© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0357000.1
GCCCCACTGGTTTATTGTATTATTACCTCAAATCAGTCAACAGTATCTTTAAGCATTACATGATCACACATATTTACATACATGTATACAAAGATGTACACATACAAAAACATTTCGAGCCATGCCCCACCCCGAGGGAAAAAGAATTGCTGAGCACACAAAACTGGCTATCTACATGAACATGATTGATGAGCAAAACTAGCCTAGGGTTAGAGCATTATTGGAAGCTATACAGATGCCACGGCCACAACACGTGCTAGCGTTGGTAAACTGCCGGATCAGCCGTCCACAACTCCAGTACAAAGAGAACACAAGAACGTCTTGTGGAAACAACTGAAGCTTCGTCCGCATACAAGCAGTTCTCCCTCACTCACTTGTTACCATGAACGGGAGATGGCAACTCTGTGGAGATCCAAGATTTTCCATGCCTTCAGACTTAATTGGGTCCCCACCAGAATTACATGATGACAGCAAGCTCAGATGTGCCGCAAAGTTGGGGCTAGTTAAGTTCATGGACAGATTTCTCATCAGCAGTAGTACCGTTTCAACATCAATTGGATCCATCGCCTTTAAAGTCTGCAAATGCCCACTAGTATCTGGATCAAATATGCTTCCCAGAAAGCTGTATACTTGTGCAAAATCTGGCATAGCACGTAGTGGTCGAAGCATATTTTCTTGTTCAACTGCTTCAGAAGTTGGCCAAGTAGTAGAAGGACTCTCTATGCTACTAGAGCAGTTATTTGTAGCAACAGCACCTGTACCTTGCGTGCGACTTGCACTTAAAGGTTGAGCAATAGAATTGTCCCAGGAGGGTACTACAGCACTGGCATTTGTATTTCTGATGACAGGAGATGTATCCATGGACATAACACAACCTTGCTCCCCCAGAGGAGGGGGTTGTGATATAGCAGCTGGCGAAACATTTTTAGAGGCCTTCTGTGGATATGGATGAGCTGCCTTCCGCTTTGGCCTGGGTGGAGGCAGATGTTCACCTGTACCATTTTTCTGAACCTTCAAAAAGTATTTTTGTGCATGGCTCCTTATCTGTATCACAGTTTTTGAGCCAACGTATGCTTCAATCTTTTTCCAATCACGATCGAACAGCTGCAGCGCCTCGAGGAACTTGTCGTGCTCGGGCTCCGTCCAGCTCTCCCTCGACTTGGTGATGGTGTACGGCTTCCTCACCTTCCTCGCCTCCTCCCCCACCGCCGCCGCCGGTGCAGGCACGGCCATCGGCGGCTGCAGCGGCGCAGCCACCACCTGCTTCTCCTTCTCCTTCCCTCCTCCTCCCCCTCCCCCATCCCCACCTCCCCCGCCGCCCGCGACGGCGGCGGCGGCGGAGACGACGGAGGCATCGATCGGATTGGGCGTCGCGCTCATCGAAACCATCAGCCGGGGTCTCTCTCGCGCGCGCAGGATTCGCCGCGGCCGCGAGCTAGGGTTTGGGTGCTTGTGCTGCTGGTGTGCGTGCGTGTCGATGCGGGGGACGAAGCGAAGAGAAAATAAGAATGCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0357000.1 | 6 | 27740617 | A | G |
| Osa06LNT0357000.1 | 6 | 27735585 | C | G |
| Osa06LNT0357000.1 | 6 | 27736481 | G | A |
| Osa06LNT0357000.1 | 6 | 27736507 | A | G |
| Osa06LNT0357000.1 | 6 | 27736524 | C | T |
| Osa06LNT0357000.1 | 6 | 27737956 | T | C |
| Osa06LNT0357000.1 | 6 | 27739469 | C | T |
| Osa06LNT0357000.1 | 6 | 27739482 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0357000.1 | osa-miR395o | Cleavage | 5.0 | 7.356 | 1 | 21 |
| Osa06LNT0357000.1 | osa-miR1423-3p | Cleavage | 4.5 | 24.87 | 1 | 21 |
| Osa06LNT0357000.1 | osa-miR5338 | Cleavage | 3.0 | 15.725 | 1 | 21 |
| Osa06LNT0357000.1 | osa-miR5508 | Cleavage | 4.5 | 15.804 | 1 | 21 |
| Osa06LNT0357000.1 | osa-miR5508 | Translation | 4.5 | 12.471 | 1 | 21 |
| Osa06LNT0357000.1 | osa-miR5524 | Translation | 4.5 | 15.554 | 1 | 21 |
| Osa06LNT0357000.1 | osa-miR5508 | Translation | 5.0 | 16.146 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0357000.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0357000.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0357000.1 | 6 | qREP-6 | Resistance or Tolerance | Other soil stress tolerance | nan | nan |
| Osa06LNT0357000.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0357000.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0357000.1 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Osa06LNT0357000.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0357000.1 | 6 | nan | Morphological trait | Culm/leaf | RG653 | RZ140 |
| Osa06LNT0357000.1 | 6 | ppl6.1 | Resistance or Tolerance | Drought tolerance | RM3 | CDO78 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)