© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0358400.1
TGCTGTAGTAACACAGACGCTAAAGATCGCAGCATTACAAATTTACAACACAATGATGAATCCATGAATACCAAACCTAACTCGAATAGGCTGCCAGATACATTATCCATACAGGCTACTTGGAATCCATGGTAATAACGACGCACAGTTTGCCCAAATGTGAGAATAACCTGTTTGAGAACAATGCAACTCGTCTTCGCCACAGAAGTTATCGAGATGCTTAATTCCTAATGCCCGGTGTATTAAATGATACATTAAGATAAATAACAGGCTGGCAGCCTTAGTTTCAGGTTAGTCTGTGAAAACGCAACTGGCATGGCAATGAACGCATGTTCCATACTTCACCCTACTCCTTACTGCTGAAATCTTTGTCAATCTCCATCTGCATGAATTTACTAGTCCACAAGAACATCATCATCATCACCGCCCTCATACCTATCTGTAAAAACATTTGCAGAAGAAACAACATTTCCTTTCTCATTGTTGTCACCATCCCCCAAATTCTTCTTCACAGATAATAGTTCTTTTGCCTCAGTTCCCTTGCTGCTCTGAAAAGGTTCTAGAGCATCTTCTGGTCTATATTTCTCTGACATAGGATCCCTGTTGTCATAACTCTCTCTCCTTTTCTTCCCATTCCTTCCTTCTTCGCTAGTTGAGAGGGCAACGGATCTTTTTCTAGTTGTTTCATGATTCTGCCGTTGATCACTTGGACTCATTTCATAAGCATTATATGGATCTTCCTTAGCAGCACTAGAACCCTGATCCTTGCTACACGGCTTCAAGGTATCTGAAGCAAGCAAATCAGCGAACCTCTCAAAACGAGCTTGCGACCTCTTTAAATCATCCTGAGCTTTCACATAGCGTGCATGTGCTTTGATGAGTTTCTTTGTTTTTGAGGCCATCCTTTCGCAAGCTTCTTTTTCATCGTTCAATTGTGATTCAAGATCAGCTATTCTGCTAGAAAGTTTGGATGCTTCATTGATCTTGCCATTCAGTATCACCTCCAGTGAAGATTTCTCCTCATGTAATGCTTCCATATCCAGTTGAATGCGTTGCAGCTGTGCTTCATTATCATGTTTATCATCAGCTTTGTTGAATCTATCATCCTTTTTTCTATCTTCGTTATCAGAGGAGTTCAAACTTTCTGATGAATTAGTTTTTCCACCCTCAAGCTTCTTTCTATGCCTCTTCCTGATGGGAGATCTTGAATGACTAGAGCCTCTATCTCGAGAGCGCGGTCTGTGATCACGGAACAAATGATCCCTGGCATCTCTTTCAGGGGAATTCCTCCTATGGGGTCTCAGATGCCTACCTCTAAAGTCATCAGGTCTATGGTCTCGTCTCCCACAACCTTGAGCCATATGATTATTCAATTATCAGTAAGTAGCAGAGGCACCAACATAACCCCAGGGGGGCATAAAAGAGCAGATCCAATGAGACTAATGCATGAGGGAGACCAATATATGATCACATATCACGTGTATGATGCACCACTTAAAAAATAAATCCAGCACCTTGTAACGTGTCAGTCATGAGAAGTGAATAATGGATGGAATATCCAATTTTTGACATCATACTGAGATTATCACGAAGAAAGATCTTCCAAATTCCAATATTGTCGAACAAACCTAATTCCACTTGTCCAGATATTATTGGTATTGACTTCAAATTTTATATTTCTGTGATCATACTTGGAATGGCAGGCAAGAATAAAGCCCAAGAGGAGACCTTGCCGCTGTGTATTCAGCAAATTTGTTACAATTAGTTGCAAAAGCTGCTAGGTGCTTTAGCACATTAAGATAACATGCATCTGACTGAAACCACATGATATCCCTCAAGAAATCTCCTGTAGCAAGATAAGCATTCCAGCGACCATAAAATGTCTGATTACCAACTGAAAAGGTGTGCAATGAAAATAGGATGCGTCATCCTCTGCAAGTAGTCGGTTGGAGAAAATCTCTCTGGGAACAGCTAATTTGTACAGTAGCAAAAATATGATTAGCAAAGATGTCACATTGTTCATGAAACTTTGGCAGCCAAAGTACTATAAGAAAAGGATAATATATGGGCGATAAAACAGTACAACAAAATGATATCACACAAACTGATGGAATTATTACGCTCTAGTTTTGTATATAAATGACTCTAGTGCTGATATCACATGACCAGGTGCAGGCTGTAGAGTATATTTCTTCCAACAAGTAGCCAGAGATAGAAACCAGGTCATCAGTGTTTATCTTACAGGGCAGCTCTTGTCAGATGTTACCATGGTTGGTATTCTTCTAATCATTTTCTCTTACTACTAGCTCAGTTCCACAACATTTCCAAAAGTTTCTGCAGAAAGCACACAGCGCAGATGGAATTGATATCTCTTTCACTTCGCTGTACAACCAGCATCCCGCACTGTCTGTCATATTCCCCACATATGCAGCCCATCCTCTCAGGATTTATAAACGAAATCCAACATAAACAGATGAAACGATGTATACTCCTATTTTAAAAAGAATGCTCTTTCTTGGGGCCATGGTAGGACACCATGAATCTTCTCAAAATATGAATATCCCCCAAACTTTTCAAACTGATAGCAGATCACACTCAACCCAGTTTCACTCCGTCTGAATAATTTCCTAGAAAACAATCGGCACAATCTGTCCACAATAGAACATCGGCGGAGACAGTAATTCCATTGCAGAAGAACAGATTTAGAGCCACCTAGCTGCGGATCGAGAGCACACGGCAACCGCCGAGAAGCAGAAAAGCAGATGGGAAGGGGAGAGCGAGACGGGGAAGGGGAGGAGGGAGAGGGGGTGCGCGCATACCAGGTCCACCGCGAGGCGGGAACGGGGAACGAGGCGGCGGGCCACGGAGCTCGGCGTCGCCGTGGGCGAAGCTGCAGGAGGCGCGGTTGCACTCGCCTTGCCTCCACAGCGCGCACAGCTTCGTCTTGTACGCCGGGCCGCGGCGGGGAGGACCCATCATCTCCCTCATCTCTCTTTCACCAACCCAACCCTTCTCCCGCGGCGGCGGCGGCGGCGGCGAGGAGGAGGAGGAGACGAGACGTGGCGGCGGCCAGTGGGGAGACGAGAAGAGCAAAGCAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0358400.1 | 6 | 28458078 | T | G |
| Osa06LNT0358400.1 | 6 | 28459615 | A | G |
| Osa06LNT0358400.1 | 6 | 28460277 | A | G |
| Osa06LNT0358400.1 | 6 | 28460522 | A | C |
| Osa06LNT0358400.1 | 6 | 28461925 | A | G |
| Osa06LNT0358400.1 | 6 | 28462202 | C | T |
| Osa06LNT0358400.1 | 6 | 28463244 | T | G |
| Osa06LNT0358400.1 | 6 | 28463246 | A | G |
| Osa06LNT0358400.1 | 6 | 28463422 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0358400.1 | osa-miR5079b | Cleavage | 4.0 | 16.869 | 1 | 22 |
| Osa06LNT0358400.1 | osa-miR5079b | Cleavage | 4.0 | 15.08 | 1 | 22 |
| Osa06LNT0358400.1 | osa-miR395b | Cleavage | 5.0 | 8.874 | 1 | 21 |
| Osa06LNT0358400.1 | osa-miR395d | Cleavage | 5.0 | 8.874 | 1 | 21 |
| Osa06LNT0358400.1 | osa-miR395e | Cleavage | 5.0 | 8.874 | 1 | 21 |
| Osa06LNT0358400.1 | osa-miR395g | Cleavage | 5.0 | 8.874 | 1 | 21 |
| Osa06LNT0358400.1 | osa-miR395h | Cleavage | 5.0 | 8.874 | 1 | 21 |
| Osa06LNT0358400.1 | osa-miR395i | Cleavage | 5.0 | 8.874 | 1 | 21 |
| Osa06LNT0358400.1 | osa-miR395j | Cleavage | 5.0 | 8.874 | 1 | 21 |
| Osa06LNT0358400.1 | osa-miR395k | Cleavage | 5.0 | 8.874 | 1 | 21 |
| Osa06LNT0358400.1 | osa-miR395l | Cleavage | 5.0 | 8.874 | 1 | 21 |
| Osa06LNT0358400.1 | osa-miR395s | Cleavage | 5.0 | 8.874 | 1 | 21 |
| Osa06LNT0358400.1 | osa-miR395u | Cleavage | 4.0 | 8.874 | 1 | 21 |
| Osa06LNT0358400.1 | osa-miR396a-3p | Cleavage | 4.5 | 7.914 | 1 | 20 |
| Osa06LNT0358400.1 | osa-miR396b-3p | Cleavage | 4.5 | 7.914 | 1 | 20 |
| Osa06LNT0358400.1 | osa-miR166l-5p | Translation | 5.0 | 12.784 | 1 | 21 |
| Osa06LNT0358400.1 | osa-miR408-5p | Cleavage | 4.5 | 22.955 | 1 | 21 |
| Osa06LNT0358400.1 | osa-miR528-5p | Cleavage | 4.0 | 13.039 | 1 | 21 |
| Osa06LNT0358400.1 | osa-miR395m | Cleavage | 5.0 | 8.874 | 1 | 21 |
| Osa06LNT0358400.1 | osa-miR395n | Cleavage | 5.0 | 8.874 | 1 | 21 |
| Osa06LNT0358400.1 | osa-miR395p | Cleavage | 5.0 | 8.874 | 1 | 21 |
| Osa06LNT0358400.1 | osa-miR395q | Cleavage | 5.0 | 8.874 | 1 | 21 |
| Osa06LNT0358400.1 | osa-miR395w | Cleavage | 4.0 | 8.874 | 1 | 22 |
| Osa06LNT0358400.1 | osa-miR395r | Cleavage | 5.0 | 8.874 | 1 | 21 |
| Osa06LNT0358400.1 | osa-miR2097-3p | Cleavage | 4.0 | 13.599 | 1 | 22 |
| Osa06LNT0358400.1 | osa-miR2099-3p | Translation | 4.0 | 12.649 | 1 | 20 |
| Osa06LNT0358400.1 | osa-miR2121a | Translation | 5.0 | 17.88 | 1 | 24 |
| Osa06LNT0358400.1 | osa-miR2121b | Translation | 5.0 | 17.88 | 1 | 24 |
| Osa06LNT0358400.1 | osa-miR395y | Cleavage | 5.0 | 8.874 | 1 | 21 |
| Osa06LNT0358400.1 | osa-miR5079a | Cleavage | 4.0 | 16.869 | 1 | 22 |
| Osa06LNT0358400.1 | osa-miR5079a | Cleavage | 4.0 | 15.08 | 1 | 22 |
| Osa06LNT0358400.1 | osa-miR5144-5p | Cleavage | 3.5 | 15.759 | 1 | 21 |
| Osa06LNT0358400.1 | osa-miR5339 | Cleavage | 5.0 | 17.88 | 1 | 21 |
| Osa06LNT0358400.1 | osa-miR5339 | Translation | 5.0 | 21.187 | 1 | 21 |
| Osa06LNT0358400.1 | osa-miR5524 | Cleavage | 5.0 | 13.3 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0358400.1 | 6 | qLVG6 | Resistance or Tolerance | Cold tolerance | RM340 | RM30 |
| Osa06LNT0358400.1 | 6 | qREP-6 | Resistance or Tolerance | Other soil stress tolerance | nan | nan |
| Osa06LNT0358400.1 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Osa06LNT0358400.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0358400.1 | 6 | nan | Morphological trait | Culm/leaf | RG653 | RZ140 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)