© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0357600.1
CGAAATGTATAAGATTCTAAGTAAGAAGCTTTGGTGTCACAGGATCACAGTTAGCTAACCATCGTGTACAATCGGCAGTACCAGATATCAAGACAAAATTATTGTCACTATATATGTGGAATTAGTAGTATGCAGTATTCACTAGGATGATCCAGGTGAATACCTGAGGGATCAGCTGGCTAACTCTTTGGGCTATGTAGGTAGCTACTAGCTGCATGATTATCATCAGTGGTATATTTCTTTGGTGATTGATTTGAGTATTTGTATGCCATCTTTCTAATCGAGATCAGAAGCAGTTCGCTGCTGAGGAAGCTGCATGCTGGAGATGTCCTCCCGGGGCAGATGGCCAAGAGAACCTTCTCCTTCAGTGGCCGTGTCGCGACCTACTATGCGGACCGTCGAATCGCCCTCCAGCAATGGCAGGGTAGCTTTCCTGTTCTTCCGGAAAACGAGGTAGAGAATTGCAGCCATGTATATGAGCATCCCCAGGAAACCGAATATCCCGGAGAATACTTGGGATACAGTCGATAGACCGTTGTGGAGAAGCAGCTTGACAAAGCTTGTTATCAGGAAGTAGGTGTTGATGACAACGATAAACGAACCAATTCCCCATGTTATCACAGAAATGGCTTTTGAATTTGTGTGCTGCCCCATTTTTGTCCTGCTGCTTGTGAATTTTAGGAGTGGAACTAGAGCAAAAGGAAGCTCAAATGACAGTATCATCGATGCAATGATAATCAACTGTCCAGCTGCTGAGGAACCTCCAATTATCGAAACAATCAGACTTGGCAGAATTGCCAAGGACCTAGTTAGAAGGTTCCGTATCCAGGGTGTCATCCGAAGATCTAGAAACCCCTGCATGACATATTGTCCCGCATAAGTTCCTGTAATTGTAGAACTCTGGCCAGACGCCAACAAGGCTACTGCAAATAACTTTGAGCTCCAGTTTCCGAGGACATTCTTTAACAAAAACGAAGCTTTGTTAAGATCAAGATCACTGCAATTCATCTGGTCTTCAGGACTCAAATTATCTGACCCGCAGACAGCACCACTAACAGATATGATAGATATGTTAATGAGGAACGCTATCGTGAGGGCAAATGCACTTTCAATCATATAGAATCTACATGCCTCTTTGATCCCATGAACTGACCGTGGCACTTTTCTTGATAGTACCAATGCTGAGTGGAGAAAAAGATTATGCGGCATCACCATAGCACCAAGTAGTGAGATAGCAAGACCTGTGGCTCCATTCCCTTTAAGTTCAGGAACAAAAAGGCCCCTCACAACTTCTGAAGAATTTGGTTTAGAATACCCAAGCTCAACTAAGAAACAAGTTGCTATTAATGACACCAGAATAGCTATCAGAAATTCCAGTTTACGGACCCCATATTGTTGTAGTAACAGTAGCATCAGAGTGCTGAGTCCAGTTATCAGAACACCACACCACACAGGGATTTTAAAGAGCATGTTCAAAGCAAAAGCAGTTCCAATTACTTCAGGAATGTCGCATGCAACTACAGCTAGTTCCGCAAGAATCCATAATATGAAATTTGTAGCCTTTGGATATTCAGCTCTGCAATGCTCGGCCAGGTGCTTCCCAGTCACGACTCCTAGCCTAGCTGCAAGTGATTGAATTATAAGAGCAGCACATGACGCAATAAGTATGATCCAAAGAAGCTCATATTTGTACTGTGCTCCAGCCTGTAGGTCTGTCTCAAAATTTCCAGGATCAATATACGCAATAGAGACAAGAAATCCGGGCCCTATGTATGAAAATAGGTTCTTCCAACTATTTTTCTCTGGAATAACAATCTGATCAACATCTATGCTGTCAATAAGAGGAGTGCCAGGACCATTCGATTGATTGTTCCGCTCGACGCTAGAGATAAACTGTGGCTGCGACGAGCGTTGCATTGGGCCGCTCATCTCCCCCTCTCCCAATGCAAGAACCCTCAAGACTTGGAGCTGGGATGGGTGGGGAGTCCTCTCCGTGGGTCGGCGGCGGCGTGCAGGGGAGCAGCGCGCCGCGCGCGCGGAGGCGACACCGACGACGTCGTCGTCGTCGTCGCGTCGGCTAGGAGAAGAGAGACGAGAGAGGGTTGACGTCGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0357600.1 | 6 | 28059649 | C | A |
| Osa06LNT0357600.1 | 6 | 28061782 | A | G |
| Osa06LNT0357600.1 | 6 | 28061932 | T | A |
| Osa06LNT0357600.1 | 6 | 28062389 | T | C |
| Osa06LNT0357600.1 | 6 | 28062698 | C | T |
| Osa06LNT0357600.1 | 6 | 28063415 | C | G |
| Osa06LNT0357600.1 | 6 | 28063728 | A | T |
| Osa06LNT0357600.1 | 6 | 28064693 | G | A |
| Osa06LNT0357600.1 | 6 | 28064884 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0357600.1 | osa-miR7692-5p | Cleavage | 4.0 | 14.099 | 1 | 24 |
| Osa06LNT0357600.1 | osa-miR169i-5p.2 | Translation | 3.5 | 19.371 | 1 | 22 |
| Osa06LNT0357600.1 | osa-miR1425-5p | Cleavage | 5.0 | 16.636 | 1 | 21 |
| Osa06LNT0357600.1 | osa-miR2875 | Translation | 4.5 | 11.947 | 1 | 22 |
| Osa06LNT0357600.1 | osa-miR2931 | Cleavage | 4.5 | 13.846 | 1 | 20 |
| Osa06LNT0357600.1 | osa-miR395x | Translation | 4.5 | 14.995 | 1 | 21 |
| Osa06LNT0357600.1 | osa-miR2873b | Translation | 4.5 | 15.739 | 1 | 21 |
| Osa06LNT0357600.1 | osa-miR2863c | Translation | 3.5 | 15.006 | 1 | 24 |
| Osa06LNT0357600.1 | osa-miR5148a | Translation | 5.0 | 13.881 | 1 | 24 |
| Osa06LNT0357600.1 | osa-miR5148b | Translation | 5.0 | 13.881 | 1 | 24 |
| Osa06LNT0357600.1 | osa-miR5148c | Translation | 5.0 | 13.881 | 1 | 24 |
| Osa06LNT0357600.1 | osa-miR5508 | Translation | 4.5 | 12.079 | 1 | 21 |
| Osa06LNT0357600.1 | osa-miR5500 | Translation | 3.5 | 19.402 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0357600.1 | 6 | nan | Morphological trait | Culm/leaf | RG653 | RZ140 |
| Osa06LNT0357600.1 | 6 | amy6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0357600.1 | 6 | asv6-1 | Physiological trait | Eating quality | RM3 | RM217 |
| Osa06LNT0357600.1 | 6 | qREP-6 | Resistance or Tolerance | Other soil stress tolerance | nan | nan |
| Osa06LNT0357600.1 | 6 | tgw6.1 | Physiological trait | Source activity | RG264 | RM3 |
| Osa06LNT0357600.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0357600.1 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Osa06LNT0357600.1 | 6 | qLDLJ-6-1,2,3 | Physiological trait | Source activity | RM217 | RM3 |
| Osa06LNT0357600.1 | 6 | ppl6.1 | Resistance or Tolerance | Drought tolerance | RM3 | CDO78 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)