© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0336200.1
GACAAATCCAAAACTGGGTAAATGGTTTGTCTTTCTTACACATCAGGAATCCAGACGAGGGAAGAAGGTACATTATGTACAGCAAGCATATGGTGAAAAGAACCTATATTTACAACTGCTTACAAAGGGAATCGAAACAAAACTAAACATACGAATATACGATGAAAAGAATCATAATTGGACAATGGTGGCTGCACATATGACAAGCTATGGATGCTTCTATCTCACGATCACATCACGAGCTCGGTCTCTTAATTATTTTGATACAGTTCGATGAGTGGCCACTGACCAAAAGGAGCTTCAAGGGGATCGAAAAAAATATTTCTCCAACCATCTCAGGCCTGCACCCAATCTTTCTAGAATAAACCAGGGAGGGGTTCTGTTATGAATGGTCAGGGCCAAAATGCTCTGTATTTTGGTTAAACAGTATGATGCAGGGAATTACATCACTCAGCATGGCTTTCTCCTGTCAATTTTGAAAGGAATGTTTAACCATTTCTTCTTTGGGAACCGCTCTTTGGTTTTCTTTTCGTTTGAATCTTCATCTGCACTTCTGCATCCACCCGTGGGTTGGTCTTTCACTTTCTTTTCCTTTCTCTGACTGTTTTCCTCCTCACCTTTGGAAAATTTTGAAGGCGATTTAGCTTTACTCCTGCTTGAACTCCTCTTCAGTGGTGAATTGTTGGTATAGGACGCATGGATTTCATTCCTTTCCTTCAGAAGATTATCGATTGCTTGCATTTCTTGTGTGTATCTGCTGGTCATCTCAGTGAACTTTGCCAAAACTTCTCTGTACTCGGTCTCAAATTTGGATAGCTCTGCTCGTTTTGTGAGTATCTTTGCCTCAACACTCTGGAGCTTCTCCTTTTCAGCAGGGAAAGATTCACCACATACAACCTCTATAGTATAGTTCACACTTCTGAAGAAATTGTCACCATAGACAGCAAAGAAGTGTGTGCCTGGTTTTAGTTCATTTATATCACATGGTTGGAAGCTGTCCAATCTTTTAAAGAAGGCACTATCAGGATCCTTTGCAGCAGCTGCCAGGTTGTTTTGTTCAAAACGATACACAGGAAAGCCAAGAAAATACATCCCAGCAGAAGTAACCTTCCCAGTCTTTACACTGTCTTCCTGCAAAGCAAGGCTCAGGCCACCATTTTCTTCAAGCTCAAAGTAAAGCAACTTAAATTTGCTTCTATCAGTTGATTTCACACGACAAACTAACCCCATTTTAGCTTCCTTTTCTGTTATGTCAACAGAATAAAAATGAGCTGATTGCTTTTCCACCTTCCTGTGAACAGAGTTTCCAAGCTGGAGCTGAGAAACCATAACCGATCCATTCAATGCCTCCTCTAAAACTGTTGCTGATACGGTTGTCTTTATCGGCACACCAAGTTTGCTGAAAAGAGCAGCAAACACGGTGTTCACGGTATTGAGACTCGATAGGTCCAGCTCCAATTCCTGGCTATCGGCTTCGATGGCCTCAAATCCTGATGTGTCGTACTGCCGCCTCTTATCGGGATCTGACAGGATGTTGTAGGAGAATGTGACTTCCTGGAACATGTCTGATGCAACAGGATCATCGCCATTCTTGTCCGGGTGGTACTTGAGCGCCATGCGGCGGAAGGCGCTCTTGATCTCCTGGTCGGTGGCGTTGCGCCCCACGCCGAGCACCTCGTACGGGTCCCTCCTCTGCGCCGCCGTGGCGGCCGGGTCCCCCTTCTCCGACTTGAACGACCCGAACCTCGAACCCGCCATGGCCTCCGCCTCCTCCCTGACCTCTCCTCCGCCGCCGCGTCAACCCCTCCCGGCTCTTCACAGCAGCAACAGCAACAGCCGCGTCGCGCTCGGATCTCGCGCCGAGCGGTGGGGGGCGGCAGTGGCTGCTGCGCTGTTGCGGCCGGGGCAGTAGGCGCAGGCTCACCGCCCCCTCATCCCCGTCGCGGCGAAGACCTCCGCCCCTTCTGGCTCGCGCCGTAGCAGCGGAGGCGGAGGCGGAGTGGAAGGCAAGGGGAAGCCGCGCCCGCGCGGCGGTGGCGTGAGGTGGCGGCGCGACGCGACGCGGCGGCGAGCGAGGCCGGCGAAAATGGGAGGAGGGAGGCGTGGGAGTGAGGTGGTGGTGGTGGGGGGAAGAGGTGGCATAGTAGGTGTACCTCGTGGTGGGGCCGTGGGGCCCGCAGCTCAGTGGGTGTTGGTGTAGTGTGGGCCCCGTCAGTTGTAGCCATTCGCTGTACACGTGACAGCGGTTGGCCTGGCCTTGGCCTTGTGGCCTTGTGGGGGCACGCCTGTCAGTGATA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0336200.1 | 6 | 7161268 | T | C |
| Osa06LNT0336200.1 | 6 | 7160194 | G | C |
| Osa06LNT0336200.1 | 6 | 7160206 | A | G |
| Osa06LNT0336200.1 | 6 | 7160324 | T | C |
| Osa06LNT0336200.1 | 6 | 7161361 | T | C |
| Osa06LNT0336200.1 | 6 | 7162088 | T | C |
| Osa06LNT0336200.1 | 6 | 7162105 | T | G |
| Osa06LNT0336200.1 | 6 | 7163738 | C | T |
| Osa06LNT0336200.1 | 6 | 7163853 | G | A |
| Osa06LNT0336200.1 | 6 | 7164379 | A | C |
| Osa06LNT0336200.1 | 6 | 7164442 | T | G |
| Osa06LNT0336200.1 | 6 | 7160146 | G | C |
| Osa06LNT0336200.1 | 6 | 7161987 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0336200.1 | osa-miR7694-5p | Translation | 4.5 | 14.486 | 1 | 20 |
| Osa06LNT0336200.1 | osa-miR417 | Cleavage | 5.0 | 15.743 | 1 | 21 |
| Osa06LNT0336200.1 | osa-miR435 | Translation | 3.0 | 14.486 | 1 | 20 |
| Osa06LNT0336200.1 | osa-miR530-3p | Translation | 3.5 | 12.278 | 1 | 21 |
| Osa06LNT0336200.1 | osa-miR535-3p | Translation | 4.5 | 14.314 | 1 | 21 |
| Osa06LNT0336200.1 | osa-miR1440a | Cleavage | 5.0 | 23.945 | 1 | 20 |
| Osa06LNT0336200.1 | osa-miR1846a-5p | Cleavage | 3.5 | 15.383 | 1 | 21 |
| Osa06LNT0336200.1 | osa-miR1846b-5p | Cleavage | 3.5 | 15.383 | 1 | 21 |
| Osa06LNT0336200.1 | osa-miR1859 | Cleavage | 4.0 | 23.286 | 1 | 22 |
| Osa06LNT0336200.1 | osa-miR1846c-5p | Cleavage | 3.5 | 15.383 | 1 | 21 |
| Osa06LNT0336200.1 | osa-miR1862f | Translation | 4.5 | 14.312 | 1 | 20 |
| Osa06LNT0336200.1 | osa-miR1862f | Cleavage | 4.5 | 7.018 | 1 | 20 |
| Osa06LNT0336200.1 | osa-miR1862g | Translation | 4.5 | 14.312 | 1 | 20 |
| Osa06LNT0336200.1 | osa-miR5523 | Translation | 4.0 | 10.459 | 1 | 22 |
| Osa06LNT0336200.1 | osa-miR1862g | Cleavage | 4.5 | 7.018 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0336200.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0336200.1 | 6 | S5 | Physiological trait | Sterility | RG213 | C235 |
| Osa06LNT0336200.1 | 6 | nan | Resistance or Tolerance | Blast resistance | C1478 | R2171 |
| Osa06LNT0336200.1 | 6 | gp6 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0336200.1 | 6 | qRS6-1 | Morphological trait | Shoot/Seedling | RZ667 | RG424 |
| Osa06LNT0336200.1 | 6 | qGY6-1 | Morphological trait | Seed | RZ667 | RG424 |
| Osa06LNT0336200.1 | 6 | qLVBSL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0336200.1 | 6 | qLVBTL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0336200.1 | 6 | qSL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Osa06LNT0336200.1 | 6 | qTL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Osa06LNT0336200.1 | 6 | nan | Resistance or Tolerance | Lodging resistance | C1478 | R2171 |
| Osa06LNT0336200.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0336200.1 | 6 | nan | Morphological trait | Panicle/flower | RM276 | RM121 |
| Osa06LNT0336200.1 | 6 | nan | Physiological trait | Source activity | RM276 | RM121 |
| Osa06LNT0336200.1 | 6 | qHD-6-1 | Physiological trait | Flowering | RG424 | RZ667 |
| Osa06LNT0336200.1 | 6 | qPH2-6-1 | Morphological trait | Dwarf | RG424 | RZ667 |
| Osa06LNT0336200.1 | 6 | qTN2-6-1 | Morphological trait | Culm/leaf | RG424 | RZ667 |
| Osa06LNT0336200.1 | 6 | spf6 | Physiological trait | Sterility | RG213 | RM557 |
| Osa06LNT0336200.1 | 6 | qGT-6 | Physiological trait | Eating quality | RM276 | RM121 |
| Osa06LNT0336200.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0336200.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0336200.1 | 6 | qPSP-6 | Physiological trait | Flowering | R2171 | RZ144 |
| Osa06LNT0336200.1 | 6 | qPHw6-2 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0336200.1 | 6 | qSFWd6 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0336200.1 | 6 | sd6 | Morphological trait | Panicle/flower | RG138 | RG64 |
| Osa06LNT0336200.1 | 6 | sd6 | Morphological trait | Seed | RG138 | RG64 |
| Osa06LNT0336200.1 | 6 | tns6 | Morphological trait | Panicle/flower | RG138 | RG64 |
| Osa06LNT0336200.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0336200.1 | 6 | tns6 | Morphological trait | Seed | RG138 | RG64 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)