© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa08LNT0396900.1
ACTACTGTATTGCTCTCATGTCATGGTTTAATACAAACTGGTCAAACTACTGTGTTGCTCTCATGGTTTTTGTCTCTGATGAAAACAATTACAATTGCTTACATTAAACGAACAGTAGGTTAAGCAGAAAAGAAGCTGTGGTTCAACCATGTTCTTCTAGTGTAGACAAGCATTGGGTCTGAACAGATTAATTCCAGGTTTATAGCTGCATTACCTCTGTCGAAGACGAAAATTCGCCGTTGATCTTACACATCATGGCATCATCAATCTCCACCCTAGTCCAGAGCTTTGGAAAAGAATAAGGAATCGTAACAGATGCAACAGATTCTTGGTTGCTCAATTCATTCTTCTTTCCAAACAGCTGCGCCGCAATACCAGAGCAGATCTTCAGATCAACCTCACTCTGTGCTCTTATCATCTTAGCAAGGAGCTCAGTCATCTTTGCACCTCTCTCCATTTGCTGCTTGATGGATAACTTGACAGGCTTTGGATGGTCATCTGGATTTTGGTCAGGAGGGTTGTCATCCTCGTAGGTGCTTTTGCTTTCTAGCAATTCCTTTATCTTCTGGTCCAAAATAGTAGCAATCCTGTCCCGGAAGCCATCTGCATTTGCAGAGTCCGATTTCAGCCTCACCTTTGCCTCGGAAACCAATGTTTCCATCCTCTCTTCTGAAGAAGTTGCTTCAGGTTCAGGTTCATCAGCAGCATCTTCTGTAAGACCGAACGTTTCCTCCAGTAACCCAACATTCTGTGTATACCTTTCATACGCTTCATTTTCAGCATCGATGTCTCCTTGGATATGTTCTTTTAGCTTCTCAAACCTCCACTTGTTTATGCCCATAACATCCTTTTTGGCAAGGGACTTCTTTGTTCGGAGGGAATTCAGGAAATGATGGGGAAGCCTTTGCAGAGAAGCCAACCTTGATGAACCGGTTGAAGGTATATTAGCTGATGGTTGCTCTGACAGAGGAGCTGTTGACAGAGGTGGCTTATCTGGCAATGTGTTGTTCTGTTTCAGAACTGTCATGATTGGTGATAAGAGGTGGTTAGTGGCTTTTTCAAAAATATTAGAAAAATACAGAGTCCAGACAAATCACAGAAAATATGTAGACAGGCATAACATCATAGCCATAAATCAAAATTTCTTGTATGTAACCAAATGTTGCTAATCCCTTATACACCAGAGAGAATAAATTTTGACAGCAACATTCAGTGCCATATAATGAAGAGTATAGAGAGAGATGAATATAATTCGAAAGCAGATTTAAGAGGTACAATACAACAAATAAGAGCCCTTCAAGGTACACCCATGAGGCCATTATCCCTCCAAAACACATTTCTGAAGGTCCATTTGATTTTAGAGACCAAGGCAATAATAATGCTATGGCAAGGGTCAATTTAATTTTAGAAACCAAGGTTGTCATGGGCTCATGGCACTCAAGTGAGTCATTACCACAGTCACTAGATCATGATACAATACTGTCGTTCCTGAACCTGTCCCAGTTTGCTGGTCACAGTTGATGCAGGTCACCTCCAGGCCGTGTTTGGTTATTAGAGGCATCCAAATCAGGTACAGAAACCTACCTGATTTTGATTGGGGCAACAGTGGCCAGGTTCCTCGCCATTCAGGTGGTGCTGGCATGTGTGAAGGTGTGTGGTGGCACACTGCAGGGGATAATCCAGCAGTAGAAGATGGGGACCAAGTTGCTACACCCTGTGATCTCGTGGCCCTCAAGGTTCTCTGTCGCCGATGCAAGACAAGTCAGCAGAAGAGGGGAGGAGGTTTGGAGAAGACTAGGGCATTTGCTTATAAAAGATGGTGGCAAGGGTGTCTGCTGAAAGCCTGAAACTGCATCGATGGCGAGGATATGAGATTATGTTAGAACTGAGGAGATAGAGCAACAGAATTGTGTGGCTGGATGGGTCACATGTCTGATGTCTCTACAACCCAAATATTTATTTGTCTCATTTCGTGTTCCCTTCCTTGTAGTGTAAAACTGATTATCTTCCTTGGGTGTTTGTGTATGACATACCATAAAGTAGTAGTAATTTATTTTATACCATATAATTTATTTTGACAGACCAAGTAGCTTGTTCATCGACCTAGATTCATTGGTTCAGGTTCAGGGTCACATCCCACATCCTAAACTACAGTCCTGAAGAAAACTGCCGCTGTTTGATCCAACCTGACAAACATACTGAAATTCTTCTCTACACCCTTTCCCTCATTTCCTTCCCTAAACCCTACAAAATATGAAGATCAAACATTCTGTTGACCAACATCATCCCACTATTTGAGCAGCCTGATGGAGAAGCATTAATTGGTTGTTAATGTTGTTCAATTGCACGCGACAACATTGTCAGTACTGAGAAAAATAAAAATCCAAAATGGAACAAAACGTTATAATAATGCATTTCTATACCTGTAGTTTCCCTTTTAGATGTTGAAATGAGCATGTTCAAATCTTATCATTATAAGTTTGATCAACGGTCCATAAGAAAGTGACCGTACCTTAAAATTCCTCCATAATTGAAGTATCCCACTACCCCACTTACAAGCAATTGTCCTAGCTTTGATGCTAAGTAGCTAAACGTGATAAGCATTCCCAGAATAAATTGTAAACAATAAAACAGGTAAATCTCCAACTGCCAAACAATGAGTAATAGTCCACAGAAAGGTAAAACTGCAAGACCAAATCACGCCTGTCAAAAAAATTGGTTGGATCAAATGATCGAATAAGTGGATGTACAGGTATTCAGTCAGCGGCTTAATACAACTAATTACAAGCACAATTCGTTGCACAGGAGCAGATATATACTCAAATGGTACTAGCATTACACATACATACCATGAATGTGGCAAGGATTCTGAGCCTTGTAGCAGCAGCTCTTACAACACTGGAACGGGCACCGCGAGCGCGCAACGTTGCCGCACTGGATGCACTTGGGCTTGTTGAGGCCGCGCAGGTTGGGCTTGGGCATGTCGAAGGCGGACGCCGGGGGCAGCTTCTGCGGCGTCGTCCCATTGCCGTTGGCGACCGCGACCGCGGGTGCCGACGAGTCGCTGGCCGCCTTCCCGCTGGATGCCGGCGACGACGCGGCCATAGCGAACCCGCCGTGAACCACCCCGCAACTCCGCACAGGACCAGCGGTTGGGATTCCGGGGAACCGGAGGCCTCGACGGCGGCGGTGCTCCGGCGAGCTAGGGTTTCTTCTTTTTTTTTTCTTTTGTGTCTCTCCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa08LNT0396900.1 | 8 | 1650704 | C | T |
| Osa08LNT0396900.1 | 8 | 1650076 | A | T |
| Osa08LNT0396900.1 | 8 | 1650532 | T | C |
| Osa08LNT0396900.1 | 8 | 1651083 | G | A |
| Osa08LNT0396900.1 | 8 | 1651144 | C | G |
| Osa08LNT0396900.1 | 8 | 1651406 | A | G |
| Osa08LNT0396900.1 | 8 | 1650513 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa08LNT0396900.1 | osa-miR5540 | Cleavage | 5.0 | 13.417 | 1 | 21 |
| Osa08LNT0396900.1 | osa-miR5544 | Cleavage | 5.0 | 16.818 | 1 | 22 |
| Osa08LNT0396900.1 | osa-miR5806 | Cleavage | 5.0 | 15.135 | 1 | 21 |
| Osa08LNT0396900.1 | osa-miR5831 | Cleavage | 4.5 | 16.725 | 1 | 24 |
| Osa08LNT0396900.1 | osa-miR166h-5p | Translation | 4.0 | 11.06 | 1 | 21 |
| Osa08LNT0396900.1 | osa-miR820a | Cleavage | 5.0 | 13.13 | 1 | 21 |
| Osa08LNT0396900.1 | osa-miR820b | Cleavage | 5.0 | 13.13 | 1 | 21 |
| Osa08LNT0396900.1 | osa-miR820c | Cleavage | 5.0 | 13.13 | 1 | 21 |
| Osa08LNT0396900.1 | osa-miR1858a | Translation | 4.0 | 19.67 | 1 | 21 |
| Osa08LNT0396900.1 | osa-miR1858a | Translation | 5.0 | 11.28 | 1 | 21 |
| Osa08LNT0396900.1 | osa-miR1858a | Translation | 4.5 | 16.349 | 1 | 21 |
| Osa08LNT0396900.1 | osa-miR1858b | Translation | 4.0 | 19.67 | 1 | 21 |
| Osa08LNT0396900.1 | osa-miR1858b | Translation | 5.0 | 11.28 | 1 | 21 |
| Osa08LNT0396900.1 | osa-miR1858b | Translation | 4.5 | 16.349 | 1 | 21 |
| Osa08LNT0396900.1 | osa-miR1871 | Cleavage | 4.5 | 11.192 | 1 | 24 |
| Osa08LNT0396900.1 | osa-miR827 | Cleavage | 5.0 | 24.407 | 1 | 21 |
| Osa08LNT0396900.1 | osa-miR2864.1 | Translation | 4.0 | 17.839 | 1 | 21 |
| Osa08LNT0396900.1 | osa-miR2867-5p | Translation | 3.5 | 24.788 | 1 | 22 |
| Osa08LNT0396900.1 | osa-miR2922 | Cleavage | 5.0 | 16.126 | 1 | 20 |
| Osa08LNT0396900.1 | osa-miR5077 | Cleavage | 3.5 | 23.71 | 1 | 19 |
| Osa08LNT0396900.1 | osa-miR5490 | Cleavage | 5.0 | 11.364 | 1 | 21 |
| Osa08LNT0396900.1 | osa-miR5494 | Cleavage | 5.0 | 9.134 | 1 | 21 |
| Osa08LNT0396900.1 | osa-miR5496 | Translation | 5.0 | 24.162 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa08LNT0396900.1 | 8 | nan | Resistance or Tolerance | Other soil stress tolerance | C390 | C1121 |
| Osa08LNT0396900.1 | 8 | nan | Resistance or Tolerance | Drought tolerance | RM407 | RM38 |
| Osa08LNT0396900.1 | 8 | qDTH8 | Physiological trait | Flowering | R1943 | R2976 |
| Osa08LNT0396900.1 | 8 | qPL8 | Morphological trait | Panicle/flower | R1943 | R2976 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)