTGTTATAAACCGTATTAAATTTGCTTTTGTAGACATGTTTCGGAGCTTTGTAGATGGCGATTTTGACTGCCCTCCTTCAAGTAATACAGCCTTATCATCTTCCTTCATAGTCTCATTCTCCAAATTAGCATCCGAGTGAACTTTCCCATACAACAAAGATTTCCTGTATTCTAAGATTTCGGCGTAGATCCATCCAATGAGGACAGGGAAAAGACCCAGCAAAAACGAAACTTGGCCGGGCGTGACGGGGCCGAAGACCTCCATTCCTCTCGCGGGGATCAAGATCCAGATCCACGGGAGACGAGTCAACAGCAGCAGCAGCAGCAGCAATCAGCAGGCCATGGCGCGGGTAGGGAGGGAGAAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0322400.1 | 5 | 28960416 | G | A |
| Osa05LNT0322400.1 | 5 | 28960718 | T | A |
| Osa05LNT0322400.1 | 5 | 28961478 | T | G |
| Osa05LNT0322400.1 | 5 | 28963744 | A | G |
| Osa05LNT0322400.1 | 5 | 28964267 | A | G |
| Osa05LNT0322400.1 | 5 | 28964516 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0322400.1 | osa-miR5541 | Cleavage | 4.5 | 14.824 | 1 | 21 |
| Osa05LNT0322400.1 | osa-miR399h | Translation | 5.0 | 20.034 | 1 | 21 |
| Osa05LNT0322400.1 | osa-miR399k | Translation | 5.0 | 20.034 | 1 | 21 |
| Osa05LNT0322400.1 | osa-miR166k-3p | Cleavage | 5.0 | 17.358 | 1 | 21 |
| Osa05LNT0322400.1 | osa-miR166l-3p | Cleavage | 5.0 | 17.358 | 1 | 21 |
| Osa05LNT0322400.1 | osa-miR166i-3p | Cleavage | 4.5 | 17.358 | 1 | 21 |
| Osa05LNT0322400.1 | osa-miR2098-5p | Translation | 5.0 | 21.091 | 1 | 20 |
| Osa05LNT0322400.1 | osa-miR2101-5p | Cleavage | 4.0 | 13.31 | 1 | 22 |
| Osa05LNT0322400.1 | osa-miR2923 | Translation | 3.0 | 23.676 | 1 | 22 |
| Osa05LNT0322400.1 | osa-miR5506 | Translation | 4.0 | 13.369 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0322400.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0322400.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)