© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0356600.1
AAAACCGAGAAAATAATATAAAAAATCCTCATCCATCTCCTCTCCACTCCCAGTTGCGGTGTTTCTCACTCTCTCTCCCCCATAGCCTGTCCTCAAAGAACCGGTGAGGACCTCTCCTCCCATGCGCCGATGGAGTTGTACTCTCCTCCTTCCCTGTCGTGGCACCCTCGGACCCTCCTCGCCGCTATCCCTTATTCCTTGTTGCAGAATTGGTGAGGAGCTCAGCACACCCTCTCTTTGCTGCCATCTCTTTCACGAGTTAATGGAGAAGAAGCTCTATGACGACATGTGGGAACGAGGGAGGAGCTAGGTGGTGGTGGCAAGCTCAACCTCGGCAGAGATTGGGATCCGACATCGACGGTGCGTCTGGTAGATCAAGTCGGCCCCTCTTCTCCTCCCTCATCGGCGAGCAAAGATTGAACAGCAATCTCAATGGTGCAGATCAAGGCAGCGCCACCTGGCAATGAGCAAATCAAGGTGAGCAGCATCCGCAGATGTAGTGATGAACTCGACGGTGTCCGTGGTGGTAGTGTCCTCTTCTCTTCCTTCCCACCGCACTTGTTATCTTCTTCAACCTCATCCATCGCACCACCACCTTTTGTCAAATCTAGCCTAGTTAACACGCAGGGGCATGCGTCACGAGGCCACGGCCTTGCCCAACATGTAACGACTCGTGATCCGTACTTCGAGCGTGGTTGCCTCAGCCCTGCAACTCAACCGTGCCCTCTATGGGGCACGATTGCAACCAAGCTGGTGAGCCACCTGGCTCCAATGGGGCCTAGCGAAGCCACTCGCCACATCCCTGCCAAAAGAATCGCCGCCGTCGTCGTCACGATTCCGCCGCCGTCGCCGCCGCCGCATCCACCGCGTTCTGGTCAATGAAGTTGACCAGCGCGAGGCCGGCGGCCCAGACGTCGTCGTCCATCACGGACTCCTCCGGCGAGTGGCTCACGCCGCCGCGGCACCGCACGAACAGCATCCCCACCTTCGTCAGCCTCGCCATCGCCATCGCGTCGTGCCCCGCTCCGCTCATCAGCACCGGCGTCTCGCCGCCGGCCCGGCGCACGCCCGCCGCCATCGACGAGATCGTCGACCGCGTCGCGCGCTCCAGCCGCGACGTCAGCTCCGCGTCGCACGGCGTCGCCGCCGCCGCGTGCTTCTGCTCGACGGCGCAGTCGACCAATCTGTCGTCGCATCTCTGAAGAACAAGCCTCGAGAAGCTGGTGACGATCGTCTCCCTCACCTTGTCGTCCATGGCGCGTATGTCCACCGTGAAGTTCACCTGGCCTGGTATGACGTTGCTGGCGCTGGGCCATGTCAGGAGCTCGCCGACGGTGCAGACGAGTCCGGCGAGGGATTCCTCAGTGAAGCAGCCGCATTCCTCGTCGTAGGTGAGGAACTTGTTGGGTTCTTTGCAGAGCGTCTCCAGTGTCAGGACGAGCTCTGCAGCTGCAACCATCGGATCACGGCGCAATTTCATTGGAACCGTGCCAGCATGCCCTTGTGAACCATTTATAATTACCTTTAATCGCGTCTGTCCTGCAATTCCTTTTACAACACCAAGCGGATAACGAAGGGCTTCCAGGACAGGCCCTTGTTCAATGTGAACCTCGACATAACTCCCGACAGACTCCGGGCTGTACCTTACTTCACCAAGAGCATTAGCAGTGCCCTCAAGAGAATTCAGCTTTAGGACATCTTGAACTGTCGTGCCACTCTTGTCAGATACTTGTAAAATTGATTCAGGTAGTGTACCAGCTACAGCGGCGCTTCCCAGAAAAGTTGTTTGGAATCTAACACCCTCCTCATCGCTGAATGCAATCACCTCTACTGGTCTAGTAAGTCTCTGAAGTCTCCCAGTAACTTTCAAAACCTTCAAAGCAGAGATTGCAGAGATAATACCCAAAGCTCCGTCATACATGCCAGCATCAATAACAGTGTCCATGTGAGATCCGATCAACAAGGCCTCCTTGGTTGAGTTGGTCGGTTCAAATCGACCATGAATATTCCCCATTTGATCAATCCACGTGGTAAGTCCGGCATCTTTCATCCAGCTGATAATGACAGCAGAGGCTCTGATTGAGGCAGGACTCAAAAATGTCCTCTCAAGGTAACCTTCCCCATCAGATATCTTGCCAAGTTCTTTGAGCCTGAGCACCGTCTCATCCCTGAGGATCTCCCTGTAGAGCCCATCTCCTCCCAGCTCCAATCCATCCAAGATTGGGAGGAGGAAGAGGGCGTAGGCGGAGAGGATGAGGAGGTGGATGGATGGGTGGCGCCTGGGGTAGGAGAGGAGGAGAGCCATGGCCACTTTTGTGTTGTGCTTGTGTGTGTGTGGCCTCTCTGGCTCTTCCCTTCCCACAGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0356600.1 | 6 | 27499163 | G | A |
| Osa06LNT0356600.1 | 6 | 27495217 | A | G |
| Osa06LNT0356600.1 | 6 | 27493546 | A | G |
| Osa06LNT0356600.1 | 6 | 27494011 | T | A |
| Osa06LNT0356600.1 | 6 | 27494648 | T | C |
| Osa06LNT0356600.1 | 6 | 27495157 | G | A |
| Osa06LNT0356600.1 | 6 | 27495166 | G | A |
| Osa06LNT0356600.1 | 6 | 27495256 | C | A |
| Osa06LNT0356600.1 | 6 | 27495564 | A | G |
| Osa06LNT0356600.1 | 6 | 27495730 | T | G |
| Osa06LNT0356600.1 | 6 | 27496372 | A | C |
| Osa06LNT0356600.1 | 6 | 27496858 | C | T |
| Osa06LNT0356600.1 | 6 | 27498951 | G | A |
| Osa06LNT0356600.1 | 6 | 27499072 | G | A |
| Osa06LNT0356600.1 | 6 | 27497957 | G | A |
| Osa06LNT0356600.1 | 6 | 27494718 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0356600.1 | osa-miR5822 | Translation | 5.0 | 20.302 | 1 | 21 |
| Osa06LNT0356600.1 | osa-miR171f-5p | Cleavage | 4.0 | 18.163 | 1 | 21 |
| Osa06LNT0356600.1 | osa-miR529b | Cleavage | 4.5 | 16.458 | 1 | 21 |
| Osa06LNT0356600.1 | osa-miR2104 | Translation | 5.0 | 15.019 | 1 | 22 |
| Osa06LNT0356600.1 | osa-miR2876-3p | Translation | 4.5 | 18.629 | 1 | 21 |
| Osa06LNT0356600.1 | osa-miR5486 | Translation | 5.0 | 22.316 | 1 | 21 |
| Osa06LNT0356600.1 | osa-miR408-5p | Cleavage | 4.0 | 21.212 | 1 | 21 |
| Osa06LNT0356600.1 | osa-miR5484 | Cleavage | 5.0 | 20.908 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0356600.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0356600.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0356600.1 | 6 | qREP-6 | Resistance or Tolerance | Other soil stress tolerance | nan | nan |
| Osa06LNT0356600.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0356600.1 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Osa06LNT0356600.1 | 6 | ppl6.1 | Resistance or Tolerance | Drought tolerance | RM3 | CDO78 |
| Osa06LNT0356600.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0356600.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0356600.1 | 6 | nan | Resistance or Tolerance | Blast resistance | RG778 | RZ682 |
| Osa06LNT0356600.1 | 6 | nan | Morphological trait | Culm/leaf | RG653 | RZ140 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)