© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0352900.1
CTGAAAAAATGATCTAGATAATAGTTCATTGAAATAACTTCTACCAGTTTCTCTCATACTTTCATATGTGCCTATATGACCATGAACAAATTTATGGGCTATCCACATATTCACCAACAAGTCAGGCTCAAGAGAATAGCCTTTGGGGAACAGGCTGCAAAAAGTAAAACATTGCTGGAGGTGACCTGGCAAGCATTCATAGCTCAGACGCAAAATTTGCATAATGTCTTCCTTGTTTGATGAACTACTTTTCATAACTCGTGTCCACTCTTCAACGTTGAGGTTAGCATTCAAATGTGCACCAACAACCTTTATGACTAATGCTGAGCCATTCAACTTTTGGACAATACATTCACCGATAGACTCTAGTTCTGGATAATTTCCTGGATCTTCAGCGCCAAATGCGCAGATCCTGAAGAGGTTCCAACTATCTTCACCCTTCAGACCCTCCAAATGGAATGGTGCTGGGCAACCCAAAATCCTTGAAACAATATTTGTTCGAGCAGTAACAAGAATTTTGCTTCCTTTAGCTCCATAGCATAGAGGAGCAAACAATTCTCTCCATCTATCAGCATTTGTAAGCTCACCAATCTTTTCATCATACCACACATCATCTAGCACAAGTAGAAACTTCTTTGCTGTTAACTTGTTCTTAAGATCTTCCTGGAGCATGTTAAAACTGAAATTTGTTATATCACTGTTTCTATCAATTGATTTCAAAATCTCTTTGGTGATTTTGACCTTATTGAAGATATTTGAAACATATATCCATGTCCTCAGATCAAAACCACTGACTATTCTTCTGTCATTGTAAATAAGCTGAGCTAATGCAGTTTTCCCAATGCCACCACTGCCAACTATGGTAATTATAGATGGTGTTGGTGATATTGTTAGTCCTCTGCTTGGCTCTGGTCCATCAGCTTCTCTCAGAAGTCGGTGCACTAGATCATCCTGCTCATTTTGTCGGCCAATGATAATTTGGCCAGGAGAAATTGAGCTGGTGACACGCCATTGAAGTGGCTGAGGAGGCATATATGAATTAGAGTTTTCAGCCCCAATCACTTTGATGAGCATGTCAGCACATTCTTTTACTCTAATCAGGCTATTGAGGACCCTCCTTAACTTGGATCTGAACTTGTCTTGGCCAACCAAACGCTTTCCTATGGCAAGAGAACTGGAGGCCAAGCTACTTAGCTTGCTCTTCTGCTGAGCATTTGCCTTCAGAATCAGGTAATCAAATTCATCCATGACGTCGTCGGCATCATAGGCAGAATCTTTCATTTTGGCAAAGTAGAGCTTCTTGGTTGCAATCTAGCATTTGCGACCTTTCAGCAGCACCCAGCACCAATTGGATTTTTATCAAAGTGGATTCGATCTTTTTTAGATCATCCTCCAAGTCAGATTGCCACTTGTACTGGGTTGATGTATAAGATTGGACCTTCTCAAAGATAAGCTTGATGATAGGACAAACTACCCACCCAATGCCGGTGGCTATTGGTAGTGTAGCCATGTTGGTCAATGTACAAACCTATTTCCCTTTTTTTCAAAATATACTGTTTTCTTCAAATGACCATTACAGCTTGAAACTCAATAATCCATTCACCTGACTAGTAGTAAGATCAGAACTGCAGCTCACTCCTAGAAGAAGAGGCCCTTGATCTTTCTTCTTGCTGATCAAATGCAAGGCTGCTTTCAGAGAGAAACTAGGAGGAGAGCCAGATTCAAACAGAGGGAAATGGGAGTAAACCACAAATGGATGTGCAAGAAAGTTGACTTCCACCTCTTCAAACAAAGAAAAAAGGAGAGGTTTTTTCAACTTTGAGTAAAGAATTACTCCGTATCTTGTATGCATCCCACGTTCTCACACAAACAACAGCTGGAGGGCTTTATTAGCCGGGTTGACCAAAGAGACGACCAACCAAATCTTATAACAGCTGGAGAGCGGAGGTAGGTACACTCCACCTAGCAGAATAGGTGGAATCACCGTGAAATTCCAGCGGTTTGGCTTCCGATGCATCAAAGCAGGCAGTGGCAGTCGGTCTGTGGAGAAAGTTTTACTAACAAATTGTTCCGTATGAGATGCCAAGAAAATAATATACAGACTGTTTTGCCACTTAGAGTCTTGAGGAAGGGGAGGAGTTTAGATGAAAGTGTTGGTGTGGGATTAAAGTCTATCTTCTATTACCAATCCTAGCTCTGTGTGTAATGCTGATTGCGTTTTACCAAGCAACTACAATATAAAATATCTGGTTGGTTATAAAAAAATTAGCTTGGATGTAGTATCATAAGGAGCTAAGATCTACTCATCTCTCTGCTTTAAAAAAAAAGGATTTCTCTCCTGTATTGAAATGATGGTGTTGATCCCTTATATTTTCCATCCCTGTTGAATTCCTACATCCATCAACAGACAAGAAAAAAAATGGTATTGAAATGATGGTGTATCAATCCCTTATATTTTCCATCCCTGTTAAATTCCTACATCCATCCACTGACAAGAAAAAAAAATGTTAATAATAACATCAAACCCGCTCAACTCCTATTAGTTTCATTCCCTCTCAATAATCCACTAATCCACTAATCATTCCCTTAGGACAACACATGATTGACTTCACCGATGTGCGACATTTAAAAACTCTACGGAGACTTTACCCTAAGATTAAGAAAAAGCGTTACCAGGGCGGGCCAGCCGGCTCTGCAAAACGAGGCGGTGGCGGCGGCACGGCGGAGCCGAGCGGCGCCAAACAAGCCATTGGTCTGGGGGACATACTTCCACCGTGTGCAGCCACAAGCGCGCTCTCACCTCGCGCCACCACCCAATCGGTGAATTGGGAGGCGCCGCCATCGCCGCCGCCGCCTTCTTCCCTTTCGGCGGTGCAGCGCTCCCGGATCTCGGTTCGCGAGGGGAGGCCATGGGCGAACCCGCCGGTGGAATTCCCCAGCCTGCGCCGGCCGCGACGGAGGCGTTCGCCGGCCGCCGGTGGCCGCGGGCGATGAAATC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0352900.1 | 6 | 24975121 | T | C |
| Osa06LNT0352900.1 | 6 | 24975205 | A | T |
| Osa06LNT0352900.1 | 6 | 24976602 | G | A |
| Osa06LNT0352900.1 | 6 | 24977978 | A | G |
| Osa06LNT0352900.1 | 6 | 24978027 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0352900.1 | osa-miR435 | Translation | 4.0 | 13.233 | 1 | 20 |
| Osa06LNT0352900.1 | osa-miR1876 | Cleavage | 4.5 | 7.016 | 1 | 24 |
| Osa06LNT0352900.1 | osa-miR1882a | Translation | 5.0 | 17.384 | 1 | 24 |
| Osa06LNT0352900.1 | osa-miR1882b | Translation | 5.0 | 17.384 | 1 | 24 |
| Osa06LNT0352900.1 | osa-miR1882c | Translation | 5.0 | 17.384 | 1 | 24 |
| Osa06LNT0352900.1 | osa-miR1882d | Translation | 5.0 | 17.384 | 1 | 24 |
| Osa06LNT0352900.1 | osa-miR1882e-5p | Translation | 5.0 | 17.384 | 1 | 24 |
| Osa06LNT0352900.1 | osa-miR1882f | Translation | 5.0 | 17.384 | 1 | 24 |
| Osa06LNT0352900.1 | osa-miR1882g | Translation | 5.0 | 17.384 | 1 | 24 |
| Osa06LNT0352900.1 | osa-miR1882h | Translation | 5.0 | 17.384 | 1 | 24 |
| Osa06LNT0352900.1 | osa-miR2275a | Translation | 4.5 | 17.016 | 1 | 22 |
| Osa06LNT0352900.1 | osa-miR2275b | Translation | 4.5 | 17.016 | 1 | 22 |
| Osa06LNT0352900.1 | osa-miR5073 | Translation | 4.0 | 21.852 | 1 | 23 |
| Osa06LNT0352900.1 | osa-miR5340 | Cleavage | 3.0 | 16.518 | 1 | 23 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0352900.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0352900.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0352900.1 | 6 | prt6.1 | Resistance or Tolerance | Drought tolerance | R2549 | RG716 |
| Osa06LNT0352900.1 | 6 | gw6 | Morphological trait | Panicle/flower | RG424 | R2549 |
| Osa06LNT0352900.1 | 6 | qGL-6 | Morphological trait | Seed | R674 | R2549 |
| Osa06LNT0352900.1 | 6 | RPLD4 | Physiological trait | Eating quality | RG424 | RG172 |
| Osa06LNT0352900.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0352900.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0352900.1 | 6 | qDLR6-2 | Resistance or Tolerance | Other soil stress tolerance | RM1340 | RM5957 |
| Osa06LNT0352900.1 | 6 | ostd(t) | Physiological trait | Sterility | nan | nan |
| Osa06LNT0352900.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0352900.1 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)