© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0359100.1
GATCAAAATTTTTCTCGCATACATCACATAAGCGTCAAATTGTGTCCCAGAGGCCAGAGATGGCAGCAAGATGCTCAAGAAGCATAGTACATCACAAATGATTCAGCTATACAACGTTGTTCTGTTTTCCCTAACATAATGCATGTCAGAAGCGTCTGAGAATACATAAAATTGGTACTCATTTCACAAGAGTAGCTTATGAATTATATTTTCTGGTAAAAGACAAAACAAACAACAAGAAAAAGAACATATCACTACACCTTGACTACATAAAGCAAGCAACCCCAAATGTAGGTTTTGATCTACTCAAGGCAAACCACCTCTTCCAAGTAAATACAAGTCGTTGCCAAAAGATTCAGTATACTCATCCAGTGTTCCAGTCCTCAAACTGTGCTGCTAGCCAAAGAAAGCTCATGGATTTCGGTTAACATCCACTCTTCTCCAGTTTGTCCTCCAAGCACTATTGCTTTTGTTCCTCCAACAACACAGGTGCTGTGGCCCCAGGCAAACCGTGGGGGTCGCCCAGGAACATTCAGTATCCTCCAGGTAGGCTTTTCTTCAGTTGGATCCAAGAGATAAAGCTGTGACGCTGAATGAAGACCTGCCACTGATCCACCAAATATCAAAACTCTCCCCCCAGGTAAGCTGACAGCAACATGATCAAGGCGAGGAGGTGGACCAGCTCCGGCTGGATTTCCTGCCCCAGGCATTCCACTACCGGTGAGGCACCGCCAGCAGGGTTCCTCTTCACTTAAGTCCATTGTGAACACATCACTTGACCGGAGTCGCAGTGGACCACTCTTAGCAAGACCACCAAACATCAAAATTTTCCTGCCACCATAGACAGACATTGAGTGGCCCAATCTCGAAGGTGGCGTCCAAGATGCAGGTACCTCCCTCCACACAGGTTTGTCCATCGTTACATCAAGAAGATATGTATCACTGAGTAGTACACCTGAGTCTGCACAGCCACCAGAAACCACCAACTTCGTCCCATCTAAAGTGCAGGAGCTGTGCCATGAACGTGGAACTGGTGGTGCAACTCCAGGAATCTCGCGCCAGGTCGGCTGTTTTGCATCCAAATCCAATGTGAACACGTCATTAAGCAGGCCCTGTCTTCCACATCCACCAAACACAACTAACAGCGATCCATTTAGGCATGATAGGGTATGGCCCCAACGGCCAGGAGGAGCTGAGCTTACATTGACATGCCTCCATTCTGGATTGCTAGCATTCAAATCCAACACAAATGTGTCATTCATTGGTTGCATGTTAACACCTTCCCCACCAAAGAGAACAACACGATTCCCTACAGCACAGGCACTGAAGTTACATCGAGATGGCTCCACGGCACCCCCAACTGTCAACTTCCTCCAAGCAACAGCTTCCAGTGTGGTCAGCTCTCTTGCCAATCGACCCCAGCCTAATCTTTTTGCCGCAGGGACAGTCTCAAGAGCTCGAGTAGTCTCACTGCCCCATGCATTCTGACAAACCATTCTCCAAAGATCTTCATTTCTTGTCAAGAGATACAACCGCCTACACACAGAGCTAACAGATGCTATATCTCTTGGTGACAACCTTGACAGGATACTCTGGCAGAGTACTTCATCAGTCAACTGGAACAGGCTAGAATATTCCCGGCAGAAGTTGCTCTGCCCTGGTCCAGTGGATATGGGCCGGAAAAAGTTATCTGGAGTAAATCTTGTAGATCTGACAGGTTCCTTCGTCAATGAGCCAGGCAATGGTCCCAAATCAACATTAGCATTGGTGAAGAACTGAATGCCCATGTAATGAGTTATGGTCTCATCATCTCCATATATAGGGGTCAGGTGTAACTTGTTCATCAATGGAGAGCCATCTTTCCTGAAATTTAGCAAATCACCACGGAATTCGGTACCATTGTCTATGCATTTGCGAATCTCAGAAACCACCATGGCATCAACTAGGGGATGTCTCCTTTGCGCAAAGGGTCCTCTGCATTGCAGGAATCGGCAGTTCCTGCCGAGCACCTCCTCCGCGCGGTATCCCGTGGCCTCCTCGAACCCGCAGTTGACGTAGATGATGGGGCAGTCGGGCTCGAGCGCGTCGGTGACGACGAGCCCGCACGGCCCCGAAGCGCGCAGCATCCCTTCAATCGCGAACGAGAACATCCCTCCGCCGCCGCCCCCACCACCACCTCCTCCCCCAAAACCACCCTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCGCCGGCGCCGATGCTGCCGGCGCCGTCCGACTCGCTGTCCCACTCCATGGGCAAACTCGCGGCCCGAAACCCTAGCTCCGGATCCGAGCTCCCGCGCCGCCGCGGCTCATCCCATGGCGCGCTGCTGCGCGACCGCGCGCGTGTGCGTGTGCGTGTGCGTGTTGGGGATTAGGGTTTGGTGGCTCGCGATTGGATGAGAGAAGAGGAGAAGAGGAGGAGGAGGTTTCGAGAGGAGGCGGAAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0359100.1 | 6 | 28970036 | T | C |
| Osa06LNT0359100.1 | 6 | 28970765 | G | A |
| Osa06LNT0359100.1 | 6 | 28970780 | A | C |
| Osa06LNT0359100.1 | 6 | 28971086 | G | A |
| Osa06LNT0359100.1 | 6 | 28974093 | A | G |
| Osa06LNT0359100.1 | 6 | 28974353 | G | A |
| Osa06LNT0359100.1 | 6 | 28972914 | T | C |
| Osa06LNT0359100.1 | 6 | 28972998 | A | G |
| Osa06LNT0359100.1 | 6 | 28973078 | G | A |
| Osa06LNT0359100.1 | 6 | 28973202 | A | C |
| Osa06LNT0359100.1 | 6 | 28973274 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0359100.1 | osa-miR6253 | Translation | 4.5 | 14.703 | 1 | 22 |
| Osa06LNT0359100.1 | osa-miR6256 | Cleavage | 5.0 | 13.968 | 1 | 22 |
| Osa06LNT0359100.1 | osa-miR166a-5p | Cleavage | 4.5 | 15.691 | 1 | 21 |
| Osa06LNT0359100.1 | osa-miR166b-5p | Cleavage | 4.5 | 15.691 | 1 | 21 |
| Osa06LNT0359100.1 | osa-miR166d-5p | Cleavage | 4.5 | 15.691 | 1 | 21 |
| Osa06LNT0359100.1 | osa-miR166e-5p | Cleavage | 4.5 | 15.691 | 1 | 21 |
| Osa06LNT0359100.1 | osa-miR399h | Cleavage | 5.0 | 18.536 | 1 | 21 |
| Osa06LNT0359100.1 | osa-miR166k-5p | Cleavage | 5.0 | 15.691 | 1 | 21 |
| Osa06LNT0359100.1 | osa-miR166l-5p | Cleavage | 3.5 | 15.691 | 1 | 21 |
| Osa06LNT0359100.1 | osa-miR169p | Cleavage | 5.0 | 14.742 | 1 | 22 |
| Osa06LNT0359100.1 | osa-miR1861e | Cleavage | 5.0 | 7.308 | 1 | 22 |
| Osa06LNT0359100.1 | osa-miR1861g | Cleavage | 4.5 | 7.308 | 1 | 22 |
| Osa06LNT0359100.1 | osa-miR1861k | Cleavage | 5.0 | 7.308 | 1 | 22 |
| Osa06LNT0359100.1 | osa-miR1861m | Cleavage | 5.0 | 7.308 | 1 | 22 |
| Osa06LNT0359100.1 | osa-miR2055 | Translation | 4.0 | 11.176 | 1 | 21 |
| Osa06LNT0359100.1 | osa-miR2118a | Cleavage | 4.5 | 7.901 | 1 | 22 |
| Osa06LNT0359100.1 | osa-miR2118c | Cleavage | 5.0 | 7.901 | 1 | 22 |
| Osa06LNT0359100.1 | osa-miR2118q | Cleavage | 5.0 | 7.901 | 1 | 22 |
| Osa06LNT0359100.1 | osa-miR5147 | Cleavage | 5.0 | 13.646 | 1 | 21 |
| Osa06LNT0359100.1 | osa-miR5147 | Cleavage | 5.0 | 11.142 | 1 | 21 |
| Osa06LNT0359100.1 | osa-miR5508 | Cleavage | 4.5 | 16.538 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0359100.1 | 6 | nan | Morphological trait | Culm/leaf | RG653 | RZ140 |
| Osa06LNT0359100.1 | 6 | qLVG6 | Resistance or Tolerance | Cold tolerance | RM340 | RM30 |
| Osa06LNT0359100.1 | 6 | qREP-6 | Resistance or Tolerance | Other soil stress tolerance | nan | nan |
| Osa06LNT0359100.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)