© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0359200.1
TCGCCAAAAAGTCATATTCATTTTGAAGAATTACCTGAGTACATGGATATGCAGACAAAGAAATGTAAATAAGAAATAACCAATCATGGAAGACCGATATGACGACTGATATAACAACTGCATCAGGAAGACTGAAGTCAGGAACTATTTTGCTCTTTTCAAATTTGATACTTCCTCAGTAATGTTTGTTCTCTTCCTGTCTGAATTGAAGAGAGGACAAACAAGAGCCAAATCGTTGGTAAAGCTCATCATGACATTACAATAATGTGCTCCTAGCAAATCCTAGTTCTGCTACACTCTATGGTTTGCACACAGATCACTCATGATCGAGGCTTAACTCTGATCAAAATTTGGAGGCTAGGTTGCATTGATGATATATCTTGGAAGTGTTGCCTTCCATTGCTAGGACTAGGAGGCTTCTGCTTCCTCTCTTTTTTTGTCATCCAACTAACTGTTCTACAATGCCAGCTTTTTGTCATCGATGCTGACCAGAAGGATTTCTTTCCCTGCTTCCTGAGAAGAGCCAGTGTGGTGCTTTTGTTGCATGCAAACTGGGGCCAATTGTTAGTTTGAGGTCAAGATCATTCTCTACGGAAGGGTCAGAAGCACTCCAATTTTCACCTCCAGTTGATCTACCACCTTCTCGTCTAAATTCTTGTGTTCTTGAGGTTTCTTCAGTGAAGAAGTTTAGGCATGTTGCTGGTTTGTATTCTTGAAGAATTGAATGCTCAGGAACTTGCTCTGGAGCACAGTGTTGTGTGCTACCAAGATGAGCAGATTGGGTTGTCTCTGATGTAGAGGGGCTATTCTTGAGGTTTGACAGGGGCCCTTGCATCATTTCTTGAGTTTCTCCTGTCCTTGATTGAAACCTGTGCTTCTCACCTCCTAGTTCAGCCATCAATGATTTTTGTACACGATATAGTCGATGCAGTTCATGCACCTGATGCAGCAGACAGCGTGAGTTGTAGAGATTTTGTGTGATAGAATGAGAAAACGACTGTAGGATGCATAATAGTTGGTTGACAACTTTTCAGATGAAGGTTTATGCAGCATGAAGAATTGCTAACTTAGTCTGCAGTTGTGCACTATGTTATATTATGGAGCTGGAACAGCTCCTTTGCTCCCATGTAAGATTGTTCTCTACTATGCCAGGCAATTAGTTGCTCTCCTACTATTTCTGAAAAAAAAAAGGAACTGGGACAGCTTGTTTTTCTCACTGAAGGCTGAAAAATGCAAAAGGCTTGACACCTTTTCAGGTATTTGAACTTTGTTTTTTCTCATGTACAATTTCCTCTTTTGTGCTACATTGATATTGAGTGAATCTCGTATTTTATGATAATAAAAACAAAGCCACTCCTTGTTACCTGCTGTCTGAAGACTTCATCATGCTCCATGATTGTTCTCCGAACTGATTCCCTGCTGTCTTGTTTGGATTTCTCCATTGGCTCTACCAAGATGTGGTGTAAATCCTTTTGCCAATTAGCTTTCAGCAATACTTTGGCTAGTTTCTGAATAGAATCTTTACTTTTTATCTCTCTAGTGGTTCTTGTTCCCTCTATCTCCAACAATGAAGAGAGGATTCTATGAAGGCCAAATAAATCAGTAGCCATCCCTGAAAGCTTGCAACTCATGTTCCAGCTGCTTGCCTTGCATTTTCCCTCCCCTTCGGTTACAGGTCATGAACACTTGGAACCTCCATATATTTGCAAGGGCACAGTATGGGACGAAGCTTTCACAAATCTCTCCTCAGCACCCATGACTCATTTCACTTGTCAGCAGTGAAGGTCCTAACTAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0359200.1 | 6 | 28989856 | T | C |
| Osa06LNT0359200.1 | 6 | 28989548 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0359200.1 | osa-miR5817 | Translation | 4.5 | 12.952 | 1 | 24 |
| Osa06LNT0359200.1 | osa-miR5836 | Translation | 3.5 | 14.424 | 1 | 21 |
| Osa06LNT0359200.1 | osa-miR156a | Cleavage | 4.5 | 17.812 | 1 | 20 |
| Osa06LNT0359200.1 | osa-miR156b-5p | Cleavage | 4.5 | 17.812 | 1 | 20 |
| Osa06LNT0359200.1 | osa-miR156c-5p | Cleavage | 4.5 | 17.812 | 1 | 20 |
| Osa06LNT0359200.1 | osa-miR156d | Cleavage | 4.5 | 17.812 | 1 | 20 |
| Osa06LNT0359200.1 | osa-miR156e | Cleavage | 4.5 | 17.812 | 1 | 20 |
| Osa06LNT0359200.1 | osa-miR156f-5p | Cleavage | 4.5 | 17.812 | 1 | 20 |
| Osa06LNT0359200.1 | osa-miR156g-5p | Cleavage | 4.5 | 17.812 | 1 | 20 |
| Osa06LNT0359200.1 | osa-miR156h-5p | Cleavage | 4.5 | 17.812 | 1 | 20 |
| Osa06LNT0359200.1 | osa-miR156i | Cleavage | 4.5 | 17.812 | 1 | 20 |
| Osa06LNT0359200.1 | osa-miR156j-5p | Cleavage | 4.5 | 17.812 | 1 | 20 |
| Osa06LNT0359200.1 | osa-miR156k | Cleavage | 4.5 | 17.812 | 1 | 21 |
| Osa06LNT0359200.1 | osa-miR156l-5p | Cleavage | 4.0 | 17.812 | 1 | 21 |
| Osa06LNT0359200.1 | osa-miR159a.2 | Translation | 5.0 | 21.008 | 1 | 21 |
| Osa06LNT0359200.1 | osa-miR408-3p | Translation | 4.0 | 19.221 | 1 | 21 |
| Osa06LNT0359200.1 | osa-miR535-5p | Cleavage | 4.5 | 18.404 | 1 | 21 |
| Osa06LNT0359200.1 | osa-miR444b.2 | Cleavage | 4.5 | 16.733 | 1 | 21 |
| Osa06LNT0359200.1 | osa-miR444b.2 | Translation | 4.0 | 21.046 | 1 | 21 |
| Osa06LNT0359200.1 | osa-miR444c.2 | Cleavage | 4.5 | 16.733 | 1 | 21 |
| Osa06LNT0359200.1 | osa-miR444c.2 | Translation | 4.0 | 21.046 | 1 | 21 |
| Osa06LNT0359200.1 | osa-miR1881 | Cleavage | 5.0 | 13.884 | 1 | 24 |
| Osa06LNT0359200.1 | osa-miR1881 | Cleavage | 5.0 | 13.218 | 1 | 24 |
| Osa06LNT0359200.1 | osa-miR2866 | Cleavage | 4.5 | 20.026 | 1 | 20 |
| Osa06LNT0359200.1 | osa-miR2870 | Cleavage | 4.0 | 11.781 | 1 | 21 |
| Osa06LNT0359200.1 | osa-miR5492 | Cleavage | 5.0 | 21.014 | 1 | 21 |
| Osa06LNT0359200.1 | osa-miR5500 | Translation | 4.5 | 16.028 | 1 | 22 |
| Osa06LNT0359200.1 | osa-miR5500 | Translation | 5.0 | 22.507 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0359200.1 | 6 | qLVG6 | Resistance or Tolerance | Cold tolerance | RM340 | RM30 |
| Osa06LNT0359200.1 | 6 | qREP-6 | Resistance or Tolerance | Other soil stress tolerance | nan | nan |
| Osa06LNT0359200.1 | 6 | nan | Morphological trait | Culm/leaf | RG653 | RZ140 |
| Osa06LNT0359200.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)