© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa07LNT0382000.1
GGCGTATGACAATCACGGTATTTGCAAATTTGCAGGTAGCAACCAGAAGAAGAAACAGACGACAAGCGATATTTGTTCTAGCTAAGCAAAGCATGAAAACTCCAGCATATACGAGATTGTGCCCCATAGGCATGATGATCTGATCTCAAAACACATGAGAATACATAGGAGATACGGTCTCTACTCAACGCCTCAGCAATCAACATCACAACAATAGTCAGCTAAACGGTTGCAACTCCTTGATGTGCTCCAAGGAGAGGATCAGAGGACTGCCTCAATGGTAACCTAGTAACCTACCAATATACGGCCACATCAAACTTGCTAAATTTTTCTTTTCAGGGAAGGATCGAGGAGTTAATTCTCGATAATCACAGCAACAGTCTATGATCACGCTTCCTGCCATGCTCAAAGAAAAGGATCTCAGGACGGAGATTGGCCTGACTGTACCGGTCGATTAATCCTTTCCAGGATTCAGCTTGCTGGACTGTCGTGCTGTCATGTATGAGCCACCTTGCCTCGTCACGACCAAAGCAGAGGTATTGCCGCCCCTCATCATCATAGCATACTGCAGAAACCAGAGTGTACATGCTTTCTGATTGCAGACCTTCGTAGATATGACTAATGTCCAACTCCGCTGCTAGGCTGATCAATACTTTATGCATGTTAATATGGTTTCCCTTGTTGTCTGGCCATCTCAAAACTATCATGAAAAAATGTGGTGGATACCATAGGTATCGGGTAATCCTATGCCCACAGCCACCATTCCTGAAGTCACAAACTGACTGCTTGTCTACAGCTTTCAAGAGTTCACTGAAAGACTCCAACGTAGTTCCTTCAACAGAACCCAAATTAATACTGTGGAAGAATGTAGACTTGGTTTTCATGGGGACCTCATTCACACAGTTGCATTTCTTCTCAATAATGTGCAACCCAAAAAGATTGTGTGCTAGGCATATACAACCCAGAAGGCTGGGCACTATTGCTGTTTGTGGCACCAAAGATTCACCCTTGAACTCAAAATGCAAAGGAGTTTGTGCCACGTGCAGCCTCTCAAGGATTGATTCAACAACTCTATACGCAGAAATGTTTCCAGCCAATAAGTAGTTTAAGAAGAATGCCATTTTGCCTATCTTTTCCAATAGTGCCCAAACAGAACTATGGAGTCAAAACTCAAAACTTGAAAGATATCAGGCAGCTATCCAGTTCATTTTATATGAAATATTTATAACTTATCCATTATAAATATGAGTAAACTACATGGAGACGGTTAGCATTTGATAAGAAAGTTGCTCTCTGGTATTTTCCCTGAGGTCACAGGCTGCATTTAGATAGGTGGGAAACAGAAAGCGAACGCAAACCTTTTCATCAATCACAAAACTTCTCAAAGAATCAACCATGAATATCGCTGAACTAGGTAGGTCACATGTTTTGCACTGGTCCCAAGAACGGAAGATACGCAACAAGATAGCGCGATATACTCTGGCTTTAACATCAGGGGATATACATGGTATCTCCCAGAGATCACCGCAGAATCTCCTTATGTGCCACAAAGACCGGAGAATGGCATCCAAAGGAACCTGTGGTTTATGACAATTTTGTGGATGAGCAAGTAAAGCATCCTCTAGGGGATCATTAACCAATTTTGCCCAAAGGCAAGCCTTTGCAATAGGTGAAATAACCGCAAGGCAATCAACTTGACAAGTTTTCAGAAGACTTTCCTTCCAGTAATCCACCTCAGCATCAATTAATAGCATCTCAACTCGTGCAGAGCCAATCCAAGAATCAAAATAAGTCTTGATGTCAATATCTCTCTCAAAAATGGCCTTAGGAAGGAAATAAACACCTCCTTGTATTCCTTTTAGCTCTTCCCATGAGCTGAATTTCAGCTTCGCTTTACCCAATGCTCGACTTATGTTGTTAAGAATGTCAGGTCCATCAACAAAACATTCTCTCCACATGCTGAAACACAATTCCATGGGATCCTCAAGCAAAGGTTCAGATAATAGACAGGCAAAAAGTCGATCTGCCTGGCTAGAACCATCAGTTTCTCTTGATGCAATCTTCTCACAATCAAAAGATAGTGTGCCTGTCTCTTGGGACCAGGTAATCCCAACAAGCGAATCTTGCTGGCTCTCTTGTTCGCCATTGCGACGCTTATGATGGTTGCAGCCTCTATGGGTATGCACAACGAGCGAATCTTGCTGGCTCTCTTGTTCATCATTGTGATGCTTCTGATGTTCCCAACCTCTCTGGGTCTGCACAACGAGCTTAAGCGGCTTGAGCAATTCACACAGTTCCTGAAGGTGTGTGGAACTCAACTGTCCAATCCCACAAGACCCACACATGGATACTACCAAAGGTGCTACTGGCCTGACCCGGTTCATTATGAACTTGTGCATGATGTACAGAAGGTTGAGAGAAACGACTTCCAAATCAATGAGCTCAAAGACGATTTCCTTAACCTCGCGCAAGATCTTTGTCCTCCCTGCCAAATCATCTCCATCGGTTGGCTCCCATCTCCATGATCTGAGAAGCTCCCTCTCACTGTCAGATATTCTTTCGGGTACTAATGACAGAAATTCTTTGCCCACAATATGTTCCTCATCGATGTGACTCTTGAAAGCCGCGAATTCCACGTAGATCATTCCGGAGCAGAAAGGGCAAGACCAACCCTTCTTGACGAACACCTCAGCATCGGAAAGCATACTTGTCATATCCATCAACCCTCGTGAGCGGCAGTACGACTTCATCTCTCCAAAACTCACCTTGAGGAGCGCTTGCCGCTCCTCCTCGCTCATGCGGCTCCAGCGATCGCCGGCGATTCCGAGGTCGACGGTTTCCGGCGGCCACTCCGGCGTGGACGCGGGCTCCGGTGAAGCCGCGGCTTGCCCCTTGCCCTTCTCGATCCTCGCACGCTGCCCGCGGATCGTCTCTCGGCCGTGGGCTTTCCTGTACTCGAGATCGAAGGGGTTGTCGTGATGATCGGCGGAGGAGTAGCGGTTGCTCACGAAGGTGTAGTGCAACGCCGGGTCGGTGGGCTCCGCCACGCGGAGGGCGCGGTCACGCACCTCCGCTGCCTCGTCAAACAAATCCATGGAGATGAGCGCGTCGATGAGCAGCGAGGCGATGTGGGGGCAGCGCGGGGCGAGCACCGCCGCCAGCTCGAGCTGAACCCTCTCCTGCTGCCGACTGTTGCGCTGAAGGTAGCAGCGCGCGAGGATGGCGCGGGCGAGTGGCGACCACGGGTACCTGCCGACGAGCGCCGTCGCGAGCGAGAGCCCGTGCGCGTGCCCTTGCTCGCCCTCCTCCGTCAGCGCGACGATCGCCCTGCCCGCCTCCTCGCGGAAGGCGGCGTCGCAGTCCGACCAGTCCCGGTTGCTCTTGCTCCCCACGACAACACCCGCCATGGGATGGGAGGAGCTGCGGCTTCGGCCTCAGCCTCAGACGTGCTGCTGCTGCGGCGGCGTCGTCCTCGTCGTCGTGGACGTGGTCACGGCGCGAGGCAGAAGGCGGCGGATTGGGTCCCGCCGCACCGCTCCCCGGTCGGCCGAGGGGGAGGGGCGCGAGGTGTTCGACGAAATGCCGAAGCGGAGAACGAAGGTGGCGGCGGAGGCGGAGGATGAGGAGGCGGGTGGGGAGCAAGTCTCTCTCGGCGGAGCAGGAGGGGGAGGAGACATGTAGCCGGCGACGGCGAGGCGGTTGCTGAGGTTTCGGCCGTTGGGGTGGGGCCCAACTGCCAGAGAGACGGAGAGAGAGAGAGGCCCGTTGTGGTGGGGCCCACGACACCCGCTAGCGAAGGGATGCGGTGTCGGCGGCGGCGCTTCCATTCTAGAAGCTTCTGGAGACAGCCCTGACCTGCGCCGACGAGAGGAAGGGAGGGAAGAGCTATGGAAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa07LNT0382000.1 | 7 | 19739763 | T | G |
| Osa07LNT0382000.1 | 7 | 19738372 | C | T |
| Osa07LNT0382000.1 | 7 | 19741340 | A | G |
| Osa07LNT0382000.1 | 7 | 19737973 | A | C |
| Osa07LNT0382000.1 | 7 | 19737978 | A | G |
| Osa07LNT0382000.1 | 7 | 19738266 | A | C |
| Osa07LNT0382000.1 | 7 | 19738272 | C | A |
| Osa07LNT0382000.1 | 7 | 19738837 | T | C |
| Osa07LNT0382000.1 | 7 | 19738992 | G | A |
| Osa07LNT0382000.1 | 7 | 19739562 | A | G |
| Osa07LNT0382000.1 | 7 | 19739813 | T | C |
| Osa07LNT0382000.1 | 7 | 19740272 | A | G |
| Osa07LNT0382000.1 | 7 | 19740513 | A | G |
| Osa07LNT0382000.1 | 7 | 19740629 | A | G |
| Osa07LNT0382000.1 | 7 | 19741205 | A | T |
| Osa07LNT0382000.1 | 7 | 19741274 | A | T |
| Osa07LNT0382000.1 | 7 | 19741502 | T | G |
| Osa07LNT0382000.1 | 7 | 19741733 | G | A |
| Osa07LNT0382000.1 | 7 | 19742098 | C | G |
| Osa07LNT0382000.1 | 7 | 19742297 | A | C |
| Osa07LNT0382000.1 | 7 | 19742683 | C | T |
| Osa07LNT0382000.1 | 7 | 19743038 | A | C |
| Osa07LNT0382000.1 | 7 | 19740475 | G | C |
| Osa07LNT0382000.1 | 7 | 19737773 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa07LNT0382000.1 | osa-miR399h | Cleavage | 5.0 | 19.195 | 1 | 21 |
| Osa07LNT0382000.1 | osa-miR396e-5p | Cleavage | 4.5 | 20.232 | 1 | 21 |
| Osa07LNT0382000.1 | osa-miR1429-3p | Cleavage | 5.0 | 10.533 | 1 | 21 |
| Osa07LNT0382000.1 | osa-miR1857-5p | Translation | 4.0 | 21.893 | 1 | 21 |
| Osa07LNT0382000.1 | osa-miR1865-3p | Translation | 4.5 | 12.16 | 1 | 24 |
| Osa07LNT0382000.1 | osa-miR2093-5p | Translation | 4.5 | 12.323 | 1 | 20 |
| Osa07LNT0382000.1 | osa-miR396g | Cleavage | 4.5 | 20.232 | 1 | 21 |
| Osa07LNT0382000.1 | osa-miR396h | Cleavage | 4.5 | 20.232 | 1 | 21 |
| Osa07LNT0382000.1 | osa-miR396d | Cleavage | 4.5 | 20.232 | 1 | 21 |
| Osa07LNT0382000.1 | osa-miR3980a-5p | Translation | 4.0 | 21.962 | 1 | 21 |
| Osa07LNT0382000.1 | osa-miR3980b-5p | Translation | 4.0 | 21.962 | 1 | 21 |
| Osa07LNT0382000.1 | osa-miR5150-3p | Cleavage | 4.0 | 21.589 | 1 | 24 |
| Osa07LNT0382000.1 | osa-miR5523 | Cleavage | 5.0 | 14.258 | 1 | 22 |
| Osa07LNT0382000.1 | osa-miR156b-3p | Cleavage | 5.0 | 21.861 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa07LNT0382000.1 | 7 | qNFGP-7-1 | Physiological trait | Source activity | RZ471 | RZ753 |
| Osa07LNT0382000.1 | 7 | dth7.1 | Physiological trait | Flowering | RM125 | RM336 |
| Osa07LNT0382000.1 | 7 | qSDS-7-2 | Physiological trait | Germination/dormancy | RM320 | RM234 |
| Osa07LNT0382000.1 | 7 | sp2(t) | Morphological trait | Panicle/flower | nan | nan |
| Osa07LNT0382000.1 | 7 | nan | Resistance or Tolerance | Insect resistance | RG773 | CDO59 |
| Osa07LNT0382000.1 | 7 | qLTG-7 | Resistance or Tolerance | Cold tolerance | R1440 | R1357 |
| Osa07LNT0382000.1 | 7 | qLTG-7 | Physiological trait | Germination/dormancy | R1440 | R1357 |
| Osa07LNT0382000.1 | 7 | Ph7a | Morphological trait | Dwarf | RG650 | C285 |
| Osa07LNT0382000.1 | 7 | Ra7a | Others | Others | RG650 | C285 |
| Osa07LNT0382000.1 | 7 | QRl7 | Morphological trait | Culm/leaf | CDO497 | CDO385 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)