© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0031400.1
ACAGAAGAGCACATGTTCTGTTCTGATTTTTAATCTGATGGTAGATACAATGTTTGCCTAGAAATGACATTGTGAGTTTTTTTGTCGGTCCGCCTTATGATACAGATGGGGGCGAACTGAGTAATTTAAAATATTCTACACCGAAGAAAATGATCAATGTTATGGCTGTACAGTTTAGGAAGCTGAGTTACTCCCGGATCACAACAAAGTGAGCAACAAATACAGGTAGCAGAATGGTCTACCGTTTCTTATATACAAAATTGAGCTGAATATTTGTCGGAAGTAAATAACTAATAAGATTATTCCTGTTCGTTATCCACTTCTTCTTCCGGTTGACAAAGCTGTCGTCTTGCAGATGGGGCATAAATTCTTTACCATCAACCATTGTTTTATGCAATCTTCGTGGTACCTGTGGCCACAGTCAAGGGTTCCAATGCATTCTTTAACCTGATACTCTTCCTGGCATATTATGCAAGCATCATTCTCCATGGAAGATTCAGAAGACTTATTAGACATGCAGGATGATCCTGGCACAAATAAGCTAGTCTTCAATTTCTCTACAATGTAGCTTTTTGCCAGACCAGTATTTACATCTCCAATCTGCTCTTCTAATGCTAAAAGCTCCTCATATGTCATGCTGTCTATATCTAGCCGCATATCTCTATGCTCATCTACAACATTTGACACTTCATACAATCTTGAAAAATCCATTATTGTAGCATGCTCAGGTGGCAGGATTCGTATATTTCTGTGGTTCACTGGATTTGCCAAGAGTGGATGATGTGGAGGCCCAAAAGTACGTTCAGAATTAGAGAAAAGAACTGGAATCCTTGGACCCAAATGGAACCGGTTGCCAGAATGATTTACACCATGTAAGACAGGATTATTGTGGCATTGTTGGTAAGGAGCTTGCACTTGTGTATGATCAAGCAGATTATGAGCATGCATGCCAGCATGCTGATGAAAATAGGGTAAAGGCCCTCGACATAAGGTTGAAGGGCCATTCTGATATTCACGGAAGCTTCCATTCACTGTTTCTGTCATACCTGAACGGGAAAATCTGCCTGGAGCATTATTCATTCCATTGACATATTCCCACTGTGGTATTCCATCAGCAATACCATTTGCAGACTGGGAAATCCATGTATTGCTAGTAGGTTGAAAGCACTGGCTGATGTGACTAGTTGGAAATGCATAATTACCATGCTGTGCTGATTCTGGGTGAGCACCCATCAAATTAAAGCCATTACTGGGAATGGAAGATCCTTCCATAGATGGCCAACTGGTCTGGCTATGGTACTCTGATGGGTTATATGATGCAGTGTTAGGCAAAACATTTGACTCAAAAGAAGGATCCCATGGCCTATGTGTAGGATTCAGAGATGCATGAGAAGAGCTTGAACTTGCAAATCCATTAGCACAGTGGTAACTTCCTGCAACTGCAGCATTTTTCCTTTTAATGAATCCTCTAGCACTTTCACCAGCATTTTCATTTCTGCTACCTTCATCCATGCTTCCTAGAACAACTTGGTTTGATGGCAATCCGAAGCTCTGAGTGTGAGAAACATATTGGTTCATAGATGTTGTCGACATGCAGGGGTTGTACATACTGGATGGGAAGACAAAACCTGAATCAACTCCTAAATTTGGAGGCAAGTTATGAACAGGTTGATGTGGATGGTTCATGCCCGCATCATAGTAACTTCGCATATCAGATAGACCAATGTTTGTAGCATTTCCTACCCCTCGTATTTCTATATGCCATAACGCCAATTATTATTTGTCTTAGCTGCAAGAAAGAACTGCTGCAAGCTAAGTCACTAACTATGATTTATCATCACCTCTACCTCGGGGGGAGCACGCGATCCGATCGGCGGAAGCGGGGTGGGTGGGTGGAGTGGAGGATCCGCCGCCAGCCGCGTCGTGGTGGTCGGGGAGCGGAGCGGAGCTATAGCGGCCTCGCCTCGCCTCGCCTCTCGGGGAATCGCGCGGGAAGGTGGAGGTGGATGGGTGGGTGGAGCGATCGCCCGCCGCGACGGGACGAGCTCGCGGGGGGCGATCGGCGGGTGGGGGGTGGAGGTGGAGGAAGGGGATCGGGGGAGAGGGGAGGAGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0031400.1 | 1 | 27303286 | A | C |
| Osa01LNT0031400.1 | 1 | 27303740 | T | G |
| Osa01LNT0031400.1 | 1 | 27305233 | G | A |
| Osa01LNT0031400.1 | 1 | 27305575 | A | G |
| Osa01LNT0031400.1 | 1 | 27305823 | A | G |
| Osa01LNT0031400.1 | 1 | 27307136 | A | C |
| Osa01LNT0031400.1 | 1 | 27308837 | A | T |
| Osa01LNT0031400.1 | 1 | 27309569 | A | C |
| Osa01LNT0031400.1 | 1 | 27309798 | G | A |
| Osa01LNT0031400.1 | 1 | 27310149 | T | C |
| Osa01LNT0031400.1 | 1 | 27310524 | A | G |
| Osa01LNT0031400.1 | 1 | 27311555 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0031400.1 | osa-miR319a-5p | Translation | 5.0 | 19.342 | 1 | 21 |
| Osa01LNT0031400.1 | osa-miR319a-3p.2-3p | Translation | 4.5 | 16.46 | 1 | 20 |
| Osa01LNT0031400.1 | osa-miR319b | Translation | 4.5 | 16.46 | 1 | 20 |
| Osa01LNT0031400.1 | osa-miR439a | Translation | 4.5 | 12.626 | 1 | 21 |
| Osa01LNT0031400.1 | osa-miR439b | Translation | 4.5 | 12.626 | 1 | 21 |
| Osa01LNT0031400.1 | osa-miR439c | Translation | 4.5 | 12.626 | 1 | 21 |
| Osa01LNT0031400.1 | osa-miR439d | Translation | 4.5 | 12.626 | 1 | 21 |
| Osa01LNT0031400.1 | osa-miR439e | Translation | 4.5 | 12.626 | 1 | 21 |
| Osa01LNT0031400.1 | osa-miR439f | Translation | 4.5 | 12.626 | 1 | 21 |
| Osa01LNT0031400.1 | osa-miR439g | Translation | 4.5 | 12.626 | 1 | 21 |
| Osa01LNT0031400.1 | osa-miR439h | Translation | 4.5 | 12.626 | 1 | 21 |
| Osa01LNT0031400.1 | osa-miR439i | Translation | 4.5 | 12.626 | 1 | 21 |
| Osa01LNT0031400.1 | osa-miR1874-5p | Cleavage | 4.5 | 18.335 | 1 | 24 |
| Osa01LNT0031400.1 | osa-miR2097-5p | Translation | 4.5 | 13.433 | 1 | 22 |
| Osa01LNT0031400.1 | osa-miR2864.2 | Cleavage | 4.5 | 19.125 | 1 | 21 |
| Osa01LNT0031400.1 | osa-miR2868 | Cleavage | 4.0 | 13.151 | 1 | 20 |
| Osa01LNT0031400.1 | osa-miR5151 | Cleavage | 5.0 | 21.105 | 1 | 22 |
| Osa01LNT0031400.1 | osa-miR5076 | Cleavage | 4.5 | 17.167 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0031400.1 | 1 | QPh1b | Resistance or Tolerance | Submergency tolerance | RZ527 | RZ154 |
| Osa01LNT0031400.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0031400.1 | 1 | nan | Morphological trait | Seed | CDO118 | CDO455 |
| Osa01LNT0031400.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0031400.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0031400.1 | 1 | yld1.1 | Physiological trait | Source activity | RM5 | RG462 |
| Osa01LNT0031400.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0031400.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)