© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0359800.1
CTACTCCACTACGATCTCAGGCAGCTTCACTATGCTGTGGCTGCAGCAACTCCTGCTGGGCCTGGAGCATTTCACATAGCTCCTGCAGCACCGGCTGGCCTGGCTGGTATGATGATCCCTGTGCAAGCTCGAGCAAATGTCTTTACCTTTGCTGGTATTGCTGCAACAGTTTCTGCTGATGCAGTCAGTTGGAGGTGGAGCACAATCTTTCGGCTTCGGATGATGTCCGCAATCTTCGGCTTTGTGTTCTTCGTTGTGGTGATGCTCATGGTGGTCTGATGATTCTTCGATCGAGATCGAGTGCTCCTGGACTGGATGAGTATCATTCTTGACCTGATCATGAGGTTCATGGCAGCAATGGTTGTGGTGGTGAGGTGGTTCAGCATGGCAGTCCTTTACTTCCTCGACCTCCAGGTTGTCATGGTCATGGTCATGGCAGGGGTGCAAATCTGCGGTGTGCGGAGTTTGCTGTTCATCACAGCAATGATGCTCATGAACCTGTTCATGGTCATGGCAAGCATGCTTATCAGCGCAATGCGAGCCGATTGGCTCGTCACAGTGGATATGCTCATGCTCATGCTCATGGCAAGCATGTTCGCCGGTAGAGTGCAGAGCAACGGGTTCTTCACAGTGGCTATGTTCATGGCCATGGCAAGCATGGTCATTGGTGGGAGGCAAAGCGTTGAGTTCTTCTTTGCAGGTGCTATGCTCATGGCCATGGCAGTCATGCTTCTTGGTGTCGTGCAGATTGCTCGTATCTGCGCAGTGGTTATGACCATCATGGCAAGCATGCTTGTTTGTAATCAGCTGGTTGCTTGGCTCTTTGCAGTTGCTATGGCCATGGCTGTGATCATGGCAACCATGCTGGTTCGAAGAATGCTTGTGGGCTGGCTCTTCGTGATGGTTATGCTCATGGTGGTGATCATGACAAGCATTCTTTGCAACTGATGATTCTTTGCAACTGACCATTGATTTGCACGGACCATCCGAACAATGGTGGGAAACGCCATGATTTTTCTTTGCATGAGATCCATGATGAGAAGAAGAACAGCACTTCTTTGGAGATCCGTGATGAGAAGCAGCACATTTCTTCGCCTTTCGACTGTCCTTCTCTCTCAGCAACAGCATGCTGTACATGATCACCAGCAAGCATGTGCCAACATCTGCAAGGACGGCTGCCCAGATAAGTGGATGTCCGGCAAATGCAAGCCCAACGATTGCAAGCTTCGTAATCACCGAGAATATGATGTTCACGATGATTGTCCGATGCGTCCTCCTTGCCAGCCGGACAGCCTTTGGAATCCTGCGGATGTCATTTGACATCAGAGCAACGTGGCTTGTCTCCATTGCAACAGCTGAACCAGATACACCCATAGAGACTCCAACATCAGCTTTAGCCAATGCCGGGGCATCATTCATGCCATCACCAACCATCAGCGTAGGGCCATCTTTTTCCTTGAGTTCACCAACAATTCTCACTTTGTCCTCTGGAAGAAGTTCAGCATGAACCTCAGCAAGGATATTTCCCAGCTGATTCTGTGCATATGTGGCAGCAGCGCTACTATCACCTGTAAGCATCACTGACTTAATGCCCAGTGATCTCAGTTCCTTGATGGCCTCAGCTGATCCAGTTCGGCAGGCATCCGATAGAGTGAATACTCCAATCAATTCATTGTTACATGCCACATATCCAATGGTAACTCCTTTCATATCTTTCATGTCCGGAACTGTTTCGCATGAAGCTCTTGACAAAATTCTTTTGTTCCCAATATATATGCCTGCTCCGTCGATTTCACCATAAATCCCCTCACCAGGATATATTTGGAATTCACTAACATTCTCTGATTTTGGTTCCACAGACTTTGATTGAGCATAATCAACCAGGACAGATGCCATGGGGTGACTTGATCTGCTCTCAACGCTCGAGACCCAGTAAAGAAGTTGTTGCAATGAAACACGTTCACCAACTGGCTGGAACTCCTCAACACTGAACTCTCCTCTAGTAATTGTACCAGTTTTGTCAAAAGCTGCAACTTTGATGCTAGCCAAGGATTCCAGGACATCTCCTCCTTTGATGAGCAGCCCTGTCCTTGCGGCCCTTAGTAGCGCGCAGAAGGTGGCAATGGGTGTGGACAGTACCAGTGCACATGGACAAGCACTCACTAGAAGAACTAGAGCCAATTGGAACCAGTGCTTAAGGTTATGTGCTTTCGCTATTGCAGGAATTGCTGCTACTGATCCTGCCATGACAACGACCGCAGGTGTGTAATACTTAGCACACGTGTCGATCAGCCTCTGTGTACTGGATCTGCTGTTTTGTGCTTCTTCAACCAACCTTGCCATTTTGGCCACCGCGGAGTTGTCAGCCATAGCAGTCGTCCTCACAGCAATGTAACCGTCAATGTTGAGTGTGCCAGCCCAGACCTGGGAGTCTGGCTGCTTGGACACTGGGAAGGACTCCCCCGTGAGGGTGCTCTCGTCGACCTCACTACGTCCATCAACAACAACACCGTCGATTGGAATGACTTCCCCTGCCTTGACAGCAATTACTGTATTGACCTTCACATCCCGGGCTGCAACCACCTCCCCGGTCTCTGCCAGAATAGCCTTTTGTGGTGCCATGCTCATTAGAGCTGACATCCCAGCGGTGGCCTTGTGGCTGGCCCTAGTCTCAAGCCATTCAGCTGTAGTGAAGAGGAAGACGATGAACCCAGCCTCAGAATAGTCCTTGAGAGCTATTGCTCCAGCAACTGCACCAAACAAAAAAAGTAAGTACAGACATACAAAACTCTGGGTTTTGTGTTGTCATCCATCTCCTACCAAAATTGCCTGGATTTAATGGCATGTAGAAAGTAATCTACCCATAGGTGCTGGCAAGATAGCATGGGTCATCCAAGATAAGAAGATAGTGCCAAAAAGGATATAGAAATCACCCGGCGAAAAAAGGATATAGAAATCATGGTTCATGATAATATTTGTTAAAATATAAGATATTCACATATACAATTTGCCTTCTTCTTAGTAGTACCAATAAAACCCCACTTTTTCACTTCACTTCCGTGTCAAATAAAACATTATATACAGAAATCATTTGATATATTCACCTAACTAAGAAAACCAGAAATGTTGTCAACATACGACAAAGAAAATTTGCACTTTCCTTTTTTTTTTACCAAATCTTCCAAATCTTTTTTTCTTTTTGAAACAAGGTATTTCTTGTTTCTTTTGATGATTCTTTCATGTATCCCATATTCCCATATGCATATCACAATAGAGCTATCTCAATGCCACGATATTAGTCTAGAAAGAATTATTCGAAATATGTGTAGCTTCTTGATAAGAAATATGTTGCTTGTTCTAAAAGGAATCTGATGCCCTATCTGAGGTGACATCGCCACATGGAGGAAAAGAAGCAGAATTGTTCATCTAGCACGTATATTAGCATCACAGCAACATATCCTTTTGATGTGATGGAAAGTGAGGGACCCTCTAGAAAAGAAAAGAAAGCAAAAGTTTATGCAAGTGAGACATAAACTTTTGAGAGATGGATTTCTGCTTCTGCTCTCCCACTAATCACCCACCATATTGGTCCTCGTGAAGAAACTTGCTTTTGTCTCTTTTTTTTTCACAACCCATTGTCACACTGGTAGAACAGGTATCAATAATACCCACAACTTCAATCCGTAGTTGAATATTTACCCAAAGTGGTGTTGTATTTGTGTCTTCTACACACAAGAGAATACTATGGTAAAAAAAGGAACAAGTATACTGTTGCCCTTTTAATACAGAAAAAAAAGCTTCAAACCCATGGCATCAACGTTAAAACTCAATGCTCTACTACTAAGCTGTGTCAATAATTTGTTTTCTTATTTCAAATGAGACTATTCAATTGGAGGATATCCTTAATGGCAGATGTGTTTGCTACCATTCGATACTATTTAAACGTTCATTTCTTTTCAAAAAGTATGGTGGGACCTCTGCTTTTCATTTCATTAAAGAGAGAAAGTAGGTTTTGGTACAAGCCAAAATGCATGCATTAGGCCACCAGATGAAGGAAGCCTATTTAAAATTTTATAATTCAGTTATCTCCTAAAGATCAAAGGGTCTTCGATCGTCGGAGGTGATGGTCAGGGCCATCCTCCAACAAAAGGGAGCTTCTTTTTTTTTCAAGGTACCAATAACAGGAAACATCATTAATGTCACAGGTGAATTATAGGCTGTTCTTACCAGCAATCAGCATGAGTATGTTGACATCCAGGGTGAGTCTCCGGATGGCCGCAATGCTCCTCAGCACGATCGGCGGCAAGCCGGCGGCCGCAGCCACCAGCGCGAACCACTTGAGCGGGTGCCAGAAATGCTCGAACAGCGACACGACCAGAAGAAGTCCGCAGAGGAGAACATACGGGCTCGGCCATTTGTTGGTGATCTTCTCACTGCCGTTCCCATAAGCCCGAACCGACGCCTCCAACCTTGCCTGATTCAGCGCCTTGACGATTTGGGATTGGGAGATGGCGTCGACGTCGTGGACGACGATGACCGTCCTGGAGGGAACGATCACGGTGACCTTCTGGACGCCCTCCAGCGGCTGCAGAAGCTTCTCGACGAGGGGAACCTCCGACGGGCAGCAAATCCCCAGCACGTCGAAGTAGCTCTTCTGACACCTCCCTCCCTCCGCCGCCATCTCTCCTCACTCTCTCCCTCTTTGCGTGCCTTTGCCCTCTCTCTCTCTACAAACCCCCCACCACAACACACACTTCTTCCAACCTCCAAAACCTCGATCAATCGATCCACCCAACTCCCAAGAAGAACAAGACGCAGGTAAAACAACGCAAGAATCTCTCTACCAAGAATCGTCGTCGGCGGCGGCGGCTGGAGGAGGAGGAGGAGGAAGCAAGAAGAGATTGGCTGTGCGAATCGGGGATAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0359800.1 | 6 | 29476981 | C | T |
| Osa06LNT0359800.1 | 6 | 29474211 | T | C |
| Osa06LNT0359800.1 | 6 | 29474961 | T | C |
| Osa06LNT0359800.1 | 6 | 29475467 | T | A |
| Osa06LNT0359800.1 | 6 | 29476263 | C | T |
| Osa06LNT0359800.1 | 6 | 29476377 | C | T |
| Osa06LNT0359800.1 | 6 | 29477009 | C | T |
| Osa06LNT0359800.1 | 6 | 29478404 | A | C |
| Osa06LNT0359800.1 | 6 | 29478934 | G | T |
| Osa06LNT0359800.1 | 6 | 29479094 | A | G |
| Osa06LNT0359800.1 | 6 | 29479180 | T | C |
| Osa06LNT0359800.1 | 6 | 29480158 | C | G |
| Osa06LNT0359800.1 | 6 | 29480354 | C | A |
| Osa06LNT0359800.1 | 6 | 29480673 | A | G |
| Osa06LNT0359800.1 | 6 | 29480890 | C | T |
| Osa06LNT0359800.1 | 6 | 29480530 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0359800.1 | osa-miR5535 | Cleavage | 5.0 | 15.786 | 1 | 22 |
| Osa06LNT0359800.1 | osa-miR5544 | Cleavage | 3.5 | 19.952 | 1 | 22 |
| Osa06LNT0359800.1 | osa-miR5143b | Cleavage | 3.0 | 12.98 | 1 | 24 |
| Osa06LNT0359800.1 | osa-miR6246 | Cleavage | 4.0 | 13.001 | 1 | 23 |
| Osa06LNT0359800.1 | osa-miR6249a | Cleavage | 4.5 | 24.931 | 1 | 21 |
| Osa06LNT0359800.1 | osa-miR1861o | Cleavage | 4.5 | 10.733 | 1 | 22 |
| Osa06LNT0359800.1 | osa-miR6249b | Cleavage | 4.5 | 24.931 | 1 | 21 |
| Osa06LNT0359800.1 | osa-miR418 | Cleavage | 5.0 | 12.446 | 1 | 21 |
| Osa06LNT0359800.1 | osa-miR426 | Cleavage | 4.0 | 13.419 | 1 | 21 |
| Osa06LNT0359800.1 | osa-miR444b.2 | Cleavage | 4.5 | 18.965 | 1 | 21 |
| Osa06LNT0359800.1 | osa-miR444b.1 | Translation | 3.5 | 20.32 | 1 | 21 |
| Osa06LNT0359800.1 | osa-miR444c.2 | Cleavage | 4.5 | 18.965 | 1 | 21 |
| Osa06LNT0359800.1 | osa-miR444c.1 | Translation | 3.5 | 20.32 | 1 | 21 |
| Osa06LNT0359800.1 | osa-miR444f | Cleavage | 4.5 | 18.965 | 1 | 21 |
| Osa06LNT0359800.1 | osa-miR1439 | Translation | 4.5 | 7.354 | 1 | 21 |
| Osa06LNT0359800.1 | osa-miR1861a | Cleavage | 4.5 | 10.733 | 1 | 22 |
| Osa06LNT0359800.1 | osa-miR1875 | Cleavage | 4.5 | 5.896 | 1 | 24 |
| Osa06LNT0359800.1 | osa-miR1320-5p | Cleavage | 3.5 | 13.317 | 1 | 21 |
| Osa06LNT0359800.1 | osa-miR827 | Translation | 5.0 | 19.157 | 1 | 21 |
| Osa06LNT0359800.1 | osa-miR2094-5p | Translation | 5.0 | 22.521 | 1 | 21 |
| Osa06LNT0359800.1 | osa-miR2864.2 | Cleavage | 4.0 | 24.176 | 1 | 21 |
| Osa06LNT0359800.1 | osa-miR5143a | Cleavage | 3.0 | 12.98 | 1 | 24 |
| Osa06LNT0359800.1 | osa-miR5490 | Translation | 4.5 | 16.123 | 1 | 21 |
| Osa06LNT0359800.1 | osa-miR5492 | Translation | 3.5 | 10.546 | 1 | 21 |
| Osa06LNT0359800.1 | osa-miR5508 | Cleavage | 4.5 | 21.462 | 1 | 21 |
| Osa06LNT0359800.1 | osa-miR2095-3p | Translation | 5.0 | 15.602 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0359800.1 | 6 | nan | Morphological trait | Culm/leaf | RG653 | RZ140 |
| Osa06LNT0359800.1 | 6 | qLVG6 | Resistance or Tolerance | Cold tolerance | RM340 | RM30 |
| Osa06LNT0359800.1 | 6 | nan | Physiological trait | Source activity | nan | nan |
| Osa06LNT0359800.1 | 6 | qREP-6 | Resistance or Tolerance | Other soil stress tolerance | nan | nan |
| Osa06LNT0359800.1 | 6 | ph6 | Morphological trait | Dwarf | RZ667 | RG653 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)