© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0357500.1
GGAAGAAGAGCCATGGCCATTCAGAAAACTGAAGAGCAGCATTCAGCATTTTTCCATTTGCAGGGGATATGATGTTTGGCTATACATGCACTTGCGCATAATGCACATGTCGCCAGACAGGCCCTAACTCAAAAGCAGATTCTTGGGGGCAAATGAAAGAAGCAAAAAAAGAAAAAAAAATTGGCGAGCTGTACCGATGTGAGAAGCTGAAATGGAGGGGATTTATTTTCTTAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0357500.1 | 6 | 27961028 | G | A |
| Osa06LNT0357500.1 | 6 | 27961305 | A | C |
| Osa06LNT0357500.1 | 6 | 27962754 | G | T |
| Osa06LNT0357500.1 | 6 | 27963031 | A | C |
| Osa06LNT0357500.1 | 6 | 27963188 | G | A |
| Osa06LNT0357500.1 | 6 | 27963299 | T | A |
| Osa06LNT0357500.1 | 6 | 27963655 | T | C |
| Osa06LNT0357500.1 | 6 | 27963876 | C | A |
| Osa06LNT0357500.1 | 6 | 27963912 | T | C |
| Osa06LNT0357500.1 | 6 | 27963964 | T | G |
| Osa06LNT0357500.1 | 6 | 27965404 | A | T |
| Osa06LNT0357500.1 | 6 | 27966704 | A | T |
| Osa06LNT0357500.1 | 6 | 27966920 | A | T |
| Osa06LNT0357500.1 | 6 | 27967556 | C | T |
| Osa06LNT0357500.1 | 6 | 27967872 | A | C |
| Osa06LNT0357500.1 | 6 | 27968014 | A | T |
| Osa06LNT0357500.1 | 6 | 27968212 | T | C |
| Osa06LNT0357500.1 | 6 | 27968477 | T | C |
| Osa06LNT0357500.1 | 6 | 27968547 | C | T |
| Osa06LNT0357500.1 | 6 | 27969148 | T | C |
| Osa06LNT0357500.1 | 6 | 27969979 | C | G |
| Osa06LNT0357500.1 | 6 | 27968942 | T | C |
| Osa06LNT0357500.1 | 6 | 27968278 | G | A |
| Osa06LNT0357500.1 | 6 | 27968580 | T | A |
| Osa06LNT0357500.1 | 6 | 27960937 | A | G |
| Osa06LNT0357500.1 | 6 | 27964983 | T | A |
| Osa06LNT0357500.1 | 6 | 27962110 | A | G |
| Osa06LNT0357500.1 | 6 | 27962211 | A | G |
| Osa06LNT0357500.1 | 6 | 27962356 | T | C |
| Osa06LNT0357500.1 | 6 | 27962115 | C | T |
| Osa06LNT0357500.1 | 6 | 27965104 | A | G |
| Osa06LNT0357500.1 | 6 | 27965138 | A | G |
| Osa06LNT0357500.1 | 6 | 27965160 | T | C |
| Osa06LNT0357500.1 | 6 | 27964064 | C | T |
| Osa06LNT0357500.1 | 6 | 27964301 | A | G |
| Osa06LNT0357500.1 | 6 | 27964312 | T | G |
| Osa06LNT0357500.1 | 6 | 27964524 | C | T |
| Osa06LNT0357500.1 | 6 | 27965401 | C | A |
| Osa06LNT0357500.1 | 6 | 27962090 | A | G |
| Osa06LNT0357500.1 | 6 | 27962032 | T | C |
| Osa06LNT0357500.1 | 6 | 27962052 | A | C |
| Osa06LNT0357500.1 | 6 | 27962053 | A | G |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa06LNT0357500.1 | DTM_#DNAt_MULE_japo_Os0085 | Chr6 | + | 27964978 | 27965322 | 344 |
| Osa06LNT0357500.1 | DTM_#DNAt_MULE_japo_Os0218 | Chr6 | + | 27961939 | 27962414 | 475 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0357500.1 | osa-miR1432-3p | Translation | 4.0 | 21.976 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0357500.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0357500.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0357500.1 | 6 | qREP-6 | Resistance or Tolerance | Other soil stress tolerance | nan | nan |
| Osa06LNT0357500.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0357500.1 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Osa06LNT0357500.1 | 6 | ppl6.1 | Resistance or Tolerance | Drought tolerance | RM3 | CDO78 |
| Osa06LNT0357500.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0357500.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0357500.1 | 6 | nan | Morphological trait | Culm/leaf | RG653 | RZ140 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)