>Osa06LNT0351200.1

CACTCCAAATTTTGCAACACGGATTATCACCTTTCAGTAAGTTACACACATGCATAACACAATATTCAACTATTCATAACTATTGTTCACAAATGCATTCTGACATATCATCATGTAACTATTGTTCACCCATCAAGTAGCAGTATTCCTATATAGCAGTTATCCATCAGCTCAAATAGCTATTACATAAGAGTTCAAGTACATAGCAATAATTACATAATTTAGATGTAACTAAGGTTCTTGTAGGTGTATTGAGGTCCCAAAAACAAAACAAATCATCTCTTTTATGGTTCTTGTAGGTTCTTGATTTTTTTTACAGCACCTCTGCTAGCCCTTTTTATGGTTGCCTGCTCGCTGGTTAGTCTTTGCTGTCTTCTTGTGTACCTTCTTTTGTAGCTGTACATTATTAACACCTGGAACATTTTCTTCACCAGCTAAGGGCATATTTCGAGGATCATTAGCATCAACACCTCCATTTTCTGCATTTGTTCGTGTCCTAGGCTATAATATTGGACCTCCAACTACTACTCCATCTGTCCCTGAGTTGTCTCGTCGGCGACCGCGTCGAATGTCGTCCTGCCCCTGGACCTGCGCACGCACAAGTCCGACGCCCTCGCTTCCTCCTCCTCCTCTACCCGGCACACACCACCACCTGGGCGGGCGCGAGGTCGACTCCGGCAGCGCGGTGGATGGGGAGAGAGGAGCGAGGTGGCGGCACGCCGCGGCGGAGGAGGAGGCCGCGCGCCGCGGCGGTGGATTTGGCGGAGGAGGCGGTGCGCGGTGGAAGGGGGAGAAATGGCGGCGCGCGGTGCGAGCCT

Explanation	CPC Score
noncoding	-1.16272

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa06LNT0351200.1	osa-miR5536	Translation	4.0	11.22	1	22
Osa06LNT0351200.1	osa-miR5834	Cleavage	3.5	11.69	1	21
Osa06LNT0351200.1	osa-miR6247	Cleavage	4.5	10.52	1	21
Osa06LNT0351200.1	osa-miR426	Translation	4.5	16.134	1	21
Osa06LNT0351200.1	osa-miR528-5p	Translation	3.5	15.981	1	21
Osa06LNT0351200.1	osa-miR1869	Cleavage	4.5	9.59	1	24
Osa06LNT0351200.1	osa-miR2921	Translation	5.0	9.736	1	24

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa06LNT0351200.1	6	nan	Morphological trait	Root	RM4447	RM5509
Osa06LNT0351200.1	6	ph6	Morphological trait	Dwarf	RZ667	RG653
Osa06LNT0351200.1	6	qLDLJ-6-1,2,3	Physiological trait	Source activity	RM217	RM3
Osa06LNT0351200.1	6	prt6.1	Resistance or Tolerance	Drought tolerance	R2549	RG716
Osa06LNT0351200.1	6	gw6	Morphological trait	Panicle/flower	RG424	R2549
Osa06LNT0351200.1	6	RPLD4	Physiological trait	Eating quality	RG424	RG172
Osa06LNT0351200.1	6	nan	Physiological trait	Eating quality	RM253	RM162
Osa06LNT0351200.1	6	amy6-1	Physiological trait	Eating quality	RM3	RM217
Osa06LNT0351200.1	6	asv6-1	Physiological trait	Eating quality	RM3	RM217
Osa06LNT0351200.1	6	tgw6.1	Physiological trait	Source activity	RG264	RM3

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus