© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0336900.1
AGATAGAGATCGGGTTGATTCAACATGTGCACCATCCTGCAACATCCTAAACAATGGGAGACAGTCACTGTACACACATCAGCAAGTACATGATATTACTCATGAGGTAGTCACAAATGTTGTCAACAACAAGGAAGTCGGATACAGTGGCTGGAGTACACAGTGAACAAGCCTAATGCACAAACTCAATTCTTATGTAAGTAAAGAAATGCTATTATGGTTCCCTAGAAATAAGAACATACTAACTGGTTTTGTTTCTCAAATCATAGGTTGCTCATGGACCATCCTCTTCTTCTGTTTTCCCGGAGTTCCTTGAGGCACTTCTTTTTCTTTTGTTTTTGCAGGGACCTTAATGCACTTCTATGGTATATACTGTCACTTGAATTTTATTATTGCTGTACATTTTTCCCATTAATTTCTCATTTTTCCTATTGAATATAGGTTACGAAAGACTGCCTTTTGGTGAGCAGTACTTCCCTTTAATAATTTGCAGGAGTGCCCCTTGGAAATTGCATTTCCAACCAGTATTCCTGCTTTCCTTGTAGTGGTAAATCTTCAGCTATTTAGCACTTTCTATCTCCCAACCGCTGCCCTCAGAAGGGTACTTAGAACCGACGGGCAGCTTGCTATCACAAGCTTATAACCCTCTGTTGCCATAACAGCATCAAGATTTGCACGAGAAGAGATGATGAACTCGATGCACCTGTCCTTCAGCTGTGTACAGCTATGCTGCTCTGCGAAAGCCAAAGTTGTCGCAACAGTCTCCACATTGATGTCATCGTGGAGCCTATCTTGGCAGATCAGTTTGAGCCTGTCCAATCCATACCTGTCTGCAGCAACAAGCAAATGCTGTGTCATTGTTGTGATGTCCTGCTCCGAGTCACTGACGACATGCTGCTGATCAAGCTCCGGTGATGTACCAGTGTAAATGAAATGAAGCATGGCCTTGAAGACTGATGCCTCTATGTCCTTGATCTCCACACACTGTGAGCTACTCTCCTTCATGGGTCCAAAGAACTCAGCCATGAAGACAGGGGATCTAGCAGCGAGGATGATCTTGTGTGCCAAGAAAGATTCACCTGCAACAACAAACGTGACATCTGCCCCCTTTTCACTCAGCAAGAGTTCACCAAGGTGCATTTGCAAGTCACAGCATGGATTGGAAACATTTGGAGAAACATTAGTCACAGCTTCCTGTGGCTCTCTTAACACAGTGATGGTGCACTCCACAACAAAGGAATCCCCGATGAAATAATTGGATCCTGGCAAATCATCTTGTTTTACAAGCAGGAGCGCTGGCCCGCAATCTCGTTGCCCTGTATATTTAGAGGATACACTTTTACTTCCGGATGGCAGATAAATTTGTGCCTCATGTACTAACTGACATTTAAGAGCTGCCTTCACCTCATGCTTACATTCCTTGCTCATAAACATAAGTCGAAGTGCTATCCAGTACACACCATGCTCATAATAGCGTGGATAGTAAAGAACTTCCCAATCATATCCACCTGCAGCCAATCTCCTCGACGAGATATACTCTGAACAACCAAGTGCTCTGGTTACTGAATATCCATTGATTTTTAACAGGTGAACTGCAGATATTGTGTTGGTGAGATTTGTCGGGGTCTCCATGGTGATTGGTCAATAGCCACTGGAGAGTGGAGACTATTTGACTGTTTGTGCGAAGAGTTACAATTTACAAAATGAACTAGGAAGTTGTCTTGCACTAATAACCTAATAGCCTGCTGCAGGAGACGACTAATTCAGAAAATCTTTGCTCAAACACATAGCATGTTCTTCCTACCAACGGCGCGGCGTGGATCGACGAAGGCGGCGTCCGCGGCTGGACCCGGCCGCATCGGCGGCTTCGCCGCGGCGCCCCCCGGCTACGGCGGCGACGAGGGGGGAGAGGAGGAGGAGGAGGAGAAGCCCGTCAACGATGGAGAAAGTGAGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0336900.1 | 6 | 7844467 | A | G |
| Osa06LNT0336900.1 | 6 | 7842653 | C | T |
| Osa06LNT0336900.1 | 6 | 7843151 | A | G |
| Osa06LNT0336900.1 | 6 | 7843776 | A | G |
| Osa06LNT0336900.1 | 6 | 7844011 | T | C |
| Osa06LNT0336900.1 | 6 | 7844140 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0336900.1 | osa-miR6252 | Translation | 4.5 | 19.776 | 1 | 23 |
| Osa06LNT0336900.1 | osa-miR6255 | Cleavage | 3.0 | 7.081 | 1 | 22 |
| Osa06LNT0336900.1 | osa-miR6255 | Cleavage | 4.0 | 7.229 | 1 | 22 |
| Osa06LNT0336900.1 | osa-miR6255 | Translation | 5.0 | 13.8 | 1 | 22 |
| Osa06LNT0336900.1 | osa-miR395c | Cleavage | 5.0 | 12.091 | 1 | 21 |
| Osa06LNT0336900.1 | osa-miR395a | Cleavage | 5.0 | 12.091 | 1 | 21 |
| Osa06LNT0336900.1 | osa-miR395f | Translation | 4.5 | 22.914 | 1 | 21 |
| Osa06LNT0336900.1 | osa-miR167h-3p | Translation | 4.0 | 15.519 | 1 | 21 |
| Osa06LNT0336900.1 | osa-miR395o | Cleavage | 4.0 | 12.091 | 1 | 21 |
| Osa06LNT0336900.1 | osa-miR2864.2 | Cleavage | 3.5 | 16.877 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0336900.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0336900.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0336900.1 | 6 | qPSP-6 | Physiological trait | Flowering | R2171 | RZ144 |
| Osa06LNT0336900.1 | 6 | qSFWd6 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0336900.1 | 6 | qPHw6-2 | Resistance or Tolerance | Other soil stress tolerance | RG424 | RZ667 |
| Osa06LNT0336900.1 | 6 | sd6 | Morphological trait | Panicle/flower | RG138 | RG64 |
| Osa06LNT0336900.1 | 6 | gp6 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0336900.1 | 6 | tns6 | Morphological trait | Seed | RG138 | RG64 |
| Osa06LNT0336900.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0336900.1 | 6 | S5 | Physiological trait | Sterility | RG213 | C235 |
| Osa06LNT0336900.1 | 6 | nan | Resistance or Tolerance | Blast resistance | C1478 | R2171 |
| Osa06LNT0336900.1 | 6 | tns6 | Morphological trait | Panicle/flower | RG138 | RG64 |
| Osa06LNT0336900.1 | 6 | sd6 | Morphological trait | Seed | RG138 | RG64 |
| Osa06LNT0336900.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0336900.1 | 6 | qGY6-1 | Morphological trait | Seed | RZ667 | RG424 |
| Osa06LNT0336900.1 | 6 | qRS6-1 | Morphological trait | Shoot/Seedling | RZ667 | RG424 |
| Osa06LNT0336900.1 | 6 | nan | Resistance or Tolerance | Lodging resistance | C1478 | R2171 |
| Osa06LNT0336900.1 | 6 | qLVBSL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0336900.1 | 6 | qLVBTL6-1 | Morphological trait | Panicle/flower | RZ667 | RG424 |
| Osa06LNT0336900.1 | 6 | qSL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Osa06LNT0336900.1 | 6 | qTL6-1 | Morphological trait | Culm/leaf | RZ667 | RG424 |
| Osa06LNT0336900.1 | 6 | nan | Physiological trait | Eating quality | RM253 | RM162 |
| Osa06LNT0336900.1 | 6 | qTN2-6-1 | Morphological trait | Culm/leaf | RG424 | RZ667 |
| Osa06LNT0336900.1 | 6 | nan | Morphological trait | Culm/leaf | RM121 | RM136 |
| Osa06LNT0336900.1 | 6 | nan | Morphological trait | Panicle/flower | RM121 | RM136 |
| Osa06LNT0336900.1 | 6 | qHD-6-1 | Physiological trait | Flowering | RG424 | RZ667 |
| Osa06LNT0336900.1 | 6 | qPH2-6-1 | Morphological trait | Dwarf | RG424 | RZ667 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)