© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0354100.1
GAAGTTTTCAGTCTGGAAGAGGTGCAACTGCATGAGTAAGAAGTACTGATTTAACAGTTGAGCACTCTATGGGTGAAGAAGATTAATCCAGAGTTTAACTATAGTGTACAATGCTTTCCTGCTGGGAACTCACCATCTGAAACATCTGTACAAAGATACAACCATGCAGCTATCCATCAGCTCGGCAATTACAAATTGAAGTATGGTGCAAAAAAGGGGGACCCATGTTCTCTACCACTCCAGTTGCAAGCCTCCCCAAAACCATATGAGCCCTACCGTTCTCCCGCTAGGAGGCCAGGCTCAGAAGCCTCCTAAATATATTATCCTTGATCAATCTTTGTAAATAAGAGATACAACACCACCACATGCTTGATCTGCATGTAAGGAAGATTTTGATTTTTTTTTCTCCACTCCTGTTACTCCCACATTATAACAATACTCATCATATAACTTTGAGAAGGCCGCATAACTAGAAGAGCTAATTCACAAGAATATATACTGGTTTTTCTATCTGTCCAATAACCAATTAAGCACCGTCTTTTTTGGCACGGTTCCATCACTACCTTCTTTCTCCGTCTTCACAGCAGTATTTACAGCATTACGGATGAGAGAATTCAAGCGCAACCTCAGTTGTGCATTGTCAATAAGCAGATCAGATAACATTTTTGTTGTCTCTTCATCAGTAACATATGCATCTTCACTGCTCATGGTAACTGAGGATTTACCATCAGAATTATCACCATCATCAGAAGAGCCCTGTTCATCATCTCGTGACAGAAGTTGAGCCTCAGCAACAAGCAAACGTATTCTATTGTCTGATGTCGTCACAAGATCTAAAGCATCAGGCAAAGATGATAAATCAATAGTCATAGTGTCTTGCTCATCTGCAACAAACTTGGCAGTACATTCCTGTAGACGCTCACGGAGCAGTCTGCATTCGTGAAGAATTTTTTCACGGGAGAACCTTGCACGTGTTGACCGCTGTTTCTCCCTGTTAACAATCCTCTCTAATTCAGTCTTCTCCTCATGATACTGATTCAGCACTTTCTTCATCTCTTTTTGGGAGTTCCGAAGAGATTTCACCTCTTTAACAAGAACTTTTATATCTGCTTTAGACTTTGCCTCGAATTCTCCAATATGTTGCTGCAAACTCTCAACTTCTTTTCGTTTAGTTTCTAGCTCTTCCAGTAACATTTCTTTTTCACCGCTAGCAGTTGTTTTCTCTGACTGCACACGAGTTTTCTCATTTTGTTCAATCTTCAGGTTTGACTCCATTTCAGAGTACTTCCTGTAGAGCTCATCCTTATCCCATTGAAGTTGGGTAATTTTCTCTCTTTCGGTCAAAACAGCCTGATGTAGAATCTCTTTGTCTTTTTTCTTCGTAGCTTCCAACTCAACCTCCAAATCTTTGACCTTTGTCGCAAGATATTCTTTGACAGCCACTTCCTGATTTAGTCGTGCTATGAGATCCTCCATATCAGTTTTTGCTGTCACCTGTCTTCTGTCCATGCTGATCAAAAGTCTAGTCAACTTCGGCCTTTGATCAGCAGGAAGGATGATTTGTGCATCCATATCATATAAAAGCTGCATATCTAAACCTGTAAATTGTTCTGTTTGGCTATGTCCATCAATTCCACTTGGAAGATCCACAGGACCATCCCAAAGGGAACTACTAACTCCAGGAACCGATAATTCACTGCCCCTCAAAGAACTCAAATCACTTCCTATACTTTCAGCAGAGTCCTTCCTGGCATGGCCAGGGTTAGAATCGTGATCCTCTTCGGAAACCACTCCCTTATAAGTATCTATGGAACCATTCCTAACACCATGTTCCAAAAAGACATGGTTCTTTTTCCTGTGATTTGACATGCTACTAGCCCGCTCATTGGGCTGATCTAAGATAGACTCTCCCAGCATACCATTACCAGTTGCTCCTGTCGGACCGTTACCATGAGCAAAGGCTGAATTCATTTGACTGGACTCAGAGAGAACACCTGAACCATGTTCATCAGGACGCGGAGAAGAATCTGCACTACTTTTTGCTGAAGAACCCACTTCAGAAGGGCGCTGATTCCAATCTTGGTAATATGAGCGTGCAGCAGCTTCCAGCTCAAGAAAAGCAGCAACAGGTGCACTTCTCGACAACTCAATGTCAGAAAGTAGCTTTTGCATCCACTCCTCCAAAGCGTTCCTTCTCTCTTCTAGAAGCACCCTGCTTGAATTTATTCTTGAAAAGGCATGCTTCGGTGGAGCAGGGGGGATTCCTTTTCTGGGAAATTCCTGCTTAAGATCAGAAGATAACTTTAGAAAGTCACTAAACCTTCGAAGAACTCCGTGGCTAGAGCTGATGCCTTCTGGAGATTGTATACCAACATGTATCCTGTAAAACTGTCAACTATGGATTTCAAGAAGTTGTCAGCAGTCGCACTAGCTTCAGGTGTCTGAGCGATCCAAGAAGGAATCATCACACAGTAACTCCATCCGGTTTGAGGGTTATGTGGCCATATGGTGTTCCTTCCCTCCTGCAGATCAATAAGCATAAGCCGTAAGAAGCATCAAGCAATGGAACTTTTCATGGTATCCTATTGATATGGCATCATCTTTCCAGCGAAACCTAGATTGAGAAGTTATGTGGTCTTCATGGAAGTACATTTTCTTTAATACAAGGAAACATCTTCAAGGAACTTTCCCAGTTGTTTGAAAATTACTGAATTTTGTTAACGAGGCATGTGATTTACTTGACGGTGAAAAAGAATTGACTAGGACTAGTAGGTTAATCTTCATTTGCGTTCTAGGATCATTTCATGTTAAATGTGGTAAAGATGTTGGGAAACACACCAAGTGCAAAGAATGAGGCTAGCACAAGGCAGGCAGGTCAAACAAAAGAGCTAATCTTCACAATGGGAACAATGATGAATAATAAAATCACCATCAGCCTGCTCAAATATGTATACGAAATCAATTATTGTACTTATGGCCTTATGCGTAACAGTATGAACATGCCTAATTGCCTAATATAGAAATCCAAAGCCCTTATGTCCGATGGACTCAGACAAAACCAGAGTCTTTGAAATAAGCAGCACATATACAACCAAATCAATCCGCATATCATGAAGCTGAACTGCACTCGGTTTGTCTAAACCCATCCCCGCAGAAGTAGTCCTACCTGAAACCCATACTCGACTCCTTGCAAAAGAAACAGGAATTCAAAACCCTATCCAGGGGAAAGCTCTAAAACAACTCTGAAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0354100.1 | 6 | 26191522 | T | C |
| Osa06LNT0354100.1 | 6 | 26191419 | A | T |
| Osa06LNT0354100.1 | 6 | 26191681 | A | G |
| Osa06LNT0354100.1 | 6 | 26192146 | C | T |
| Osa06LNT0354100.1 | 6 | 26193844 | A | G |
| Osa06LNT0354100.1 | 6 | 26193958 | C | T |
| Osa06LNT0354100.1 | 6 | 26194397 | A | G |
| Osa06LNT0354100.1 | 6 | 26194912 | A | G |
| Osa06LNT0354100.1 | 6 | 26195334 | A | G |
| Osa06LNT0354100.1 | 6 | 26197073 | A | C |
| Osa06LNT0354100.1 | 6 | 26191893 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0354100.1 | osa-miR5820 | Cleavage | 3.0 | 9.137 | 1 | 21 |
| Osa06LNT0354100.1 | osa-miR2873c | Cleavage | 4.5 | 21.937 | 1 | 21 |
| Osa06LNT0354100.1 | osa-miR2873c | Translation | 5.0 | 13.626 | 1 | 21 |
| Osa06LNT0354100.1 | osa-miR1437b-5p | Cleavage | 5.0 | 16.275 | 1 | 21 |
| Osa06LNT0354100.1 | osa-miR166c-5p | Cleavage | 4.0 | 22.335 | 1 | 20 |
| Osa06LNT0354100.1 | osa-miR171a | Cleavage | 4.0 | 17.115 | 1 | 21 |
| Osa06LNT0354100.1 | osa-miR164c | Translation | 4.5 | 17.246 | 1 | 21 |
| Osa06LNT0354100.1 | osa-miR171b | Cleavage | 3.0 | 17.115 | 1 | 21 |
| Osa06LNT0354100.1 | osa-miR171c-3p | Cleavage | 3.0 | 17.115 | 1 | 21 |
| Osa06LNT0354100.1 | osa-miR171d-3p | Cleavage | 3.0 | 17.115 | 1 | 21 |
| Osa06LNT0354100.1 | osa-miR171e-3p | Cleavage | 3.0 | 17.115 | 1 | 21 |
| Osa06LNT0354100.1 | osa-miR171f-3p | Cleavage | 3.0 | 17.115 | 1 | 21 |
| Osa06LNT0354100.1 | osa-miR1854-5p | Cleavage | 5.0 | 14.486 | 1 | 21 |
| Osa06LNT0354100.1 | osa-miR1864 | Cleavage | 5.0 | 12.584 | 1 | 24 |
| Osa06LNT0354100.1 | osa-miR1882e-3p | Translation | 3.5 | 16.492 | 1 | 24 |
| Osa06LNT0354100.1 | osa-miR2055 | Cleavage | 4.5 | 14.505 | 1 | 21 |
| Osa06LNT0354100.1 | osa-miR2872 | Translation | 4.5 | 20.146 | 1 | 21 |
| Osa06LNT0354100.1 | osa-miR5489 | Cleavage | 4.0 | 16.764 | 1 | 21 |
| Osa06LNT0354100.1 | osa-miR5490 | Cleavage | 4.5 | 10.469 | 1 | 21 |
| Osa06LNT0354100.1 | osa-miR2275c | Cleavage | 4.5 | 12.755 | 1 | 23 |
| Osa06LNT0354100.1 | osa-miR1861c | Cleavage | 5.0 | 16.362 | 1 | 22 |
| Osa06LNT0354100.1 | osa-miR1857-5p | Cleavage | 4.5 | 16.76 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0354100.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0354100.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0354100.1 | 6 | qREP-6 | Resistance or Tolerance | Other soil stress tolerance | nan | nan |
| Osa06LNT0354100.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0354100.1 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Osa06LNT0354100.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0354100.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)