© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0358500.1
TTACAAAGGCATGGTTTATATTCAAACTTTTTTCTTCAAACTTTCAACTTTTCCGTCACATCAAATGTTTGAATACATATATGGAGCATTAAATATGGACGAAAAAAACCAATTGCACAGTTTGCATGTAAATTGCGAGACGAATCTTTTGAGTCTAATTACGTCTTGATTTGACAATGTGGTGCTCAAGTAAACATTTGCTAATGACGAATTAATTAGGCTTAATAGATTCGTCTCGCAGTTTATAAGCGAAATCTGTAATCTGTTTTGTTATTAGTCTACATTTAATACTTCAAATGTGTCCGTATACTTCAAAAATTTTTTTTTGGCACACGAACTAAACACAGCCAAAGACAACAAAATTATTCAGCAATGTTATCTCTACAAGAAATGATGCAGCATTTGGCAGTGCTAAATTCGGCTTGAATCCCTCCCAAATATGAACCTCCGAGTCCAGTCGGATACCACCAGCATCCGTGTGCGCCAACTCACTTGTTTGCTTGCATATACAGAGTACCAGAGCCACTGAGTGCTATGGCCCATGGAAACCCAGTCGCCTGGGAGCTCTGCAGCAGCTTGCTCTCCACCCAAGGGTGCAAATTGCCCAAGATGCTTGTACCGGAATGGGCGGAAATTGTGTCGTCCTGATCCTGTTCCTGTCATGCGCAACGGACCTTCTGGATGTTCTTTGCATTGGTCCATCTTGTTAAAACATTCAGCAAGATAGTGTCCTTGTTGTGCTGCAACCTGAGCTGTTGCTGGAATACTTTTAACTTGGGAATCCACATGAGACAGAGCTTTTTTGAACTCCTCTATGTTAACCACCATCGACTCCTTGTGAGAATCACCTATGGCATCTTTTATCAAATCCCTAATGTCAAGCATGTGCATACTTTTCATATACAGTTCTACTTGTGGGTATCTTATACAAATGTCTTCAAGAACATCATTTATCTCTTTGAGTGTTAGAGTGCCGGAGTTGTCTTTATCAGCCATTTTAAATACTGTTGAAATGTCATCCATTATTTTCCTTTGAGTTATTGAAGCACAGTCACCAATTGCATATATATTATCACACTCATGAACTCTTAACCATTCATTAGTTGCCAAGACACGCCGATTAGTCTGACCGATCTGTTGCATGAAGTCCATAATGACGGGACGAGTACCAATGCCAGCAGACCAAACAGCCATTCCATATGGTACTGATACCTCACCAAGGGATTTGCTCTTCATTGTAATTAAATCATCAGAGACCTTTACCACTCTGAACCCTGTGTTCACCTCAATGCCGTCTCTCTGGAACTTCATTTCAGCAAATGTAGCTATCCGTTGGTCAAACATGTTCAATATATGTTCACCGGACTGAATAATTGTTATCTTCACAAAATCTTGAATTGCAGGATATAGCTTCACCAGATCCTCAACAAGAAAATCATGCATCTCTGCAGCAAATTCAACCCCAGTAGGCCCACCACCAATAATTACAAAGTGAAGAATCTTCCTTTTCTCCTCTTCACTAATGTTAGGAAGTGAAGCTTTTTCAAAGCAGTCTATCACATTCCTCCTGATCTTTTGAGCATCCTCTACTTCCTTCAGAAAGTAGCAGTTCTCCATCACACCAGGAGTGTTGAATGTATTTACTGTAGCCCCAAGAGCAACAACTAAATAATCATAATCAACCATAAAATCACCATTGCCATCAAAATTTGTTCCAACGGCAGACCGGCAATGGACAGCTTTCTTTGATGCATCAATCTTGAAACACTCAGCTTCATAGAATGCAACATCTTTCCTTTTCTTCTCAAGCATCTTTCGTATCGGTTCAACGATGCTGCGTGCCTCTACAGTCCCACAAGTCACACTCGGAAGCAAAGGTGTAAATGCAAAGTAATTCCGGGGCGATATGACTTTCACTTCATACTTGGAGCAGTCAAGATCTTTGAGGAAGGACGTCCCAGCCCAGCCAGTCCCAAGAACCACAACCTTCTTCTTCCTGGGAGCCTCCTGAGATGTCTCTGATGATGCATTCTCTCCAGCAGAATCAGCATACGCCACAAGGCCTCCACCACTGGCTGCTGCAACAAGAAGCGCAGCGGTGGAGACGCCGGGGTGGATGATCCTAGCCTCGCCCAAGAACCGAGCAGCAGCACGGGACGCGAAGAAGAAGAACCCCATCCTCCTCTCCTCTGTCTCTGTCTTTCACACCTCTCAGTTCATCCAAATAAATTCTGGATTTCTAGAATCAGCAGCGACAGGTACAAATGCAGGAAAGCGATGGGGAGAAAGGGGAAGATGTGGAAAAGAATCTGAAATCTGAAAGGCAGCCTACCTACTTCTCACAGCTCAGTTTGTCCCTGCTTCCCTGAGCATTGGGGCAAAGCTCTTCGCTTTCTTAACCAATCGAGTAATCAACGATGATTCGATAAACCA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0358500.1 | 6 | 28504504 | T | A |
| Osa06LNT0358500.1 | 6 | 28504374 | C | A |
| Osa06LNT0358500.1 | 6 | 28505241 | A | G |
| Osa06LNT0358500.1 | 6 | 28505403 | A | G |
| Osa06LNT0358500.1 | 6 | 28505806 | T | G |
| Osa06LNT0358500.1 | 6 | 28507174 | C | A |
| Osa06LNT0358500.1 | 6 | 28507575 | A | G |
| Osa06LNT0358500.1 | 6 | 28508234 | G | A |
| Osa06LNT0358500.1 | 6 | 28507904 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0358500.1 | osa-miR393a | Cleavage | 3.5 | 14.893 | 1 | 21 |
| Osa06LNT0358500.1 | osa-miR397b | Translation | 4.0 | 11.484 | 1 | 21 |
| Osa06LNT0358500.1 | osa-miR399e | Translation | 5.0 | 9.493 | 1 | 21 |
| Osa06LNT0358500.1 | osa-miR399f | Translation | 5.0 | 9.493 | 1 | 21 |
| Osa06LNT0358500.1 | osa-miR399g | Translation | 5.0 | 9.493 | 1 | 21 |
| Osa06LNT0358500.1 | osa-miR393b-5p | Cleavage | 3.5 | 14.893 | 1 | 22 |
| Osa06LNT0358500.1 | osa-miR1424 | Translation | 4.5 | 17.191 | 1 | 21 |
| Osa06LNT0358500.1 | osa-miR1850.1 | Cleavage | 4.0 | 11.957 | 1 | 21 |
| Osa06LNT0358500.1 | osa-miR1851 | Cleavage | 4.5 | 16.107 | 1 | 21 |
| Osa06LNT0358500.1 | osa-miR2099-5p | Cleavage | 4.5 | 10.351 | 1 | 22 |
| Osa06LNT0358500.1 | osa-miR2099-5p | Cleavage | 4.5 | 15.466 | 1 | 22 |
| Osa06LNT0358500.1 | osa-miR2880 | Cleavage | 5.0 | 16.974 | 1 | 24 |
| Osa06LNT0358500.1 | osa-miR5488 | Translation | 4.0 | 13.847 | 1 | 21 |
| Osa06LNT0358500.1 | osa-miR5488 | Translation | 5.0 | 12.614 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0358500.1 | 6 | qLVG6 | Resistance or Tolerance | Cold tolerance | RM340 | RM30 |
| Osa06LNT0358500.1 | 6 | qREP-6 | Resistance or Tolerance | Other soil stress tolerance | nan | nan |
| Osa06LNT0358500.1 | 6 | nan | Morphological trait | Root | RM4447 | RM5509 |
| Osa06LNT0358500.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Osa06LNT0358500.1 | 6 | nan | Morphological trait | Culm/leaf | RG653 | RZ140 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)